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Items: 20

1.

Resveratrol enhances palmitate-induced ER stress and apoptosis in cancer cells.

Rojas C, Pan-Castillo B, Valls C, Pujadas G, Garcia-Vallve S, Arola L, Mulero M.

PLoS One. 2014 Dec 1;9(12):e113929. doi: 10.1371/journal.pone.0113929. eCollection 2014 Dec 1.

2.

The good, the bad and the dubious: VHELIBS, a validation helper for ligands and binding sites.

Cereto-Massagué A, Ojeda MJ, Joosten RP, Valls C, Mulero M, Salvado MJ, Arola-Arnal A, Arola L, Garcia-Vallvé S, Pujadas G.

J Cheminform. 2013 Jul 29;5(1):36. doi: 10.1186/1758-2946-5-36.

3.

Identification of PPARgamma partial agonists of natural origin (II): in silico prediction in natural extracts with known antidiabetic activity.

Guasch L, Sala E, Mulero M, Valls C, Salvadó MJ, Pujadas G, Garcia-Vallvé S.

PLoS One. 2013;8(2):e55889. doi: 10.1371/journal.pone.0055889. Epub 2013 Feb 6.

4.

Identification of PPARgamma partial agonists of natural origin (I): development of a virtual screening procedure and in vitro validation.

Guasch L, Sala E, Castell-Auví A, Cedó L, Liedl KR, Wolber G, Muehlbacher M, Mulero M, Pinent M, Ardévol A, Valls C, Pujadas G, Garcia-Vallvé S.

PLoS One. 2012;7(11):e50816. doi: 10.1371/journal.pone.0050816. Epub 2012 Nov 30.

5.

Inhibition of angiotensin-converting enzyme activity by flavonoids: structure-activity relationship studies.

Guerrero L, Castillo J, Quiñones M, Garcia-Vallvé S, Arola L, Pujadas G, Muguerza B.

PLoS One. 2012;7(11):e49493. doi: 10.1371/journal.pone.0049493. Epub 2012 Nov 21.

6.

Identification of novel human dipeptidyl peptidase-IV inhibitors of natural origin (Part II): in silico prediction in antidiabetic extracts.

Guasch L, Sala E, Ojeda MJ, Valls C, Bladé C, Mulero M, Blay M, Ardévol A, Garcia-Vallvé S, Pujadas G.

PLoS One. 2012;7(9):e44972. doi: 10.1371/journal.pone.0044972. Epub 2012 Sep 21.

7.

Identification of novel human dipeptidyl peptidase-IV inhibitors of natural origin (part I): virtual screening and activity assays.

Guasch L, Ojeda MJ, González-Abuín N, Sala E, Cereto-Massagué A, Mulero M, Valls C, Pinent M, Ardévol A, Garcia-Vallvé S, Pujadas G.

PLoS One. 2012;7(9):e44971. doi: 10.1371/journal.pone.0044971. Epub 2012 Sep 12.

8.

Identification of human IKK-2 inhibitors of natural origin (part I): modeling of the IKK-2 kinase domain, virtual screening and activity assays.

Sala E, Guasch L, Iwaszkiewicz J, Mulero M, Salvadó MJ, Pinent M, Zoete V, Grosdidier A, Garcia-Vallvé S, Michielin O, Pujadas G.

PLoS One. 2011 Feb 24;6(2):e16903. doi: 10.1371/journal.pone.0016903.

9.

RCDI/eRCDI: a web-server to estimate codon usage deoptimization.

Puigbò P, Aragonès L, Garcia-Vallvé S.

BMC Res Notes. 2010 Mar 31;3:87. doi: 10.1186/1756-0500-3-87.

10.

Adaptation of the short intergenic spacers between co-directional genes to the Shine-Dalgarno motif among prokaryote genomes.

Pallejà A, García-Vallvé S, Romeu A.

BMC Genomics. 2009 Nov 18;10:537. doi: 10.1186/1471-2164-10-537.

11.

PairWise Neighbours database: overlaps and spacers among prokaryote genomes.

Pallejà A, Reverter T, Garcia-Vallvé S, Romeu A.

BMC Genomics. 2009 Jun 25;10:281. doi: 10.1186/1471-2164-10-281.

12.

CAIcal: a combined set of tools to assess codon usage adaptation.

Puigbò P, Bravo IG, Garcia-Vallve S.

Biol Direct. 2008 Sep 16;3:38. doi: 10.1186/1745-6150-3-38.

13.

E-CAI: a novel server to estimate an expected value of Codon Adaptation Index (eCAI).

Puigbò P, Bravo IG, Garcia-Vallvé S.

BMC Bioinformatics. 2008 Jan 29;9:65. doi: 10.1186/1471-2105-9-65.

14.

HEG-DB: a database of predicted highly expressed genes in prokaryotic complete genomes under translational selection.

Puigbò P, Romeu A, Garcia-Vallvé S.

Nucleic Acids Res. 2008 Jan;36(Database issue):D524-7. Epub 2007 Oct 11.

15.

OPTIMIZER: a web server for optimizing the codon usage of DNA sequences.

Puigbò P, Guzmán E, Romeu A, Garcia-Vallvé S.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W126-31. Epub 2007 Apr 16.

16.

Towards reconstructing a metabolic tree of life.

Marcet-Houben M, Puigbò P, Romeu A, Garcia-Vallve S.

Bioinformation. 2007;2(4):135-44. Epub 2007 Dec 11.

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HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes.

Garcia-Vallve S, Guzman E, Montero MA, Romeu A.

Nucleic Acids Res. 2003 Jan 1;31(1):187-9.

20.

Horizontal gene transfer in bacterial and archaeal complete genomes.

Garcia-Vallvé S, Romeu A, Palau J.

Genome Res. 2000 Nov;10(11):1719-25.

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