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Items: 20


Genomic, Biochemical, and Modeling Analyses of Asparagine Synthetases from Wheat.

Xu H, Curtis TY, Powers SJ, Raffan S, Gao R, Huang J, Heiner M, Gilbert DR, Halford NG.

Front Plant Sci. 2018 Jan 15;8:2237. doi: 10.3389/fpls.2017.02237. eCollection 2017.


Snoopy's hybrid simulator: a tool to construct and simulate hybrid biological models.

Herajy M, Liu F, Rohr C, Heiner M.

BMC Syst Biol. 2017 Jul 28;11(1):71. doi: 10.1186/s12918-017-0449-6.


Spatial planning for a green economy: National-level hydrologic ecosystem services priority areas for Gabon.

Goldstein JH, Tallis H, Cole A, Schill S, Martin E, Heiner M, Paiz MC, Aldous A, Apse C, Nickel B.

PLoS One. 2017 Jun 8;12(6):e0179008. doi: 10.1371/journal.pone.0179008. eCollection 2017.


Modeling biological gradient formation: combining partial differential equations and Petri nets.

Bertens LM, Kleijn J, Hille SC, Heiner M, Koutny M, Verbeek FJ.

Nat Comput. 2016;15(4):665-675. Epub 2015 Oct 31.


A model-driven methodology for exploring complex disease comorbidities applied to autism spectrum disorder and inflammatory bowel disease.

Somekh J, Peleg M, Eran A, Koren I, Feiglin A, Demishtein A, Shiloh R, Heiner M, Kong SW, Elazar Z, Kohane I.

J Biomed Inform. 2016 Oct;63:366-378. doi: 10.1016/j.jbi.2016.08.008. Epub 2016 Aug 10.


Fuzzy Stochastic Petri Nets for Modeling Biological Systems with Uncertain Kinetic Parameters.

Liu F, Heiner M, Yang M.

PLoS One. 2016 Feb 24;11(2):e0149674. doi: 10.1371/journal.pone.0149674. eCollection 2016.


Modeling the Offensive-Defensive Interaction and Resulting Outcomes in Basketball.

Lamas L, Santana F, Heiner M, Ugrinowitsch C, Fellingham G.

PLoS One. 2015 Dec 14;10(12):e0144435. doi: 10.1371/journal.pone.0144435. eCollection 2015.


Generation of a variety of stable Influenza A reporter viruses by genetic engineering of the NS gene segment.

Reuther P, Göpfert K, Dudek AH, Heiner M, Herold S, Schwemmle M.

Sci Rep. 2015 Jun 12;5:11346. doi: 10.1038/srep11346.


The RNA-binding protein QKI suppresses cancer-associated aberrant splicing.

Zong FY, Fu X, Wei WJ, Luo YG, Heiner M, Cao LJ, Fang Z, Fang R, Lu D, Ji H, Hui J.

PLoS Genet. 2014 Apr 10;10(4):e1004289. doi: 10.1371/journal.pgen.1004289. eCollection 2014 Apr.


YB-1 binds to CAUC motifs and stimulates exon inclusion by enhancing the recruitment of U2AF to weak polypyrimidine tracts.

Wei WJ, Mu SR, Heiner M, Fu X, Cao LJ, Gong XF, Bindereif A, Hui J.

Nucleic Acids Res. 2012 Sep 1;40(17):8622-36. Epub 2012 Jun 22.


Mediator complex regulates alternative mRNA processing via the MED23 subunit.

Huang Y, Li W, Yao X, Lin QJ, Yin JW, Liang Y, Heiner M, Tian B, Hui J, Wang G.

Mol Cell. 2012 Feb 24;45(4):459-69. doi: 10.1016/j.molcel.2011.12.022. Epub 2012 Jan 19.


A unique transformation from ordinary differential equations to reaction networks.

Soliman S, Heiner M.

PLoS One. 2010 Dec 22;5(12):e14284. doi: 10.1371/journal.pone.0014284.


Structural analysis to determine the core of hypoxia response network.

Heiner M, Sriram K.

PLoS One. 2010 Jan 19;5(1):e8600. doi: 10.1371/journal.pone.0008600.


Proteomic identification of heterogeneous nuclear ribonucleoprotein L as a novel component of SLM/Sam68 Nuclear Bodies.

Rajan P, Dalgliesh C, Bourgeois CF, Heiner M, Emami K, Clark EL, Bindereif A, Stevenin J, Robson CN, Leung HY, Elliott DJ.

BMC Cell Biol. 2009 Nov 13;10:82. doi: 10.1186/1471-2121-10-82.


Auto- and cross-regulation of the hnRNP L proteins by alternative splicing.

Rossbach O, Hung LH, Schreiner S, Grishina I, Heiner M, Hui J, Bindereif A.

Mol Cell Biol. 2009 Mar;29(6):1442-51. doi: 10.1128/MCB.01689-08. Epub 2009 Jan 5.


Is the anti-psychotic, 10-(3-(dimethylamino)propyl)phenothiazine (promazine), a potential drug with which to treat SARS infections? Lack of efficacy of promazine on SARS-CoV replication in a mouse model.

Barnard DL, Day CW, Bailey K, Heiner M, Montgomery R, Lauridsen L, Jung KH, Li JK, Chan PK, Sidwell RW.

Antiviral Res. 2008 Aug;79(2):105-13. doi: 10.1016/j.antiviral.2007.12.005. Epub 2008 Jan 11.


Modularization of biochemical networks based on classification of Petri net t-invariants.

Grafahrend-Belau E, Schreiber F, Heiner M, Sackmann A, Junker BH, Grunwald S, Speer A, Winder K, Koch I.

BMC Bioinformatics. 2008 Feb 8;9:90. doi: 10.1186/1471-2105-9-90.


Diverse roles of hnRNP L in mammalian mRNA processing: a combined microarray and RNAi analysis.

Hung LH, Heiner M, Hui J, Schreiner S, Benes V, Bindereif A.

RNA. 2008 Feb;14(2):284-96. Epub 2007 Dec 11.


Application of Petri net based analysis techniques to signal transduction pathways.

Sackmann A, Heiner M, Koch I.

BMC Bioinformatics. 2006 Nov 2;7:482.


Intronic CA-repeat and CA-rich elements: a new class of regulators of mammalian alternative splicing.

Hui J, Hung LH, Heiner M, Schreiner S, Neumüller N, Reither G, Haas SA, Bindereif A.

EMBO J. 2005 Jun 1;24(11):1988-98. Epub 2005 May 12.

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