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Items: 1 to 20 of 151

1.

Protocol for Efficient Cell-Free Synthesis of Cowpea Chlorotic Mottle Virus-Like Particles Containing Heterologous RNAs.

Garmann RF, Knobler CM, Gelbart WM.

Methods Mol Biol. 2018;1776:249-265. doi: 10.1007/978-1-4939-7808-3_17.

PMID:
29869247
2.

The Effect of RNA Secondary Structure on the Self-Assembly of Viral Capsids.

Beren C, Dreesens LL, Liu KN, Knobler CM, Gelbart WM.

Biophys J. 2017 Jul 25;113(2):339-347. doi: 10.1016/j.bpj.2017.06.038. Epub 2017 Jul 12.

PMID:
28711172
3.

Sizes of Long RNA Molecules Are Determined by the Branching Patterns of Their Secondary Structures.

Borodavka A, Singaram SW, Stockley PG, Gelbart WM, Ben-Shaul A, Tuma R.

Biophys J. 2016 Nov 15;111(10):2077-2085. doi: 10.1016/j.bpj.2016.10.014.

4.

Physical Principles in the Self-Assembly of a Simple Spherical Virus.

Garmann RF, Comas-Garcia M, Knobler CM, Gelbart WM.

Acc Chem Res. 2016 Jan 19;49(1):48-55. doi: 10.1021/acs.accounts.5b00350. Epub 2015 Dec 10.

PMID:
26653769
5.

Role of RNA Branchedness in the Competition for Viral Capsid Proteins.

Singaram SW, Garmann RF, Knobler CM, Gelbart WM, Ben-Shaul A.

J Phys Chem B. 2015 Nov 5;119(44):13991-4002. doi: 10.1021/acs.jpcb.5b06445. Epub 2015 Oct 19.

PMID:
26435053
6.

Controlling the extent of viral genome release by a combination of osmotic stress and polyvalent cations.

Jin Y, Knobler CM, Gelbart WM.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Aug;92(2):022708. Epub 2015 Aug 13.

PMID:
26382433
7.

Bacteriophage P22 ejects all of its internal proteins before its genome.

Jin Y, Sdao SM, Dover JA, Porcek NB, Knobler CM, Gelbart WM, Parent KN.

Virology. 2015 Nov;485:128-34. doi: 10.1016/j.virol.2015.07.006. Epub 2015 Aug 1.

8.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM; FlyBase Consortium.

G3 (Bethesda). 2015 Jun 24;5(8):1721-36. doi: 10.1534/g3.115.018929.

9.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM; FlyBase Consortium.

G3 (Bethesda). 2015 Jun 24;5(8):1737-49. doi: 10.1534/g3.115.018937.

10.

DNA-peptide complexes: Regulation of interferon production.

Gelbart WM.

Nat Mater. 2015 Jul;14(7):661-2. doi: 10.1038/nmat4332. No abstract available.

PMID:
26099713
11.

A Simple RNA-DNA Scaffold Templates the Assembly of Monofunctional Virus-Like Particles.

Garmann RF, Sportsman R, Beren C, Manoharan VN, Knobler CM, Gelbart WM.

J Am Chem Soc. 2015 Jun 24;137(24):7584-7. doi: 10.1021/jacs.5b03770. Epub 2015 Jun 10.

12.

Visualizing the global secondary structure of a viral RNA genome with cryo-electron microscopy.

Garmann RF, Gopal A, Athavale SS, Knobler CM, Gelbart WM, Harvey SC.

RNA. 2015 May;21(5):877-86. doi: 10.1261/rna.047506.114. Epub 2015 Mar 9.

13.

Viral ssRNAs are indeed compact.

Ben-Shaul A, Gelbart WM.

Biophys J. 2015 Jan 6;108(1):14-6. doi: 10.1016/j.bpj.2014.11.010. No abstract available.

14.

FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations.

dos Santos G, Schroeder AJ, Goodman JL, Strelets VB, Crosby MA, Thurmond J, Emmert DB, Gelbart WM; FlyBase Consortium.

Nucleic Acids Res. 2015 Jan;43(Database issue):D690-7. doi: 10.1093/nar/gku1099. Epub 2014 Nov 14.

15.

Viral RNAs are unusually compact.

Gopal A, Egecioglu DE, Yoffe AM, Ben-Shaul A, Rao AL, Knobler CM, Gelbart WM.

PLoS One. 2014 Sep 4;9(9):e105875. doi: 10.1371/journal.pone.0105875. eCollection 2014.

16.

Role of electrostatics in the assembly pathway of a single-stranded RNA virus.

Garmann RF, Comas-Garcia M, Koay MS, Cornelissen JJ, Knobler CM, Gelbart WM.

J Virol. 2014 Sep;88(18):10472-9. doi: 10.1128/JVI.01044-14. Epub 2014 Jun 25.

17.

Characterization of Viral Capsid Protein Self-Assembly around Short Single-Stranded RNA.

Comas-Garcia M, Garmann RF, Singaram SW, Ben-Shaul A, Knobler CM, Gelbart WM.

J Phys Chem B. 2014 Jul 10;118(27):7510-7519. doi: 10.1021/jp503050z. Epub 2014 Jun 30.

PMID:
24933579
18.

Electrophoretic mobilities of a viral capsid, its capsid protein, and their relation to viral assembly.

Vega-Acosta JR, Cadena-Nava RD, Gelbart WM, Knobler CM, Ruiz-García J.

J Phys Chem B. 2014 Feb 27;118(8):1984-9. doi: 10.1021/jp407379t. Epub 2014 Feb 14.

PMID:
24467401
19.

The assembly pathway of an icosahedral single-stranded RNA virus depends on the strength of inter-subunit attractions.

Garmann RF, Comas-Garcia M, Gopal A, Knobler CM, Gelbart WM.

J Mol Biol. 2014 Mar 6;426(5):1050-60. doi: 10.1016/j.jmb.2013.10.017. Epub 2013 Oct 19.

20.

Reconstituted plant viral capsids can release genes to mammalian cells.

Azizgolshani O, Garmann RF, Cadena-Nava R, Knobler CM, Gelbart WM.

Virology. 2013 Jun 20;441(1):12-7. doi: 10.1016/j.virol.2013.03.001. Epub 2013 Apr 19.

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