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Items: 1 to 20 of 66

1.

Toward establishing model organisms for marine protists: Successful transfection protocols for Parabodo caudatus (Kinetoplastida: Excavata).

Gomaa F, Garcia PA, Delaney J, Girguis PR, Buie CR, Edgcomb VP.

Environ Microbiol. 2017 Sep;19(9):3487-3499. doi: 10.1111/1462-2920.13830. Epub 2017 Jul 21.

PMID:
28631386
2.

UniEuk: Time to Speak a Common Language in Protistology!

Berney C, Ciuprina A, Bender S, Brodie J, Edgcomb V, Kim E, Rajan J, Parfrey LW, Adl S, Audic S, Bass D, Caron DA, Cochrane G, Czech L, Dunthorn M, Geisen S, Glöckner FO, Mahé F, Quast C, Kaye JZ, Simpson AGB, Stamatakis A, Del Campo J, Yilmaz P, de Vargas C.

J Eukaryot Microbiol. 2017 May;64(3):407-411. doi: 10.1111/jeu.12414. Epub 2017 Apr 21. Review.

3.

Gene expression profiling of microbial activities and interactions in sediments under haloclines of E. Mediterranean deep hypersaline anoxic basins.

Edgcomb VP, Pachiadaki MG, Mara P, Kormas KA, Leadbetter ER, Bernhard JM.

ISME J. 2016 Nov;10(11):2643-2657. doi: 10.1038/ismej.2016.58. Epub 2016 Apr 19.

PMID:
27093045
4.

The Diversity of Sulfide Oxidation and Sulfate Reduction Genes Expressed by the Bacterial Communities of the Cariaco Basin, Venezuela.

Rodriguez-Mora MJ, Edgcomb VP, Taylor C, Scranton MI, Taylor GT, Chistoserdov AY.

Open Microbiol J. 2016 Aug 31;10:140-9. doi: 10.2174/1874285801610010140. eCollection 2016.

5.

Fungal and Prokaryotic Activities in the Marine Subsurface Biosphere at Peru Margin and Canterbury Basin Inferred from RNA-Based Analyses and Microscopy.

Pachiadaki MG, Rédou V, Beaudoin DJ, Burgaud G, Edgcomb VP.

Front Microbiol. 2016 Jun 9;7:846. doi: 10.3389/fmicb.2016.00846. eCollection 2016.

6.

Revisiting the pink-red pigmented basidiomycete mirror yeast of the phyllosphere.

Cobban A, Edgcomb VP, Burgaud G, Repeta D, Leadbetter ER.

Microbiologyopen. 2016 Oct;5(5):846-855. doi: 10.1002/mbo3.374. Epub 2016 May 10.

7.

Marine protist associations and environmental impacts across trophic levels in the twilight zone and below.

Edgcomb VP.

Curr Opin Microbiol. 2016 Jun;31:169-75. doi: 10.1016/j.mib.2016.04.001. Epub 2016 Apr 17. Review.

PMID:
27092409
8.

Metazoans of redoxcline sediments in Mediterranean deep-sea hypersaline anoxic basins.

Bernhard JM, Morrison CR, Pape E, Beaudoin DJ, Todaro MA, Pachiadaki MG, Kormas KA, Edgcomb VP.

BMC Biol. 2015 Dec 10;13:105. doi: 10.1186/s12915-015-0213-6.

9.

Combined Culture-Based and Culture-Independent Approaches Provide Insights into Diversity of Jakobids, an Extremely Plesiomorphic Eukaryotic Lineage.

Pánek T, Táborský P, Pachiadaki MG, Hroudová M, Vlček Č, Edgcomb VP, Čepička I.

Front Microbiol. 2015 Nov 18;6:1288. doi: 10.3389/fmicb.2015.01288. eCollection 2015.

10.

Inter-comparison of the potentially active prokaryotic communities in the halocline sediments of Mediterranean deep-sea hypersaline basins.

Kormas KA, Pachiadaki MG, Karayanni H, Leadbetter ER, Bernhard JM, Edgcomb VP.

