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Items: 1 to 20 of 32

1.

Tropical soils degraded by slash-and-burn cultivation can be recultivated when amended with ashes and compost.

Gay-des-Combes JM, Sanz Carrillo C, Robroek BJM, Jassey VEJ, Mills RTE, Arif MS, Falquet L, Frossard E, Buttler A.

Ecol Evol. 2017 Jun 12;7(14):5378-5388. doi: 10.1002/ece3.3104. eCollection 2017 Jul.

2.

Clostridium chauvoei, an Evolutionary Dead-End Pathogen.

Rychener L, InAlbon S, Djordjevic SP, Chowdhury PR, Ziech RE, de Vargas AC, Frey J, Falquet L.

Front Microbiol. 2017 Jun 9;8:1054. doi: 10.3389/fmicb.2017.01054. eCollection 2017.

3.

Whole-Genome Sequence of a Colombian Acinetobacter baumannii Strain, a Coproducer of OXA-72 and OXA-255-Like Carbapenemases.

Saavedra SY, Prada-Cardozo D, Rincón V, Pérez-Cardona H, Hidalgo AM, González MN, Reguero MT, Valenzuela de Silva EM, Mantilla JR, Falquet L, Barreto-Hernández E, Duarte C.

Genome Announc. 2017 Feb 16;5(7). pii: e01558-16. doi: 10.1128/genomeA.01558-16.

4.

Cell Cycle Constraints and Environmental Control of Local DNA Hypomethylation in α-Proteobacteria.

Ardissone S, Redder P, Russo G, Frandi A, Fumeaux C, Patrignani A, Schlapbach R, Falquet L, Viollier PH.

PLoS Genet. 2016 Dec 20;12(12):e1006499. doi: 10.1371/journal.pgen.1006499. eCollection 2016 Dec.

5.

The Dedicated Chaperone Acl4 Escorts Ribosomal Protein Rpl4 to Its Nuclear Pre-60S Assembly Site.

Pillet B, García-Gómez JJ, Pausch P, Falquet L, Bange G, de la Cruz J, Kressler D.

PLoS Genet. 2015 Oct 8;11(10):e1005565. doi: 10.1371/journal.pgen.1005565. eCollection 2015 Oct.

6.

Field-Applicable Recombinase Polymerase Amplification Assay for Rapid Detection of Mycoplasma capricolum subsp. capripneumoniae.

Liljander A, Yu M, O'Brien E, Heller M, Nepper JF, Weibel DB, Gluecks I, Younan M, Frey J, Falquet L, Jores J.

J Clin Microbiol. 2015 Sep;53(9):2810-5. doi: 10.1128/JCM.00623-15. Epub 2015 Jun 17.

7.

The Petunia GRAS Transcription Factor ATA/RAM1 Regulates Symbiotic Gene Expression and Fungal Morphogenesis in Arbuscular Mycorrhiza.

Rich MK, Schorderet M, Bapaume L, Falquet L, Morel P, Vandenbussche M, Reinhardt D.

Plant Physiol. 2015 Jul;168(3):788-97. doi: 10.1104/pp.15.00310. Epub 2015 May 13.

8.

SV-AUTOPILOT: optimized, automated construction of structural variation discovery and benchmarking pipelines.

Leung WY, Marschall T, Paudel Y, Falquet L, Mei H, Schönhuth A, Maoz Moss TY.

BMC Genomics. 2015 Mar 25;16:238. doi: 10.1186/s12864-015-1376-9.

9.

Sequencing and characterizing the genome of Estrella lausannensis as an undergraduate project: training students and biological insights.

Bertelli C, Aeby S, Chassot B, Clulow J, Hilfiker O, Rappo S, Ritzmann S, Schumacher P, Terrettaz C, Benaglio P, Falquet L, Farinelli L, Gharib WH, Goesmann A, Harshman K, Linke B, Miyazaki R, Rivolta C, Robinson-Rechavi M, van der Meer JR, Greub G.

Front Microbiol. 2015 Feb 19;6:101. doi: 10.3389/fmicb.2015.00101. eCollection 2015.

10.

A novel bioinformatics pipeline to discover genes related to arbuscular mycorrhizal symbiosis based on their evolutionary conservation pattern among higher plants.

Favre P, Bapaume L, Bossolini E, Delorenzi M, Falquet L, Reinhardt D.

