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Items: 1 to 20 of 23

1.

Integrative clustering reveals a novel split in the luminal A subtype of breast cancer with impact on outcome.

Aure MR, Vitelli V, Jernström S, Kumar S, Krohn M, Due EU, Haukaas TH, Leivonen SK, Vollan HK, Lüders T, Rødland E, Vaske CJ, Zhao W, Møller EK, Nord S, Giskeødegård GF, Bathen TF, Caldas C, Tramm T, Alsner J, Overgaard J, Geisler J, Bukholm IR, Naume B, Schlichting E, Sauer T, Mills GB, Kåresen R, Mælandsmo GM, Lingjærde OC, Frigessi A, Kristensen VN, Børresen-Dale AL, Sahlberg KK; OSBREAC..

Breast Cancer Res. 2017 Mar 29;19(1):44. doi: 10.1186/s13058-017-0812-y.

2.

Tilting the lasso by knowledge-based post-processing.

Tharmaratnam K, Sperrin M, Jaki T, Reppe S, Frigessi A.

BMC Bioinformatics. 2016 Sep 2;17(1):344. doi: 10.1186/s12859-016-1210-7.

3.

Gene expression analysis supports tumor threshold over 2.0 cm for T-category breast cancer.

Solvang HK, Frigessi A, Kaveh F, Riis ML, Lüders T, Bukholm IR, Kristensen VN, Andreassen BK.

EURASIP J Bioinform Syst Biol. 2016 Feb 8;2016(1):6. eCollection 2016 Dec.

4.

Alcohol and Emotional Contagion: An Examination of the Spreading of Smiles in Male and Female Drinking Groups.

Fairbairn CE, Sayette MA, Aalen OO, Frigessi A.

Clin Psychol Sci. 2015 Sep;3(5):686-701. Epub 2014 Sep 26.

5.

Genome-wide DNA methylation profiles in progression to in situ and invasive carcinoma of the breast with impact on gene transcription and prognosis.

Fleischer T, Frigessi A, Johnson KC, Edvardsen H, Touleimat N, Klajic J, Riis ML, Haakensen VD, Wärnberg F, Naume B, Helland A, Børresen-Dale AL, Tost J, Christensen BC, Kristensen VN.

Genome Biol. 2014;15(8):435. doi: 10.1186/PREACCEPT-2333349012841587. Epub 2014 Aug 22.

6.

The Genomic HyperBrowser: an analysis web server for genome-scale data.

Sandve GK, Gundersen S, Johansen M, Glad IK, Gunathasan K, Holden L, Holden M, Liestøl K, Nygård S, Nygaard V, Paulsen J, Rydbeck H, Trengereid K, Clancy T, Drabløs F, Ferkingstad E, Kalas M, Lien T, Rye MB, Frigessi A, Hovig E.

Nucleic Acids Res. 2013 Jul;41(Web Server issue):W133-41. doi: 10.1093/nar/gkt342. Epub 2013 Apr 30.

7.

A Bayesian hierarchical model with spatial variable selection: the effect of weather on insurance claims.

Scheel I, Ferkingstad E, Frigessi A, Haug O, Hinnerichsen M, Meze-Hausken E.

J R Stat Soc Ser C Appl Stat. 2013 Jan;62(1):85-100.

8.

Genetic variants affecting the neural processing of human facial expressions: evidence using a genome-wide functional imaging approach.

Brown AA, Jensen J, Nikolova YS, Djurovic S, Agartz I, Server A, Ferrell RE, Manuck SB, Mattingsdal M, Melle I, Hariri AR, Frigessi A, Andreassen OA.

Transl Psychiatry. 2012 Jul 24;2:e143. doi: 10.1038/tp.2012.67.

9.

A characterization of internet dating network structures among nordic men who have sex with men.

Villani A, Frigessi A, Liljeros F, Nordvik MK, de Blasio BF.

