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Items: 1 to 20 of 22

1.

Bioinformatic analysis of bacteria and host cell dual RNA-sequencing experiments.

Marsh JW, Hayward RJ, Shetty AC, Mahurkar A, Humphrys MS, Myers GSA.

Brief Bioinform. 2017 May 23. doi: 10.1093/bib/bbx043. [Epub ahead of print]

PMID:
28535295
2.

Distinct Effects of the Cervicovaginal Microbiota and Herpes Simplex Type 2 Infection on Female Genital Tract Immunology.

Shannon B, Gajer P, Yi TJ, Ma B, Humphrys MS, Thomas-Pavanel J, Chieza L, Janakiram P, Saunders M, Tharao W, Huibner S, Shahabi K, Ravel J, Kaul R.

J Infect Dis. 2017 May 1;215(9):1366-1375. doi: 10.1093/infdis/jix088.

PMID:
28201724
3.

Association of HPV infection and clearance with cervicovaginal immunology and the vaginal microbiota.

Shannon B, Yi TJ, Perusini S, Gajer P, Ma B, Humphrys MS, Thomas-Pavanel J, Chieza L, Janakiram P, Saunders M, Tharao W, Huibner S, Shahabi K, Ravel J, Rebbapragada A, Kaul R.

Mucosal Immunol. 2017 Jan 25. doi: 10.1038/mi.2016.129. [Epub ahead of print]

PMID:
28120845
4.

The effect of cigarette smoking on the oral and nasal microbiota.

Yu G, Phillips S, Gail MH, Goedert JJ, Humphrys MS, Ravel J, Ren Y, Caporaso NE.

Microbiome. 2017 Jan 17;5(1):3. doi: 10.1186/s40168-016-0226-6.

5.

Evaluation of Buccal Cell Samples for Studies of Oral Microbiota.

Yu G, Phillips S, Gail MH, Goedert JJ, Humphrys M, Ravel J, Ren Y, Caporaso NE.

Cancer Epidemiol Biomarkers Prev. 2017 Feb;26(2):249-253. doi: 10.1158/1055-9965.EPI-16-0538. Epub 2016 Oct 21.

PMID:
27770008
6.

Characterizing human lung tissue microbiota and its relationship to epidemiological and clinical features.

Yu G, Gail MH, Consonni D, Carugno M, Humphrys M, Pesatori AC, Caporaso NE, Goedert JJ, Ravel J, Landi MT.

Genome Biol. 2016 Jul 28;17(1):163. doi: 10.1186/s13059-016-1021-1.

7.

Phylogenetic analysis of human Chlamydia pneumoniae strains reveals a distinct Australian indigenous clade that predates European exploration of the continent.

Roulis E, Bachmann N, Humphrys M, Myers G, Huston W, Polkinghorne A, Timms P.

BMC Genomics. 2015 Dec 22;16:1094. doi: 10.1186/s12864-015-2281-y.

8.

Enhanced Trapping of HIV-1 by Human Cervicovaginal Mucus Is Associated with Lactobacillus crispatus-Dominant Microbiota.

Nunn KL, Wang YY, Harit D, Humphrys MS, Ma B, Cone R, Ravel J, Lai SK.

MBio. 2015 Oct 6;6(5):e01084-15. doi: 10.1128/mBio.01084-15.

9.

Chlamydia caviae infection alters abundance but not composition of the guinea pig vaginal microbiota.

Neuendorf E, Gajer P, Bowlin AK, Marques PX, Ma B, Yang H, Fu L, Humphrys MS, Forney LJ, Myers GS, Bavoil PM, Rank RG, Ravel J.

Pathog Dis. 2015 Jun;73(4). pii: ftv019. doi: 10.1093/femspd/ftv019. Epub 2015 Mar 10.

10.

Environmental surveillance for toxigenic Vibrio cholerae in surface waters of Haiti.

Kahler AM, Haley BJ, Chen A, Mull BJ, Tarr CL, Turnsek M, Katz LS, Humphrys MS, Derado G, Freeman N, Boncy J, Colwell RR, Huq A, Hill VR.

Am J Trop Med Hyg. 2015 Jan;92(1):118-25. doi: 10.4269/ajtmh.13-0601. Epub 2014 Nov 10.

11.

"Stocking effect" in lymphoscintigraphy.

Keramida G, Humphrys M, Ryan N, Peters AM.

Lymphat Res Biol. 2014 Sep;12(3):194-6. doi: 10.1089/lrb.2014.0013.

PMID:
25229436
12.

Draft Genome Sequences of Nine Enteropathogenic Escherichia coli Strains from Kenya.

