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Items: 1 to 20 of 174

1.

Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits.

Wang M, Hancock TP, Chamberlain AJ, Vander Jagt CJ, Pryce JE, Cocks BG, Goddard ME, Hayes BJ.

BMC Genomics. 2018 May 24;19(1):395. doi: 10.1186/s12864-018-4800-0.

2.

The cost-benefit of genomic testing of heifers and using sexed semen in pasture-based dairy herds.

Newton JE, Hayes BJ, Pryce JE.

J Dairy Sci. 2018 Apr 25. pii: S0022-0302(18)30375-8. doi: 10.3168/jds.2017-13476. [Epub ahead of print]

3.

Insights into population genetics and evolution of polyploids and their ancestors.

Jighly A, Lin Z, Forster JW, Spangenberg GC, Hayes BJ, Daetwyler HD.

Mol Ecol Resour. 2018 Apr 26. doi: 10.1111/1755-0998.12896. [Epub ahead of print]

PMID:
29697892
4.

An initiator codon mutation in SDE2 causes recessive embryonic lethality in Holstein cattle.

Fritz S, Hoze C, Rebours E, Barbat A, Bizard M, Chamberlain A, Escouflaire C, Vander Jagt C, Boussaha M, Grohs C, Allais-Bonnet A, Philippe M, Vallée A, Amigues Y, Hayes BJ, Boichard D, Capitan A.

J Dairy Sci. 2018 Apr 18. pii: S0022-0302(18)30360-6. doi: 10.3168/jds.2017-14119. [Epub ahead of print]

PMID:
29680649
5.

Variance explained by whole genome sequence variants in coding and regulatory genome annotations for six dairy traits.

Koufariotis LT, Chen YP, Stothard P, Hayes BJ.

BMC Genomics. 2018 Apr 5;19(1):237. doi: 10.1186/s12864-018-4617-x.

6.

Responses of dairy cows with divergent residual feed intake as calves to metabolic challenges during midlactation and the nonlactating period.

DiGiacomo K, Norris E, Dunshea FR, Hayes BJ, Marett LC, Wales WJ, Leury BJ.

J Dairy Sci. 2018 Mar 28. pii: S0022-0302(18)30272-8. doi: 10.3168/jds.2017-12569. [Epub ahead of print]

PMID:
29605310
7.

A multi-trait Bayesian method for mapping QTL and genomic prediction.

Kemper KE, Bowman PJ, Hayes BJ, Visscher PM, Goddard ME.

Genet Sel Evol. 2018 Mar 24;50(1):10. doi: 10.1186/s12711-018-0377-y.

8.

Engineering a multicellular vascular niche to model hematopoietic cell trafficking.

Kotha SS, Hayes BJ, Phong KT, Redd MA, Bomsztyk K, Ramakrishnan A, Torok-Storb B, Zheng Y.

Stem Cell Res Ther. 2018 Mar 23;9(1):77. doi: 10.1186/s13287-018-0808-2.

9.

Multibreed genomic prediction using multitrait genomic residual maximum likelihood and multitask Bayesian variable selection.

Calus MPL, Goddard ME, Wientjes YCJ, Bowman PJ, Hayes BJ.

J Dairy Sci. 2018 May;101(5):4279-4294. doi: 10.3168/jds.2017-13366. Epub 2018 Mar 15.

PMID:
29550121
10.

Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals.

Bouwman AC, Daetwyler HD, Chamberlain AJ, Ponce CH, Sargolzaei M, Schenkel FS, Sahana G, Govignon-Gion A, Boitard S, Dolezal M, Pausch H, Brøndum RF, Bowman PJ, Thomsen B, Guldbrandtsen B, Lund MS, Servin B, Garrick DJ, Reecy J, Vilkki J, Bagnato A, Wang M, Hoff JL, Schnabel RD, Taylor JF, Vinkhuyzen AAE, Panitz F, Bendixen C, Holm LE, Gredler B, Hozé C, Boussaha M, Sanchez MP, Rocha D, Capitan A, Tribout T, Barbat A, Croiseau P, Drögemüller C, Jagannathan V, Vander Jagt C, Crowley JJ, Bieber A, Purfield DC, Berry DP, Emmerling R, Götz KU, Frischknecht M, Russ I, Sölkner J, Van Tassell CP, Fries R, Stothard P, Veerkamp RF, Boichard D, Goddard ME, Hayes BJ.

Nat Genet. 2018 Mar;50(3):362-367. doi: 10.1038/s41588-018-0056-5. Epub 2018 Feb 19.

