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Items: 1 to 20 of 98

1.

Molecular and Morphological Investigations of the Stauros-bearing, Raphid Pennate Diatoms (Bacillariophyceae): Craspedostauros E.J. Cox, and Staurotropis T.B.B. Paddock, and their Relationship to the Rest of the Mastogloiales.

Ashworth MP, Lobban CS, Witkowski A, Theriot EC, Sabir MJ, Baeshen MN, Hajarah NH, Baeshen NA, Sabir JS, Jansen RK.

Protist. 2017 Feb;168(1):48-70. doi: 10.1016/j.protis.2016.11.001.

PMID:
28043007
2.

Expansion of inverted repeat does not decrease substitution rates in Pelargonium plastid genomes.

Weng ML, Ruhlman TA, Jansen RK.

New Phytol. 2017 Apr;214(2):842-851. doi: 10.1111/nph.14375.

PMID:
27991660
3.

Analysis of transcriptional response to heat stress in Rhazya stricta.

Obaid AY, Sabir JS, Atef A, Liu X, Edris S, El-Domyati FM, Mutwakil MZ, Gadalla NO, Hajrah NH, Al-Kordy MA, Hall N, Bahieldin A, Jansen RK.

BMC Plant Biol. 2016 Nov 14;16(1):252.

4.

Code Gray.

Jansen RK.

Anesthesiology. 2017 Feb;126(2):346-347. doi: 10.1097/ALN.0000000000001365. No abstract available.

PMID:
27662228
5.

The nuclear genome of Rhazya stricta and the evolution of alkaloid diversity in a medically relevant clade of Apocynaceae.

Sabir JS, Jansen RK, Arasappan D, Calderon V, Noutahi E, Zheng C, Park S, Sabir MJ, Baeshen MN, Hajrah NH, Khiyami MA, Baeshen NA, Obaid AY, Al-Malki AL, Sankoff D, El-Mabrouk N, Ruhlman TA.

Sci Rep. 2016 Sep 22;6:33782. doi: 10.1038/srep33782.

6.

Variable presence of the inverted repeat and plastome stability in Erodium.

Blazier JC, Jansen RK, Mower JP, Govindu M, Zhang J, Weng ML, Ruhlman TA.

Ann Bot. 2016 Jun;117(7):1209-20. doi: 10.1093/aob/mcw065.

PMID:
27192713
7.

Plastid-Nuclear Interaction and Accelerated Coevolution in Plastid Ribosomal Genes in Geraniaceae.

Weng ML, Ruhlman TA, Jansen RK.

Genome Biol Evol. 2016 Jun 27;8(6):1824-38. doi: 10.1093/gbe/evw115.

8.

Divergence of RNA polymerase α subunits in angiosperm plastid genomes is mediated by genomic rearrangement.

Blazier JC, Ruhlman TA, Weng ML, Rehman SK, Sabir JS, Jansen RK.

Sci Rep. 2016 Apr 18;6:24595. doi: 10.1038/srep24595.

9.

Coevolution between Nuclear-Encoded DNA Replication, Recombination, and Repair Genes and Plastid Genome Complexity.

Zhang J, Ruhlman TA, Sabir JS, Blazier JC, Weng ML, Park S, Jansen RK.

Genome Biol Evol. 2016 Feb 17;8(3):622-34. doi: 10.1093/gbe/evw033.

10.

Mimosoid legume plastome evolution: IR expansion, tandem repeat expansions, and accelerated rate of evolution in clpP.

Dugas DV, Hernandez D, Koenen EJ, Schwarz E, Straub S, Hughes CE, Jansen RK, Nageswara-Rao M, Staats M, Trujillo JT, Hajrah NH, Alharbi NS, Al-Malki AL, Sabir JS, Bailey CD.

Sci Rep. 2015 Nov 23;5:16958. doi: 10.1038/srep16958.

11.

Sources of inversion variation in the small single copy (SSC) region of chloroplast genomes.

Walker JF, Jansen RK, Zanis MJ, Emery NC.

Am J Bot. 2015 Nov;102(11):1751-2. doi: 10.3732/ajb.1500299. No abstract available.

12.

New Insights into Plagiogrammaceae (Bacillariophyta) Based on Multigene Phylogenies and Morphological Characteristics with the Description of a New Genus and Three New Species.

Li CL, Ashworth MP, Witkowski A, Dąbek P, Medlin LK, Kooistra WH, Sato S, Zgłobicka I, Kurzydłowski KJ, Theriot EC, Sabir JS, Khiyami MA, Mutwakil MH, Sabir MJ, Alharbi NS, Hajarah NH, Qing S, Jansen RK.

PLoS One. 2015 Oct 14;10(10):e0139300. doi: 10.1371/journal.pone.0139300.

13.

Metabolomic Profiling of 13 Diatom Cultures and Their Adaptation to Nitrate-Limited Growth Conditions.

Bromke MA, Sabir JS, Alfassi FA, Hajarah NH, Kabli SA, Al-Malki AL, Ashworth MP, Méret M, Jansen RK, Willmitzer L.

PLoS One. 2015 Oct 6;10(10):e0138965. doi: 10.1371/journal.pone.0138965.

14.

Dynamic evolution of Geranium mitochondrial genomes through multiple horizontal and intracellular gene transfers.

Park S, Grewe F, Zhu A, Ruhlman TA, Sabir J, Mower JP, Jansen RK.

New Phytol. 2015 Oct;208(2):570-83. doi: 10.1111/nph.13467.

15.

NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.

Ruhlman TA, Chang WJ, Chen JJ, Huang YT, Chan MT, Zhang J, Liao DC, Blazier JC, Jin X, Shih MC, Jansen RK, Lin CS.

BMC Plant Biol. 2015 Apr 11;15:100. doi: 10.1186/s12870-015-0484-7.

16.

RNA-Seq analysis of the wild barley (H. spontaneum) leaf transcriptome under salt stress.

Bahieldin A, Atef A, Sabir JS, Gadalla NO, Edris S, Alzohairy AM, Radhwan NA, Baeshen MN, Ramadan AM, Eissa HF, Hassan SM, Baeshen NA, Abuzinadah O, Al-Kordy MA, El-Domyati FM, Jansen RK.

C R Biol. 2015 May;338(5):285-97. doi: 10.1016/j.crvi.2015.03.010.

PMID:
25882349
17.

Dissecting signal and noise in diatom chloroplast protein encoding genes with phylogenetic information profiling.

Theriot EC, Ashworth MP, Nakov T, Ruck E, Jansen RK.

Mol Phylogenet Evol. 2015 Aug;89:28-36. doi: 10.1016/j.ympev.2015.03.012.

PMID:
25848969
18.

Coordinated rates of evolution between interacting plastid and nuclear genes in Geraniaceae.

Zhang J, Ruhlman TA, Sabir J, Blazier JC, Jansen RK.

Plant Cell. 2015 Mar;27(3):563-73. doi: 10.1105/tpc.114.134353.

19.
20.

Corrected sequence of the wheat plastid genome.

Bahieldin A, Al-Kordy MA, Shokry AM, Gadalla NO, Al-Hejin AM, Sabir JS, Hassan SM, Al-Ahmadi AA, Schwarz EN, Eissa HF, El-Domyati FM, Jansen RK.

C R Biol. 2014 Sep;337(9):499-502. doi: 10.1016/j.crvi.2014.07.001.

PMID:
25242688

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