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Items: 1 to 20 of 75

1.

Diet shifts provoke complex and variable changes in the metabolic networks of the ruminal microbiome.

Wolff SM, Ellison MJ, Hao Y, Cockrum RR, Austin KJ, Baraboo M, Burch K, Lee HJ, Maurer T, Patil R, Ravelo A, Taxis TM, Truong H, Lamberson WR, Cammack KM, Conant GC.

Microbiome. 2017 Jun 8;5(1):60. doi: 10.1186/s40168-017-0274-6.

2.

Diet alters both the structure and taxonomy of the ovine gut microbial ecosystem.

Ellison MJ, Conant GC, Cockrum RR, Austin KJ, Truong H, Becchi M, Lamberson WR, Cammack KM.

DNA Res. 2014;21(2):115-25. doi: 10.1093/dnares/dst044. Epub 2013 Oct 29.

3.

Complete Genome of the Solvent-Tolerant Staphylococcus warneri Strain SG1.

Cheng VW, Zhang G, Oyedotun KS, Ridgway D, Ellison MJ, Weiner JH.

Genome Announc. 2013 Mar 14;1(2):e0003813. doi: 10.1128/genomeA.00038-13.

4.

A HUPO test sample study reveals common problems in mass spectrometry-based proteomics.

Bell AW, Deutsch EW, Au CE, Kearney RE, Beavis R, Sechi S, Nilsson T, Bergeron JJ; HUPO Test Sample Working Group.

Nat Methods. 2009 Jun;6(6):423-30. doi: 10.1038/nmeth.1333.

5.

Biological significance of structural differences between two highly conserved Ubc variants.

Pelzer L, Pastushok L, Moraes T, Mark Glover JN, Ellison MJ, Ziola B, Xiao W.

Biochem Biophys Res Commun. 2009 Jan 16;378(3):563-8. doi: 10.1016/j.bbrc.2008.11.089. Epub 2008 Dec 3.

PMID:
19056346
6.

Coarse-grained molecular simulation of diffusion and reaction kinetics in a crowded virtual cytoplasm.

Ridgway D, Broderick G, Lopez-Campistrous A, Ru'aini M, Winter P, Hamilton M, Boulanger P, Kovalenko A, Ellison MJ.

Biophys J. 2008 May 15;94(10):3748-59. doi: 10.1529/biophysj.107.116053. Epub 2008 Jan 30. Erratum in: Biophys J. 2009 Mar 18;96(6):2548.

7.

Mitochondrial dysfunction in the hypertensive rat brain: respiratory complexes exhibit assembly defects in hypertension.

Lopez-Campistrous A, Hao L, Xiang W, Ton D, Semchuk P, Sander J, Ellison MJ, Fernandez-Patron C.

Hypertension. 2008 Feb;51(2):412-9. doi: 10.1161/HYPERTENSIONAHA.107.102285. Epub 2008 Jan 2.

8.

Activation of the Cpx regulon destabilizes the F plasmid transfer activator, TraJ, via the HslVU protease in Escherichia coli.

Lau-Wong IC, Locke T, Ellison MJ, Raivio TL, Frost LS.

Mol Microbiol. 2008 Feb;67(3):516-27. Epub 2007 Dec 9.

9.

Direct catalysis of lysine 48-linked polyubiquitin chains by the ubiquitin-activating enzyme.

Huzil JT, Pannu R, Ptak C, Garen G, Ellison MJ.

J Biol Chem. 2007 Dec 28;282(52):37454-60. Epub 2007 Oct 19.

10.

The Cdc34/SCF ubiquitination complex mediates Saccharomyces cerevisiae cell wall integrity.

Varelas X, Stuart D, Ellison MJ, Ptak C.

Genetics. 2006 Dec;174(4):1825-39. Epub 2006 Oct 8.

11.

Accommodating space, time and randomness in network simulation.

Ridgway D, Broderick G, Ellison MJ.

Curr Opin Biotechnol. 2006 Oct;17(5):493-8. Epub 2006 Sep 8. Review.

PMID:
16962764
12.

Purification and properties of the ubiquitin-conjugating enzymes Cdc34 and Ubc13.Mms2.

Ptak C, Varelas X, Moraes T, McKenna S, Ellison MJ.

Methods Enzymol. 2005;398:43-54.

PMID:
16275318
13.

Distinct regulation of Ubc13 functions by the two ubiquitin-conjugating enzyme variants Mms2 and Uev1A.

Andersen PL, Zhou H, Pastushok L, Moraes T, McKenna S, Ziola B, Ellison MJ, Dixit VM, Xiao W.

J Cell Biol. 2005 Aug 29;170(5):745-55.

14.

Problems with co-funding in Canada.

Tyers M, Brown E, Andrews DW, Bergeron JJ, Boone C, Bremner R, Bussey HA, Cross JC, Davies JE, Desjardins M, Dick JE, Dumont DJ, Durocher D, Ellison MJ, Golding GB, Gray MW, Harrington LA, Hieter PA, Johnston G, Kelvin DJ, McCarry BE, Michnick SW, Ouellette F, Pearlman RE, Penn LJ, Pelletier J, Rachubinski RA, Rennie PS, Rotin D, Rottapel R, Sadowski I, Sicheri F, Siminovitch L, Sonenberg N, Siu KW, Tremblay ML, Winegarden N, Wozniak RW, Wright GD, Woodgett JR.

Science. 2005 Jun 24;308(5730):1867. No abstract available.

PMID:
15976286
15.

A life-like virtual cell membrane using discrete automata.

Broderick G, Ru'aini M, Chan E, Ellison MJ.

In Silico Biol. 2005;5(2):163-78.

PMID:
15972012
16.

Localization, annotation, and comparison of the Escherichia coli K-12 proteome under two states of growth.

Lopez-Campistrous A, Semchuk P, Burke L, Palmer-Stone T, Brokx SJ, Broderick G, Bottorff D, Bolch S, Weiner JH, Ellison MJ.

Mol Cell Proteomics. 2005 Aug;4(8):1205-9. Epub 2005 May 19.

17.

A single Mms2 "key" residue insertion into a Ubc13 pocket determines the interface specificity of a human Lys63 ubiquitin conjugation complex.

Pastushok L, Moraes TF, Ellison MJ, Xiao W.

J Biol Chem. 2005 May 6;280(18):17891-900. Epub 2005 Mar 4.

18.
19.

Energetics and specificity of interactions within Ub.Uev.Ubc13 human ubiquitin conjugation complexes.

McKenna S, Hu J, Moraes T, Xiao W, Ellison MJ, Spyracopoulos L.

Biochemistry. 2003 Jul 8;42(26):7922-30.

PMID:
12834344
20.

An NMR-based model of the ubiquitin-bound human ubiquitin conjugation complex Mms2.Ubc13. The structural basis for lysine 63 chain catalysis.

McKenna S, Moraes T, Pastushok L, Ptak C, Xiao W, Spyracopoulos L, Ellison MJ.

J Biol Chem. 2003 Apr 11;278(15):13151-8. Epub 2003 Feb 4.

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