PMID:
29459679
11.

Estimated allele substitution effects underlying genomic evaluation models depend on the scaling of allele counts.

Bouwman AC, Hayes BJ, Calus MPL.

Genet Sel Evol. 2017 Oct 30;49(1):79. doi: 10.1186/s12711-017-0355-9.

12.

Multi-breed genomic prediction using Bayes R with sequence data and dropping variants with a small effect.

van den Berg I, Bowman PJ, MacLeod IM, Hayes BJ, Wang T, Bolormaa S, Goddard ME.

Genet Sel Evol. 2017 Sep 21;49(1):70. doi: 10.1186/s12711-017-0347-9.

13.

Rapid Discovery of De Novo Deleterious Mutations in Cattle Enhances the Value of Livestock as Model Species.

Bourneuf E, Otz P, Pausch H, Jagannathan V, Michot P, Grohs C, Piton G, Ammermüller S, Deloche MC, Fritz S, Leclerc H, Péchoux C, Boukadiri A, Hozé C, Saintilan R, Créchet F, Mosca M, Segelke D, Guillaume F, Bouet S, Baur A, Vasilescu A, Genestout L, Thomas A, Allais-Bonnet A, Rocha D, Colle MA, Klopp C, Esquerré D, Wurmser C, Flisikowski K, Schwarzenbacher H, Burgstaller J, Brügmann M, Dietschi E, Rudolph N, Freick M, Barbey S, Fayolle G, Danchin-Burge C, Schibler L, Bed'Hom B, Hayes BJ, Daetwyler HD, Fries R, Boichard D, Pin D, Drögemüller C, Capitan A.

Sci Rep. 2017 Sep 13;7(1):11466. doi: 10.1038/s41598-017-11523-3.

14.

Accelerating wheat breeding for end-use quality with multi-trait genomic predictions incorporating near infrared and nuclear magnetic resonance-derived phenotypes.

Hayes BJ, Panozzo J, Walker CK, Choy AL, Kant S, Wong D, Tibbits J, Daetwyler HD, Rochfort S, Hayden MJ, Spangenberg GC.

Theor Appl Genet. 2017 Dec;130(12):2505-2519. doi: 10.1007/s00122-017-2972-7. Epub 2017 Aug 24.

PMID:
28840266
15.

Application of a Bayesian non-linear model hybrid scheme to sequence data for genomic prediction and QTL mapping.

Wang T, Chen YP, MacLeod IM, Pryce JE, Goddard ME, Hayes BJ.

BMC Genomics. 2017 Aug 15;18(1):618. doi: 10.1186/s12864-017-4030-x.

16.

Short communication: Implementation of a breeding value for heat tolerance in Australian dairy cattle.

Nguyen TTT, Bowman PJ, Haile-Mariam M, Nieuwhof GJ, Hayes BJ, Pryce JE.

J Dairy Sci. 2017 Sep;100(9):7362-7367. doi: 10.3168/jds.2017-12898. Epub 2017 Jul 12.

PMID:
28711268
17.

Putative enhancer sites in the bovine genome are enriched with variants affecting complex traits.

Wang M, Hancock TP, MacLeod IM, Pryce JE, Cocks BG, Hayes BJ.

Genet Sel Evol. 2017 Jul 6;49(1):56. doi: 10.1186/s12711-017-0331-4.

18.

Exome sequence genotype imputation in globally diverse hexaploid wheat accessions.

Shi F, Tibbits J, Pasam RK, Kay P, Wong D, Petkowski J, Forrest KL, Hayes BJ, Akhunova A, Davies J, Webb S, Spangenberg GC, Akhunov E, Hayden MJ, Daetwyler HD.

Theor Appl Genet. 2017 Jul;130(7):1393-1404. doi: 10.1007/s00122-017-2895-3. Epub 2017 Apr 4.

PMID:
28378053
19.

Mitigation of inbreeding while preserving genetic gain in genomic breeding programs for outbred plants.

Lin Z, Shi F, Hayes BJ, Daetwyler HD.

Theor Appl Genet. 2017 May;130(5):969-980. doi: 10.1007/s00122-017-2863-y. Epub 2017 Mar 31.

PMID:
28364262
20.

Implementation of 'Goals of Patient Care' medical treatment orders in residential aged care facilities: protocol for a randomised controlled trial.

Martin RS, Hayes BJ, Hutchinson A, Yates P, Lim WK.

BMJ Open. 2017 Mar 10;7(3):e013909. doi: 10.1136/bmjopen-2016-013909.

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