Hazen TH, Humphrys MS, Ochieng JB, Parsons M, Bopp CA, O'Reilly CE, Mintz E, Rasko DA.

Genome Announc. 2014 Jun 12;2(3). pii: e00582-14. doi: 10.1128/genomeA.00582-14.

13.

Genome Sequence of Chlamydia suis MD56, Isolated from the Conjunctiva of a Weaned Piglet.

Donati M, Huot-Creasy H, Humphrys M, Di Paolo M, Di Francesco A, Myers GS.

Genome Announc. 2014 May 8;2(3). pii: e00425-14. doi: 10.1128/genomeA.00425-14.

14.

Simultaneous transcriptional profiling of bacteria and their host cells.

Humphrys MS, Creasy T, Sun Y, Shetty AC, Chibucos MC, Drabek EF, Fraser CM, Farooq U, Sengamalay N, Ott S, Shou H, Bavoil PM, Mahurkar A, Myers GS.

PLoS One. 2013 Dec 4;8(12):e80597. doi: 10.1371/journal.pone.0080597. eCollection 2013.

15.

US outbreak of human Salmonella infections associated with aquatic frogs, 2008-2011.

Mettee Zarecki SL, Bennett SD, Hall J, Yaeger J, Lujan K, Adams-Cameron M, Winpisinger Quinn K, Brenden R, Biggerstaff G, Hill VR, Sholtes K, Garrett NM, Lafon PC, Barton Behravesh C, Sodha SV; Salmonella Typhimurium Outbreak Investigation Team.

Pediatrics. 2013 Apr;131(4):724-31. doi: 10.1542/peds.2012-2031. Epub 2013 Mar 11.

16.

Neurologic manifestations associated with an outbreak of typhoid fever, Malawi--Mozambique, 2009: an epidemiologic investigation.

Sejvar J, Lutterloh E, Naiene J, Likaka A, Manda R, Nygren B, Monroe S, Khaila T, Lowther SA, Capewell L, Date K, Townes D, Redwood Y, Schier J, Barr BT, Demby A, Mallewa M, Kampondeni S, Blount B, Humphrys M, Talkington D, Armstrong GL, Mintz E.

PLoS One. 2012;7(12):e46099. doi: 10.1371/journal.pone.0046099. Epub 2012 Dec 3.

17.

Multidrug-resistant typhoid fever with neurologic findings on the Malawi-Mozambique border.

Lutterloh E, Likaka A, Sejvar J, Manda R, Naiene J, Monroe SS, Khaila T, Chilima B, Mallewa M, Kampondeni SD, Lowther SA, Capewell L, Date K, Townes D, Redwood Y, Schier JG, Nygren B, Tippett Barr B, Demby A, Phiri A, Lungu R, Kaphiyo J, Humphrys M, Talkington D, Joyce K, Stockman LJ, Armstrong GL, Mintz E.

Clin Infect Dis. 2012 Apr;54(8):1100-6. doi: 10.1093/cid/cis012. Epub 2012 Feb 22.

PMID:
22357702
18.

Characterization of toxigenic Vibrio cholerae from Haiti, 2010-2011.

Talkington D, Bopp C, Tarr C, Parsons MB, Dahourou G, Freeman M, Joyce K, Turnsek M, Garrett N, Humphrys M, Gomez G, Stroika S, Boncy J, Ochieng B, Oundo J, Klena J, Smith A, Keddy K, Gerner-Smidt P.

Emerg Infect Dis. 2011 Nov;17(11):2122-9. doi: 10.3201/eid1711.110805.

19.

Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa.

Reimer AR, Van Domselaar G, Stroika S, Walker M, Kent H, Tarr C, Talkington D, Rowe L, Olsen-Rasmussen M, Frace M, Sammons S, Dahourou GA, Boncy J, Smith AM, Mabon P, Petkau A, Graham M, Gilmour MW, Gerner-Smidt P; V. cholerae Outbreak Genomics Task Force.

Emerg Infect Dis. 2011 Nov;17(11):2113-21. doi: 10.3201/eid1711.110794.

20.

Salmonella typhimurium infections associated with peanut products.

Cavallaro E, Date K, Medus C, Meyer S, Miller B, Kim C, Nowicki S, Cosgrove S, Sweat D, Phan Q, Flint J, Daly ER, Adams J, Hyytia-Trees E, Gerner-Smidt P, Hoekstra RM, Schwensohn C, Langer A, Sodha SV, Rogers MC, Angulo FJ, Tauxe RV, Williams IT, Behravesh CB; Salmonella Typhimurium Outbreak Investigation Team.

N Engl J Med. 2011 Aug 18;365(7):601-10. doi: 10.1056/NEJMoa1011208.

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