BMC Plant Biol. 2014 Dec 3;14:333. doi: 10.1186/s12870-014-0333-0.

11.

Complete Genome Sequences of Virulent Mycoplasma capricolum subsp. capripneumoniae Strains F38 and ILRI181.

Falquet L, Liljander A, Schieck E, Gluecks I, Frey J, Jores J.

Genome Announc. 2014 Oct 16;2(5). pii: e01041-14. doi: 10.1128/genomeA.01041-14.

12.

Genome and transcriptome sequencing identifies breeding targets in the orphan crop tef (Eragrostis tef).

Cannarozzi G, Plaza-Wüthrich S, Esfeld K, Larti S, Wilson YS, Girma D, de Castro E, Chanyalew S, Blösch R, Farinelli L, Lyons E, Schneider M, Falquet L, Kuhlemeier C, Assefa K, Tadele Z.

BMC Genomics. 2014 Jul 9;15:581. doi: 10.1186/1471-2164-15-581.

13.

Draft Genome Sequences of Multidrug-Resistant Acinetobacter sp. Strains from Colombian Hospitals.

Barreto-Hernández E, Falquet L, Reguero MT, Mantilla JR, Valenzuela EM, González E, Cepeda A, Escalante A.

Genome Announc. 2013 Nov 27;1(6). pii: e00868-13. doi: 10.1128/genomeA.00868-13.

14.

Draft Genome Sequence of the Virulent Clostridium chauvoei Reference Strain JF4335.

Falquet L, Calderon-Copete SP, Frey J.

Genome Announc. 2013 Aug 15;1(4). pii: e00593-13. doi: 10.1128/genomeA.00593-13.

15.

Draft Genome Sequence of the Virulent Avibacterium paragallinarum Serotype A Strain JF4211 and Identification of Two Toxins.

Aguilar-Bultet L, Calderon-Copete SP, Frey J, Falquet L.

Genome Announc. 2013 Aug 15;1(4). pii: e00592-13. doi: 10.1128/genomeA.00592-13.

16.

Short term evolution of a highly transmissible methicillin-resistant Staphylococcus aureus clone (ST228) in a tertiary care hospital.

Vogel V, Falquet L, Calderon-Copete SP, Basset P, Blanc DS.

PLoS One. 2012;7(6):e38969. doi: 10.1371/journal.pone.0038969. Epub 2012 Jun 18.

17.

Genome sequences of the high-acetic acid-resistant bacteria Gluconacetobacter europaeus LMG 18890T and G. europaeus LMG 18494 (reference strains), G. europaeus 5P3, and Gluconacetobacter oboediens 174Bp2 (isolated from vinegar).

Andrés-Barrao C, Falquet L, Calderon-Copete SP, Descombes P, Ortega Pérez R, Barja F.

J Bacteriol. 2011 May;193(10):2670-1. doi: 10.1128/JB.00229-11. Epub 2011 Mar 25.

18.

The genome of the fire ant Solenopsis invicta.

Wurm Y, Wang J, Riba-Grognuz O, Corona M, Nygaard S, Hunt BG, Ingram KK, Falquet L, Nipitwattanaphon M, Gotzek D, Dijkstra MB, Oettler J, Comtesse F, Shih CJ, Wu WJ, Yang CC, Thomas J, Beaudoing E, Pradervand S, Flegel V, Cook ED, Fabbretti R, Stockinger H, Long L, Farmerie WG, Oakey J, Boomsma JJ, Pamilo P, Yi SV, Heinze J, Goodisman MA, Farinelli L, Harshman K, Hulo N, Cerutti L, Xenarios I, Shoemaker D, Keller L.

Proc Natl Acad Sci U S A. 2011 Apr 5;108(14):5679-84. doi: 10.1073/pnas.1009690108. Epub 2011 Jan 31.

19.

Genome-wide comparison of FGFRL1 with structurally related surface receptors.

Zhuang L, Falquet L, Trueb B.

Exp Ther Med. 2010 Jan;1(1):161-168. Epub 2010 Jan 1.

20.

The Mycoplasma conjunctivae genome sequencing, annotation and analysis.

Calderon-Copete SP, Wigger G, Wunderlin C, Schmidheini T, Frey J, Quail MA, Falquet L.

BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S7. doi: 10.1186/1471-2105-10-S6-S7.

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