PLoS One. 2012;7(7):e39717. doi: 10.1371/journal.pone.0039717. Epub 2012 Jul 13.

10.

Overrepresentation of transcription factor families in the genesets underlying breast cancer subtypes.

Joshi H, Nord SH, Frigessi A, Børresen-Dale AL, Kristensen VN.

BMC Genomics. 2012 May 22;13:199. doi: 10.1186/1471-2164-13-199.

11.

Identifying elemental genomic track types and representing them uniformly.

Gundersen S, Kalaš M, Abul O, Frigessi A, Hovig E, Sandve GK.

BMC Bioinformatics. 2011 Dec 30;12:494. doi: 10.1186/1471-2105-12-494.

12.

Estimated comparative integration hotspots identify different behaviors of retroviral gene transfer vectors.

Ambrosi A, Glad IK, Pellin D, Cattoglio C, Mavilio F, Di Serio C, Frigessi A.

PLoS Comput Biol. 2011 Dec;7(12):e1002292. doi: 10.1371/journal.pcbi.1002292. Epub 2011 Dec 1.

13.

The differential disease regulome.

Sandve GK, Gundersen S, Rydbeck H, Glad IK, Holden L, Holden M, Liestøl K, Clancy T, Drabløs F, Ferkingstad E, Johansen M, Nygaard V, Tøstesen E, Frigessi A, Hovig E.

BMC Genomics. 2011 Jul 7;12:353. doi: 10.1186/1471-2164-12-353.

14.

Linear and non-linear dependencies between copy number aberrations and mRNA expression reveal distinct molecular pathways in breast cancer.

Solvang HK, Lingjærde OC, Frigessi A, Børresen-Dale AL, Kristensen VN.

BMC Bioinformatics. 2011 May 24;12:197. doi: 10.1186/1471-2105-12-197.

15.

Combining gene signatures improves prediction of breast cancer survival.

Zhao X, Rødland EA, Sørlie T, Naume B, Langerød A, Frigessi A, Kristensen VN, Børresen-Dale AL, Lingjærde OC.

PLoS One. 2011 Mar 10;6(3):e17845. doi: 10.1371/journal.pone.0017845.

16.

The Genomic HyperBrowser: inferential genomics at the sequence level.

Sandve GK, Gundersen S, Rydbeck H, Glad IK, Holden L, Holden M, Liestøl K, Clancy T, Ferkingstad E, Johansen M, Nygaard V, Tøstesen E, Frigessi A, Hovig E.

Genome Biol. 2010;11(12):R121. doi: 10.1186/gb-2010-11-12-r121. Epub 2010 Dec 23.

17.

In silico ascription of gene expression differences to tumor and stromal cells in a model to study impact on breast cancer outcome.

Myhre S, Mohammed H, Tramm T, Alsner J, Finak G, Park M, Overgaard J, Børresen-Dale AL, Frigessi A, Sørlie T.

PLoS One. 2010 Nov 19;5(11):e14002. doi: 10.1371/journal.pone.0014002.

18.

Validation of oligoarrays for quantitative exploration of the transcriptome.

Nygaard V, Liu F, Holden M, Kuo WP, Trimarchi J, Ohno-Machado L, Cepko CL, Frigessi A, Glad IK, Wiel MA, Hovig E, Lyng H.

BMC Genomics. 2008 May 30;9:258. doi: 10.1186/1471-2164-9-258.

19.

Indirect genomic effects on survival from gene expression data.

Ferkingstad E, Frigessi A, Lyng H.

Genome Biol. 2008;9(3):R58. doi: 10.1186/gb-2008-9-3-r58. Epub 2008 Mar 22.

20.

Climatically driven synchrony of gerbil populations allows large-scale plague outbreaks.

Kausrud KL, Viljugrein H, Frigessi A, Begon M, Davis S, Leirs H, Dubyanskiy V, Stenseth NC.

Proc Biol Sci. 2007 Aug 22;274(1621):1963-9.

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