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Items: 1 to 20 of 48

1.

Complete Genome Sequence of Streptomyces Bacteriophage Abt2graduatex2.

Erill I, Caruso SM.

Genome Announc. 2018 Jan 18;6(3). pii: e01480-17. doi: 10.1128/genomeA.01480-17.

2.

Bacillus cereus Group Bacteriophage Flapjack Genome Sequence.

Erill I, Caruso SM; 2016 UMBC Phage Hunters.

Genome Announc. 2017 Aug 3;5(31). pii: e00700-17. doi: 10.1128/genomeA.00700-17.

3.

Complete Genome Sequences of Three phi29-Like Bacillus cereus Group Podoviridae.

Erill I, Caruso SM; 2016 UMBC Phage Hunters.

Genome Announc. 2017 Jul 20;5(29). pii: e00701-17. doi: 10.1128/genomeA.00701-17.

4.

Comparative genomics of the DNA damage-inducible network in the Patescibacteria.

Sánchez-Osuna M, Barbé J, Erill I.

Environ Microbiol. 2017 Sep;19(9):3465-3474. doi: 10.1111/1462-2920.13826. Epub 2017 Jul 21.

PMID:
28618189
5.

Comparative Analysis of Ralstonia solanacearum Methylomes.

Erill I, Puigvert M, Legrand L, Guarischi-Sousa R, Vandecasteele C, Setubal JC, Genin S, Guidot A, Valls M.

Front Plant Sci. 2017 Apr 13;8:504. doi: 10.3389/fpls.2017.00504. eCollection 2017.

6.

Complete Genome Sequence of the Streptomyces Phage Nanodon.

Erill I, Caruso SM.

Genome Announc. 2016 Oct 6;4(5). pii: e01019-16. doi: 10.1128/genomeA.01019-16.

7.

Parametric bootstrapping for biological sequence motifs.

O'Neill PK, Erill I.

BMC Bioinformatics. 2016 Oct 6;17(1):406.

8.

Genome Sequence of Bacillus cereus Group Phage SalinJah.

Erill I, Caruso SM; 2015 UMBC Phage Hunters.

Genome Announc. 2016 Sep 29;4(5). pii: e00953-16. doi: 10.1128/genomeA.00953-16.

9.

Assessment of transfer methods for comparative genomics of regulatory networks in bacteria.

Kılıç S, Erill I.

BMC Bioinformatics. 2016 Aug 31;17 Suppl 8:277. doi: 10.1186/s12859-016-1113-7.

10.

The Verrucomicrobia LexA-Binding Motif: Insights into the Evolutionary Dynamics of the SOS Response.

Erill I, Campoy S, Kılıç S, Barbé J.

Front Mol Biosci. 2016 Jul 20;3:33. doi: 10.3389/fmolb.2016.00033. eCollection 2016.

11.

A Bayesian inference method for the analysis of transcriptional regulatory networks in metagenomic data.

Hobbs ET, Pereira T, O'Neill PK, Erill I.

Algorithms Mol Biol. 2016 Jul 8;11:19. doi: 10.1186/s13015-016-0082-8. eCollection 2016.

12.

From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF.

Kılıç S, Sagitova DM, Wolfish S, Bely B, Courtot M, Ciufo S, Tatusova T, O'Donovan C, Chibucos MC, Martin MJ, Erill I.

Database (Oxford). 2016 Apr 25;2016. pii: baw055. doi: 10.1093/database/baw055. Print 2016.

13.

Genomic characterization and comparison of seven Myoviridae bacteriophage infecting Bacillus thuringiensis.

Sauder AB, Quinn MR, Brouillette A, Caruso S, Cresawn S, Erill I, Lewis L, Loesser-Casey K, Pate M, Scott C, Stockwell S, Temple L.

Virology. 2016 Feb;489:243-51. doi: 10.1016/j.virol.2015.12.012. Epub 2016 Jan 14.

14.

Erratum for Erill and Caruso, Complete Genome Sequence of Bacillus cereus Group Phage TsarBomba.

Erill I, Caruso SM.

Genome Announc. 2015 Nov 19;3(6). pii: e01458-15. doi: 10.1128/genomeA.01458-15. No abstract available.

15.

Genome Sequences of Two Bacillus cereus Group Bacteriophages, Eyuki and AvesoBmore.

Erill I, Caruso SM.

Genome Announc. 2015 Oct 15;3(5). pii: e01199-15. doi: 10.1128/genomeA.01199-15.

16.

Complete Genome Sequence of Bacillus cereus Group Phage TsarBomba.

Erill I, Caruso SM.

Genome Announc. 2015 Oct 15;3(5). pii: e01178-15. doi: 10.1128/genomeA.01178-15. Erratum in: Genome Announc. 2015;3(6). pii: e01458-15. doi: 10.1128/genomeA.01458-15.

17.

Diagnostic yield of targeted next generation sequencing in various cancer types: an information-theoretic approach.

Hagemann IS, O'Neill PK, Erill I, Pfeifer JD.

Cancer Genet. 2015 Sep;208(9):441-7. doi: 10.1016/j.cancergen.2015.05.030. Epub 2015 May 29.

PMID:
26227479
18.

Every Site Counts: Submitting Transcription Factor-Binding Site Information through the CollecTF Portal.

Erill I.

J Bacteriol. 2015 Aug 1;197(15):2454-7. doi: 10.1128/JB.00031-15. Epub 2015 May 26.

19.

An SOS Regulon under Control of a Noncanonical LexA-Binding Motif in the Betaproteobacteria.

Sanchez-Alberola N, Campoy S, Emerson D, Barbé J, Erill I.

J Bacteriol. 2015 Aug;197(16):2622-30. doi: 10.1128/JB.00035-15. Epub 2015 May 18.

20.

Identification and characterization of VpsR and VpsT binding sites in Vibrio cholerae.

Zamorano-Sánchez D, Fong JC, Kilic S, Erill I, Yildiz FH.

J Bacteriol. 2015 Apr;197(7):1221-35. doi: 10.1128/JB.02439-14. Epub 2015 Jan 26.

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