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Items: 1 to 20 of 105

1.

Navigating social and ethical challenges of biobanking for human microbiome research.

Chuong KH, Hwang DM, Tullis DE, Waters VJ, Yau YC, Guttman DS, O'Doherty KC.

BMC Med Ethics. 2017 Jan 11;18(1):1. doi: 10.1186/s12910-016-0160-y.

2.

Oral Vancomycin Followed by Fecal Transplantation Versus Tapering Oral Vancomycin Treatment for Recurrent Clostridium difficile Infection: An Open-Label, Randomized Controlled Trial.

Hota SS, Sales V, Tomlinson G, Salpeter MJ, McGeer A, Coburn B, Guttman DS, Low DE, Poutanen SM.

Clin Infect Dis. 2017 Feb 1;64(3):265-271. doi: 10.1093/cid/ciw731.

PMID:
28011612
3.

Image-Based Quantification of Plant Immunity and Disease.

Laflamme B, Middleton M, Lo T, Desveaux D, Guttman DS.

Mol Plant Microbe Interact. 2016 Dec;29(12):919-924. doi: 10.1094/MPMI-07-16-0129-TA.

PMID:
27996374
4.

Disentangling Interactions in the Microbiome: A Network Perspective.

Layeghifard M, Hwang DM, Guttman DS.

Trends Microbiol. 2016 Dec 1. pii: S0966-842X(16)30185-8. doi: 10.1016/j.tim.2016.11.008. [Epub ahead of print] Review.

PMID:
27916383
5.

NKT Cell-Deficient Mice Harbor an Altered Microbiota That Fuels Intestinal Inflammation during Chemically Induced Colitis.

Selvanantham T, Lin Q, Guo CX, Surendra A, Fieve S, Escalante NK, Guttman DS, Streutker CJ, Robertson SJ, Philpott DJ, Mallevaey T.

J Immunol. 2016 Dec 1;197(11):4464-4472.

PMID:
27799307
6.

Evolution, genomics and epidemiology of Pseudomonas syringae: Challenges in Bacterial Molecular Plant Pathology.

Baltrus DA, McCann HC, Guttman DS.

Mol Plant Pathol. 2017 Jan;18(1):152-168. doi: 10.1111/mpp.12506. Review.

PMID:
27798954
7.

Association of host genome with intestinal microbial composition in a large healthy cohort.

Turpin W, Espin-Garcia O, Xu W, Silverberg MS, Kevans D, Smith MI, Guttman DS, Griffiths A, Panaccione R, Otley A, Xu L, Shestopaloff K, Moreno-Hagelsieb G; GEM Project Research Consortium., Paterson AD, Croitoru K.

Nat Genet. 2016 Nov;48(11):1413-1417. doi: 10.1038/ng.3693.

PMID:
27694960
8.

Gene Slider: sequence logo interactive data-visualization for education and research.

Waese J, Pasha A, Wang TT, van Weringh A, Guttman DS, Provart NJ.

Bioinformatics. 2016 Dec 1;32(23):3670-3672.

PMID:
27522081
9.

A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies.

Thakur S, Guttman DS.

BMC Bioinformatics. 2016 Jun 30;17(1):260. doi: 10.1186/s12859-016-1142-2.

10.

Prophages mediate defense against phage infection through diverse mechanisms.

Bondy-Denomy J, Qian J, Westra ER, Buckling A, Guttman DS, Davidson AR, Maxwell KL.

ISME J. 2016 Dec;10(12):2854-2866. doi: 10.1038/ismej.2016.79.

PMID:
27258950
11.

High fecal IgA is associated with reduced Clostridium difficile colonization in infants.

Bridgman SL, Konya T, Azad MB, Guttman DS, Sears MR, Becker AB, Turvey SE, Mandhane PJ, Subbarao P; CHILD Study Investigators., Scott JA, Field CJ, Kozyrskyj AL.

Microbes Infect. 2016 Sep;18(9):543-9. doi: 10.1016/j.micinf.2016.05.001.

PMID:
27235197
12.

Genomic screens identify a new phytobacterial microbe-associated molecular pattern and the cognate Arabidopsis receptor-like kinase that mediates its immune elicitation.

Mott GA, Thakur S, Smakowska E, Wang PW, Belkhadir Y, Desveaux D, Guttman DS.

Genome Biol. 2016 May 9;17:98. doi: 10.1186/s13059-016-0955-7.

13.

The HopF family of Pseudomonas syringae type III secreted effectors.

Lo T, Koulena N, Seto D, Guttman DS, Desveaux D.

Mol Plant Pathol. 2016 Apr 6. doi: 10.1111/mpp.12412. [Epub ahead of print]

PMID:
27061875
14.

Metabolic Reprogramming by Hexosamine Biosynthetic and Golgi N-Glycan Branching Pathways.

Ryczko MC, Pawling J, Chen R, Abdel Rahman AM, Yau K, Copeland JK, Zhang C, Surendra A, Guttman DS, Figeys D, Dennis JW.

Sci Rep. 2016 Mar 14;6:23043. doi: 10.1038/srep23043.

15.

Phytopathogen Genome Announcement: Draft Genome Sequences of 62 Pseudomonas syringae Type and Pathotype Strains.

Thakur S, Weir BS, Guttman DS.

Mol Plant Microbe Interact. 2016 Apr;29(4):243-6. doi: 10.1094/MPMI-01-16-0013-TA.

PMID:
26883489
16.

Genomic and Gene-Expression Comparisons among Phage-Resistant Type-IV Pilus Mutants of Pseudomonas syringae pathovar phaseolicola.

Sistrom M, Park D, O'Brien HE, Wang Z, Guttman DS, Townsend JP, Turner PE.

PLoS One. 2015 Dec 15;10(12):e0144514. doi: 10.1371/journal.pone.0144514.

17.

Elevated Temperature Differentially Influences Effector-Triggered Immunity Outputs in Arabidopsis.

Menna A, Nguyen D, Guttman DS, Desveaux D.

Front Plant Sci. 2015 Nov 9;6:995. doi: 10.3389/fpls.2015.00995.

18.

Global Analysis of the Fungal Microbiome in Cystic Fibrosis Patients Reveals Loss of Function of the Transcriptional Repressor Nrg1 as a Mechanism of Pathogen Adaptation.

Kim SH, Clark ST, Surendra A, Copeland JK, Wang PW, Ammar R, Collins C, Tullis DE, Nislow C, Hwang DM, Guttman DS, Cowen LE.

PLoS Pathog. 2015 Nov 20;11(11):e1005308. doi: 10.1371/journal.ppat.1005308.

19.

Chronic infection phenotypes of Pseudomonas aeruginosa are associated with failure of eradication in children with cystic fibrosis.

Vidya P, Smith L, Beaudoin T, Yau YC, Clark S, Coburn B, Guttman DS, Hwang DM, Waters V.

Eur J Clin Microbiol Infect Dis. 2016 Jan;35(1):67-74.

PMID:
26492874
20.

Impact of maternal intrapartum antibiotics, method of birth and breastfeeding on gut microbiota during the first year of life: a prospective cohort study.

Azad MB, Konya T, Persaud RR, Guttman DS, Chari RS, Field CJ, Sears MR, Mandhane PJ, Turvey SE, Subbarao P, Becker AB, Scott JA, Kozyrskyj AL; CHILD Study Investigators..

BJOG. 2016 May;123(6):983-93. doi: 10.1111/1471-0528.13601.

PMID:
26412384
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