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Items: 20


Advances in ecological genomics in forest trees and applications to genetic resources conservation and breeding.

Holliday JA, Aitken SN, Cooke JE, Fady B, González-Martínez SC, Heuertz M, Jaramillo-Correa JP, Lexer C, Staton M, Whetten RW, Plomion C.

Mol Ecol. 2017 Feb;26(3):706-717. doi: 10.1111/mec.13963. Epub 2017 Jan 27.


Convergent local adaptation to climate in distantly related conifers.

Yeaman S, Hodgins KA, Lotterhos KE, Suren H, Nadeau S, Degner JC, Nurkowski KA, Smets P, Wang T, Gray LK, Liepe KJ, Hamann A, Holliday JA, Whitlock MC, Rieseberg LH, Aitken SN.

Science. 2016 Sep 23;353(6306):1431-1433.


Recombination Rate Variation, Hitchhiking, and Demographic History Shape Deleterious Load in Poplar.

Zhang M, Zhou L, Bawa R, Suren H, Holliday JA.

Mol Biol Evol. 2016 Nov;33(11):2899-2910. Epub 2016 Aug 10.


Exome capture from the spruce and pine giga-genomes.

Suren H, Hodgins KA, Yeaman S, Nurkowski KA, Smets P, Rieseberg LH, Aitken SN, Holliday JA.

Mol Ecol Resour. 2016 Sep;16(5):1136-46. doi: 10.1111/1755-0998.12570. Epub 2016 Aug 5.


Evidence for extensive parallelism but divergent genomic architecture of adaptation along altitudinal and latitudinal gradients in Populus trichocarpa.

Holliday JA, Zhou L, Bawa R, Zhang M, Oubida RW.

New Phytol. 2016 Feb;209(3):1240-51. doi: 10.1111/nph.13643. Epub 2015 Sep 15.


Partitioning of multivariate phenotypes using regression trees reveals complex patterns of adaptation to climate across the range of black cottonwood (Populus trichocarpa).

Oubida RW, Gantulga D, Zhang M, Zhou L, Bawa R, Holliday JA.

Front Plant Sci. 2015 Mar 27;6:181. doi: 10.3389/fpls.2015.00181. eCollection 2015 Mar 27.


Conservation and divergence of gene expression plasticity following c. 140 million years of evolution in lodgepole pine (Pinus contorta) and interior spruce (Picea glauca×Picea engelmannii).

Yeaman S, Hodgins KA, Suren H, Nurkowski KA, Rieseberg LH, Holliday JA, Aitken SN.

New Phytol. 2014 Jul;203(2):578-91. doi: 10.1111/nph.12819. Epub 2014 Apr 22.


Sequence diversity in coding regions of candidate genes in the glycoalkaloid biosynthetic pathway of wild potato species.

Manrique-Carpintero NC, Tokuhisa JG, Ginzberg I, Holliday JA, Veilleux RE.

G3 (Bethesda). 2013 Sep 4;3(9):1467-79. doi: 10.1534/g3.113.007146.


Evidence for extensive heterotrophic metabolism, antioxidant action, and associated regulatory events during winter hardening in Sitka spruce.

Collakova E, Klumas C, Suren H, Myers E, Heath LS, Holliday JA, Grene R.

BMC Plant Biol. 2013 Apr 30;13:72. doi: 10.1186/1471-2229-13-72.


Targeted enrichment of the black cottonwood (Populus trichocarpa) gene space using sequence capture.

Zhou L, Holliday JA.

BMC Genomics. 2012 Dec 14;13:703. doi: 10.1186/1471-2164-13-703.


Mining and visualization of microarray and metabolomic data reveal extensive cell wall remodeling during winter hardening in Sitka spruce (Picea sitchensis).

Grene R, Klumas C, Suren H, Yang K, Collakova E, Myers E, Heath LS, Holliday JA.

Front Plant Sci. 2012 Oct 29;3:241. doi: 10.3389/fpls.2012.00241. eCollection 2012 Oct 29.


Predicting adaptive phenotypes from multilocus genotypes in Sitka spruce (Picea sitchensis) using random forest.

Holliday JA, Wang T, Aitken S.

G3 (Bethesda). 2012 Sep;2(9):1085-93. doi: 10.1534/g3.112.002733. Epub 2012 Sep 1.


Metabolic dynamics during autumn cold acclimation within and among populations of Sitka spruce (Picea sitchensis).

Dauwe R, Holliday JA, Aitken SN, Mansfield SD.

New Phytol. 2012 Apr;194(1):192-205. doi: 10.1111/j.1469-8137.2011.04027.x. Epub 2012 Jan 16.


Divergent selection and heterogeneous migration rates across the range of Sitka spruce (Picea sitchensis).

Holliday JA, Suren H, Aitken SN.

Proc Biol Sci. 2012 May 7;279(1734):1675-83. doi: 10.1098/rspb.2011.1805. Epub 2011 Nov 23.


Postglacial history of a widespread conifer produces inverse clines in selective neutrality tests.

Holliday JA, Yuen M, Ritland K, Aitken SN.

Mol Ecol. 2010 Sep;19(18):3857-64. doi: 10.1111/j.1365-294X.2010.04767.x.


Widespread, ecologically relevant genetic markers developed from association mapping of climate-related traits in Sitka spruce (Picea sitchensis).

Holliday JA, Ritland K, Aitken SN.

New Phytol. 2010 Oct;188(2):501-14. doi: 10.1111/j.1469-8137.2010.03380.x. Epub 2010 Jul 21.


Adaptation, migration or extirpation: climate change outcomes for tree populations.

Aitken SN, Yeaman S, Holliday JA, Wang T, Curtis-McLane S.

Evol Appl. 2008 Feb;1(1):95-111. doi: 10.1111/j.1752-4571.2007.00013.x.


Global monitoring of autumn gene expression within and among phenotypically divergent populations of Sitka spruce (Picea sitchensis).

Holliday JA, Ralph SG, White R, Bohlmann J, Aitken SN.

New Phytol. 2008;178(1):103-22. doi: 10.1111/j.1469-8137.2007.02346.x. Epub 2008 Jan 10.


Light and electron microscopy of the epithelium of the human true vocal cord.

Holliday JA Jr.

Laryngoscope. 1971 Oct;81(10):1596-601. No abstract available.


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