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Items: 1 to 20 of 76

1.

Phosphorylation of EZH2 by AMPK Suppresses PRC2 Methyltransferase Activity and Oncogenic Function.

Wan L, Xu K, Wei Y, Zhang J, Han T, Fry C, Zhang Z, Wang YV, Huang L, Yuan M, Xia W, Chang WC, Huang WC, Liu CL, Chang YC, Liu J, Wu Y, Jin VX, Dai X, Guo J, Liu J, Jiang S, Li J, Asara JM, Brown M, Hung MC, Wei W.

Mol Cell. 2018 Jan 18;69(2):279-291.e5. doi: 10.1016/j.molcel.2017.12.024.

PMID:
29351847
2.

An Introduction to Integrative Genomics and Systems Medicine in Cancer.

Cheng X, Jin VX.

Genes (Basel). 2018 Jan 12;9(1). pii: E37. doi: 10.3390/genes9010037.

3.

Single-Cell RNA-seq Reveals a Subpopulation of Prostate Cancer Cells with Enhanced Cell-Cycle-Related Transcription and Attenuated Androgen Response.

Horning AM, Wang Y, Lin CK, Louie AD, Jadhav RR, Hung CN, Wang CM, Lin CL, Kirma NB, Liss MA, Kumar AP, Sun L, Liu Z, Chao WT, Wang Q, Jin VX, Chen CL, Huang TH.

Cancer Res. 2018 Feb 15;78(4):853-864. doi: 10.1158/0008-5472.CAN-17-1924. Epub 2017 Dec 12.

PMID:
29233929
4.

Advances in Genomic Profiling and Analysis of 3D Chromatin Structure and Interaction.

Tang B, Cheng X, Xi Y, Chen Z, Zhou Y, Jin VX.

Genes (Basel). 2017 Sep 8;8(9). pii: E223. doi: 10.3390/genes8090223. Review.

5.

Interferon-Stimulated Genes Are Transcriptionally Repressed by PR in Breast Cancer.

Walter KR, Goodman ML, Singhal H, Hall JA, Li T, Holloran SM, Trinca GM, Gibson KA, Jin VX, Greene GL, Hagan CR.

Mol Cancer Res. 2017 Oct;15(10):1331-1340. doi: 10.1158/1541-7786.MCR-17-0180. Epub 2017 Jul 6.

PMID:
28684637
6.

Attenuation of RNA polymerase II pausing mitigates BRCA1-associated R-loop accumulation and tumorigenesis.

Zhang X, Chiang HC, Wang Y, Zhang C, Smith S, Zhao X, Nair SJ, Michalek J, Jatoi I, Lautner M, Oliver B, Wang H, Petit A, Soler T, Brunet J, Mateo F, Angel Pujana M, Poggi E, Chaldekas K, Isaacs C, Peshkin BN, Ochoa O, Chedin F, Theoharis C, Sun LZ, Curiel TJ, Elledge R, Jin VX, Hu Y, Li R.

Nat Commun. 2017 Jun 26;8:15908. doi: 10.1038/ncomms15908.

7.
8.

DNA Methylation Targets Influenced by Bisphenol A and/or Genistein Are Associated with Survival Outcomes in Breast Cancer Patients.

Jadhav RR, Santucci-Pereira J, Wang YV, Liu J, Nguyen TD, Wang J, Jenkins S, Russo J, Huang TH, Jin VX, Lamartiniere CA.

Genes (Basel). 2017 May 15;8(5). pii: E144. doi: 10.3390/genes8050144.

9.
10.

Integrative analysis identifies targetable CREB1/FoxA1 transcriptional co-regulation as a predictor of prostate cancer recurrence.

Sunkel B, Wu D, Chen Z, Wang CM, Liu X, Ye Z, Horning AM, Liu J, Mahalingam D, Lopez-Nicora H, Lin CL, Goodfellow PJ, Clinton SK, Jin VX, Chen CL, Huang TH, Wang Q.

Nucleic Acids Res. 2017 Jun 20;45(11):6993. doi: 10.1093/nar/gkx282. No abstract available.

11.

COPAR: A ChIP-Seq Optimal Peak Analyzer.

Tang B, Wang X, Jin VX.

Biomed Res Int. 2017;2017:5346793. doi: 10.1155/2017/5346793. Epub 2017 Mar 5.

12.

EGFR-Dependent Regulated Intramembrane Proteolysis of EpCAM-Response.

Hsu YT, Osmulski P, Wang Y, Huang YW, Liu L, Ruan J, Jin VX, Kirma NB, Gaczynska ME, Huang TH.

Cancer Res. 2017 Apr 1;77(7):1777. doi: 10.1158/0008-5472.CAN-16-3440. Epub 2017 Mar 22. No abstract available.

PMID:
28330931
13.

Inference of hierarchical regulatory network of TCF7L2 binding sites in MCF7 cell line.

Wang Y, Wang R, Jin VX.

Int J Comput Biol Drug Des. 2016;9(1-2):25-53. doi: 10.1504/IJCBDD.2016.074990.

14.

Statistical challenges in analyzing methylation and long-range chromosomal interaction data.

Qin Z, Li B, Conneely KN, Wu H, Hu M, Ayyala D, Park Y, Jin VX, Zhang F, Zhang H, Li L, Lin S.

Stat Biosci. 2016 Oct;8(2):284-309. doi: 10.1007/s12561-016-9145-0. Epub 2016 Mar 7.

15.

Methyl-binding DNA capture Sequencing for Patient Tissues.

Jadhav RR, Wang YV, Hsu YT, Liu J, Garcia D, Lai Z, Huang TH, Jin VX.

J Vis Exp. 2016 Oct 31;(116). doi: 10.3791/54131.

16.
17.

EpCAM-Regulated Transcription Exerts Influences on Nanomechanical Properties of Endometrial Cancer Cells That Promote Epithelial-to-Mesenchymal Transition.

Hsu YT, Osmulski P, Wang Y, Huang YW, Liu L, Ruan J, Jin VX, Kirma NB, Gaczynska ME, Huang TH.

Cancer Res. 2016 Nov 1;76(21):6171-6182. Epub 2016 Aug 28. Erratum in: Cancer Res. 2017 Apr 1;77(7):1778.

18.

Genome-wide analysis reveals positional-nucleosome-oriented binding pattern of pioneer factor FOXA1.

Ye Z, Chen Z, Sunkel B, Frietze S, Huang TH, Wang Q, Jin VX.

Nucleic Acids Res. 2016 Sep 19;44(16):7540-54. doi: 10.1093/nar/gkw659. Epub 2016 Jul 25.

19.

Genetic suppression reveals DNA repair-independent antagonism between BRCA1 and COBRA1 in mammary gland development.

Nair SJ, Zhang X, Chiang HC, Jahid MJ, Wang Y, Garza P, April C, Salathia N, Banerjee T, Alenazi FS, Ruan J, Fan JB, Parvin JD, Jin VX, Hu Y, Li R.

Nat Commun. 2016 Mar 4;7:10913. doi: 10.1038/ncomms10913.

20.

Roles of Distal and Genic Methylation in the Development of Prostate Tumorigenesis Revealed by Genome-wide DNA Methylation Analysis.

Wang Y, Jadhav RR, Liu J, Wilson D, Chen Y, Thompson IM, Troyer DA, Hernandez J, Shi H, Leach RJ, Huang TH, Jin VX.

Sci Rep. 2016 Feb 29;6:22051. doi: 10.1038/srep22051.

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