Extremophiles. 2015 Sep;19(5):949-60. doi: 10.1007/s00792-015-0770-1. Epub 2015 Jul 16.

PMID:
26174531
11.

Protist Community Grazing on Prokaryotic Prey in Deep Ocean Water Masses.

Rocke E, Pachiadaki MG, Cobban A, Kujawinski EB, Edgcomb VP.

PLoS One. 2015 Apr 20;10(4):e0124505. doi: 10.1371/journal.pone.0124505. eCollection 2015.

12.

Size-fractionated diversity of eukaryotic microbial communities in the Eastern Tropical North Pacific oxygen minimum zone.

Duret MT, Pachiadaki MG, Stewart FJ, Sarode N, Christaki U, Monchy S, Srivastava A, Edgcomb VP.

FEMS Microbiol Ecol. 2015 May;91(5). pii: fiv037. doi: 10.1093/femsec/fiv037. Epub 2015 Apr 1.

PMID:
25873468
13.

Depth shapes α- and β-diversities of microbial eukaryotes in surficial sediments of coastal ecosystems.

Gong J, Shi F, Ma B, Dong J, Pachiadaki M, Zhang X, Edgcomb VP.

Environ Microbiol. 2015 Oct;17(10):3722-37. doi: 10.1111/1462-2920.12763. Epub 2015 Feb 11.

PMID:
25581721
14.

Benthic protists and fungi of Mediterranean deep hypsersaline anoxic basin redoxcline sediments.

Bernhard JM, Kormas K, Pachiadaki MG, Rocke E, Beaudoin DJ, Morrison C, Visscher PT, Cobban A, Starczak VR, Edgcomb VP.

Front Microbiol. 2014 Nov 12;5:605. doi: 10.3389/fmicb.2014.00605. eCollection 2014.

15.

Microbial eukaryote diversity in the marine oxygen minimum zone off northern Chile.

Parris DJ, Ganesh S, Edgcomb VP, DeLong EF, Stewart FJ.

Front Microbiol. 2014 Oct 28;5:543. doi: 10.3389/fmicb.2014.00543. eCollection 2014.

16.

In-depth analyses of deep subsurface sediments using 454-pyrosequencing reveals a reservoir of buried fungal communities at record-breaking depths.

Rédou V, Ciobanu MC, Pachiadaki MG, Edgcomb V, Alain K, Barbier G, Burgaud G.

FEMS Microbiol Ecol. 2014 Dec;90(3):908-21. doi: 10.1111/1574-6941.12447. Epub 2014 Nov 17.

17.

Unveiling microbial activities along the halocline of Thetis, a deep-sea hypersaline anoxic basin.

Pachiadaki MG, Yakimov MM, LaCono V, Leadbetter E, Edgcomb V.

ISME J. 2014 Dec;8(12):2478-89. doi: 10.1038/ismej.2014.100. Epub 2014 Jun 20.

18.

Ciliates along oxyclines of permanently stratified marine water columns.

Edgcomb VP, Pachiadaki M.

J Eukaryot Microbiol. 2014 Jul-Aug;61(4):434-45. doi: 10.1111/jeu.12122. Epub 2014 Jun 3.

PMID:
24801774
19.

A resurgence in field research is essential to better understand the diversity, ecology, and evolution of microbial eukaryotes.

Heger TJ, Edgcomb VP, Kim E, Lukeš J, Leander BS, Yubuki N.

J Eukaryot Microbiol. 2014 Mar-Apr;61(2):214-23. doi: 10.1111/jeu.12095. Epub 2014 Feb 25.

PMID:
24325268
20.

Active eukaryotes in microbialites from Highborne Cay, Bahamas, and Hamelin Pool (Shark Bay), Australia.

Edgcomb VP, Bernhard JM, Summons RE, Orsi W, Beaudoin D, Visscher PT.

ISME J. 2014 Feb;8(2):418-29. doi: 10.1038/ismej.2013.130. Epub 2013 Aug 8.

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