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Items: 1 to 20 of 27

1.

Evidence of evolutionary history and selective sweeps in the genome of Meishan pig reveals its genetic and phenotypic characterization.

Zhao P, Yu Y, Feng W, Du H, Yu J, Kang H, Zheng X, Wang Z, Liu GE, Ernst CW, Ran X, Wang J, Liu JF.

Gigascience. 2018 May 1;7(5). doi: 10.1093/gigascience/giy058.

2.

Profiling and characterization of a longissimus dorsi muscle microRNA dataset from an F2 Duroc × Pietrain pig resource population.

Daza KR, Steibel JP, Velez-Irizarry D, Raney NE, Bates RO, Ernst CW.

Genom Data. 2017 Jul 5;13:50-53. doi: 10.1016/j.gdata.2017.07.006. eCollection 2017 Sep.

3.

Evidence for transcriptome-wide RNA editing among Sus scrofa PRE-1 SINE elements.

Funkhouser SA, Steibel JP, Bates RO, Raney NE, Schenk D, Ernst CW.

BMC Genomics. 2017 May 9;18(1):360. doi: 10.1186/s12864-017-3766-7.

4.

Genomic Prediction Accounting for Residual Heteroskedasticity.

Ou Z, Tempelman RJ, Steibel JP, Ernst CW, Bates RO, Bello NM.

G3 (Bethesda). 2015 Nov 12;6(1):1-13. doi: 10.1534/g3.115.022897.

5.

Exploring causal networks underlying fat deposition and muscularity in pigs through the integration of phenotypic, genotypic and transcriptomic data.

Peñagaricano F, Valente BD, Steibel JP, Bates RO, Ernst CW, Khatib H, Rosa GJ.

BMC Syst Biol. 2015 Sep 16;9:58. doi: 10.1186/s12918-015-0207-6.

6.

Association of Insulin-like growth factor binding protein 2 genotypes with growth, carcass and meat quality traits in pigs.

Prasongsook S, Choi I, Bates RO, Raney NE, Ernst CW, Tumwasorn S.

J Anim Sci Technol. 2015 Sep 3;57:31. doi: 10.1186/s40781-015-0063-3. eCollection 2015.

7.

Whole blood microarray analysis of pigs showing extreme phenotypes after a porcine reproductive and respiratory syndrome virus infection.

Schroyen M, Steibel JP, Koltes JE, Choi I, Raney NE, Eisley C, Fritz-Waters E, Reecy JM, Dekkers JC, Rowland RR, Lunney JK, Ernst CW, Tuggle CK.

BMC Genomics. 2015 Jul 10;16:516. doi: 10.1186/s12864-015-1741-8.

8.

Evaluation of housekeeping genes for normalizing real-time quantitative PCR assays in pig skeletal muscle at multiple developmental stages.

Wang Y, Zhao Y, Li J, Liu H, Ernst CW, Liu X, Liu G, Xi Y, Lei M.

Gene. 2015 Jul 10;565(2):235-41. doi: 10.1016/j.gene.2015.04.016. Epub 2015 Apr 9.

PMID:
25865298
9.

Rapid screening for phenotype-genotype associations by linear transformations of genomic evaluations.

Gualdrón Duarte JL, Cantet RJ, Bates RO, Ernst CW, Raney NE, Steibel JP.

BMC Bioinformatics. 2014 Jul 19;15:246. doi: 10.1186/1471-2105-15-246.

10.

Accuracy of estimation of genomic breeding values in pigs using low-density genotypes and imputation.

Badke YM, Bates RO, Ernst CW, Fix J, Steibel JP.

G3 (Bethesda). 2014 Apr 16;4(4):623-31. doi: 10.1534/g3.114.010504.

11.

Host genetic resistance to Marek's disease sustains protective efficacy of herpesvirus of turkey in both experimental and commercial lines of chickens.

Chang S, Xie Q, Dunn JR, Ernst CW, Song J, Zhang H.

Vaccine. 2014 Apr 1;32(16):1820-7. doi: 10.1016/j.vaccine.2014.01.092. Epub 2014 Feb 13.

PMID:
24530405
12.

Genotype imputation accuracy in a F2 pig population using high density and low density SNP panels.

Gualdrón Duarte JL, Bates RO, Ernst CW, Raney NE, Cantet RJ, Steibel JP.

BMC Genet. 2013 May 8;14:38. doi: 10.1186/1471-2156-14-38.

13.

Molecular advances in QTL discovery and application in pig breeding.

Ernst CW, Steibel JP.

Trends Genet. 2013 Apr;29(4):215-24. doi: 10.1016/j.tig.2013.02.002. Epub 2013 Mar 14. Review.

PMID:
23498076
14.

Methods of tagSNP selection and other variables affecting imputation accuracy in swine.

Badke YM, Bates RO, Ernst CW, Schwab C, Fix J, Van Tassell CP, Steibel JP.

BMC Genet. 2013 Feb 21;14:8. doi: 10.1186/1471-2156-14-8.

15.

Characterizing differential individual response to porcine reproductive and respiratory syndrome virus infection through statistical and functional analysis of gene expression.

Arceo ME, Ernst CW, Lunney JK, Choi I, Raney NE, Huang T, Tuggle CK, Rowland RR, Steibel JP.

Front Genet. 2013 Jan 16;3:321. doi: 10.3389/fgene.2012.00321. eCollection 2012.

16.

Evaluation of QTL for carcass merit and meat quality traits in a US commercial Duroc population.

Choi I, Bates RO, Raney NE, Steibel JP, Ernst CW.

Meat Sci. 2012 Oct;92(2):132-8. doi: 10.1016/j.meatsci.2012.04.023. Epub 2012 Apr 21.

PMID:
22578477
17.

Identification of Carcass and Meat Quality QTL in an F(2) Duroc × Pietrain Pig Resource Population Using Different Least-Squares Analysis Models.

Choi I, Steibel JP, Bates RO, Raney NE, Rumph JM, Ernst CW.

Front Genet. 2011 May 2;2:18. doi: 10.3389/fgene.2011.00018. eCollection 2011.

18.

Estimation of linkage disequilibrium in four US pig breeds.

Badke YM, Bates RO, Ernst CW, Schwab C, Steibel JP.

BMC Genomics. 2012 Jan 17;13:24. doi: 10.1186/1471-2164-13-24.

20.

Transcriptional profiling identifies differentially expressed genes in developing turkey skeletal muscle.

Sporer KR, Tempelman RJ, Ernst CW, Reed KM, Velleman SG, Strasburg GM.

BMC Genomics. 2011 Mar 8;12:143. doi: 10.1186/1471-2164-12-143.

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