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Items: 1 to 20 of 122

1.

How and how much does RAD-seq bias genetic diversity estimates?

Cariou M, Duret L, Charlat S.

BMC Evol Biol. 2016 Nov 8;16(1):240.

2.

No Evidence That Nitrogen Limitation Influences the Elemental Composition of Isopod Transcriptomes and Proteomes.

Francois CM, Duret L, Simon L, Mermillod-Blondin F, Malard F, Konecny-Dupré L, Planel R, Penel S, Douady CJ, Lefébure T.

Mol Biol Evol. 2016 Oct;33(10):2605-20. doi: 10.1093/molbev/msw131.

PMID:
27401232
3.

Occurrence of a non deleterious gene conversion event in the BRCA1 gene.

Tessereau C, Léoné M, Buisson M, Duret L, Sinilnikova OM, Mazoyer S.

Genes Chromosomes Cancer. 2015 Oct;54(10):646-52. doi: 10.1002/gcc.22278.

PMID:
26171949
4.

Quantification of GC-biased gene conversion in the human genome.

Glémin S, Arndt PF, Messer PW, Petrov D, Galtier N, Duret L.

Genome Res. 2015 Aug;25(8):1215-28. doi: 10.1101/gr.185488.114.

5.

Optimization of multiplexed RADseq libraries using low-cost adaptors.

Henri H, Cariou M, Terraz G, Martinez S, El Filali A, Veyssiere M, Duret L, Charlat S.

Genetica. 2015 Apr;143(2):139-43. doi: 10.1007/s10709-015-9828-3.

PMID:
25666920
6.

GC-Content evolution in bacterial genomes: the biased gene conversion hypothesis expands.

Lassalle F, Périan S, Bataillon T, Nesme X, Duret L, Daubin V.

PLoS Genet. 2015 Feb 6;11(2):e1004941. doi: 10.1371/journal.pgen.1004941.

7.

The red queen model of recombination hotspots evolution in the light of archaic and modern human genomes.

Lesecque Y, Glémin S, Lartillot N, Mouchiroud D, Duret L.

PLoS Genet. 2014 Nov 13;10(11):e1004790. doi: 10.1371/journal.pgen.1004790.

8.

Comparative population genomics in animals uncovers the determinants of genetic diversity.

Romiguier J, Gayral P, Ballenghien M, Bernard A, Cahais V, Chenuil A, Chiari Y, Dernat R, Duret L, Faivre N, Loire E, Lourenco JM, Nabholz B, Roux C, Tsagkogeorga G, Weber AA, Weinert LA, Belkhir K, Bierne N, Glémin S, Galtier N.

Nature. 2014 Nov 13;515(7526):261-3. doi: 10.1038/nature13685.

PMID:
25141177
9.

Estimation of the RNU2 macrosatellite mutation rate by BRCA1 mutation tracing.

Tessereau C, Lesecque Y, Monnet N, Buisson M, Barjhoux L, Léoné M, Feng B, Goldgar DE, Sinilnikova OM, Mousset S, Duret L, Mazoyer S.

Nucleic Acids Res. 2014 Aug;42(14):9121-30. doi: 10.1093/nar/gku639.

10.

The spatiotemporal program of DNA replication is associated with specific combinations of chromatin marks in human cells.

Picard F, Cadoret JC, Audit B, Arneodo A, Alberti A, Battail C, Duret L, Prioleau MN.

PLoS Genet. 2014 May 1;10(5):e1004282. doi: 10.1371/journal.pgen.1004282.

11.
12.

Is RAD-seq suitable for phylogenetic inference? An in silico assessment and optimization.

Cariou M, Duret L, Charlat S.

Ecol Evol. 2013 Apr;3(4):846-52. doi: 10.1002/ece3.512.

13.

GC-biased gene conversion in yeast is specifically associated with crossovers: molecular mechanisms and evolutionary significance.

Lesecque Y, Mouchiroud D, Duret L.

Mol Biol Evol. 2013 Jun;30(6):1409-19. doi: 10.1093/molbev/mst056.

14.

The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes.

Montgomery SB, Goode DL, Kvikstad E, Albers CA, Zhang ZD, Mu XJ, Ananda G, Howie B, Karczewski KJ, Smith KS, Anaya V, Richardson R, Davis J; 1000 Genomes Project Consortium., MacArthur DG, Sidow A, Duret L, Gerstein M, Makova KD, Marchini J, McVean G, Lunter G.

Genome Res. 2013 May;23(5):749-61. doi: 10.1101/gr.148718.112.

15.

XACT, a long noncoding transcript coating the active X chromosome in human pluripotent cells.

Vallot C, Huret C, Lesecque Y, Resch A, Oudrhiri N, Bennaceur-Griscelli A, Duret L, Rougeulle C.

Nat Genet. 2013 Mar;45(3):239-41. doi: 10.1038/ng.2530.

PMID:
23334669
16.

Genome-scale coestimation of species and gene trees.

Boussau B, Szöllosi GJ, Duret L, Gouy M, Tannier E, Daubin V.

Genome Res. 2013 Feb;23(2):323-30. doi: 10.1101/gr.141978.112.

17.

The Paramecium germline genome provides a niche for intragenic parasitic DNA: evolutionary dynamics of internal eliminated sequences.

Arnaiz O, Mathy N, Baudry C, Malinsky S, Aury JM, Denby Wilkes C, Garnier O, Labadie K, Lauderdale BE, Le Mouël A, Marmignon A, Nowacki M, Poulain J, Prajer M, Wincker P, Meyer E, Duharcourt S, Duret L, Bétermier M, Sperling L.

PLoS Genet. 2012;8(10):e1002984. doi: 10.1371/journal.pgen.1002984.

18.

Evidence for widespread GC-biased gene conversion in eukaryotes.

Pessia E, Popa A, Mousset S, Rezvoy C, Duret L, Marais GA.

Genome Biol Evol. 2012;4(7):675-82. doi: 10.1093/gbe/evs052.

19.

High-quality sequence clustering guided by network topology and multiple alignment likelihood.

Miele V, Penel S, Daubin V, Picard F, Kahn D, Duret L.

Bioinformatics. 2012 Apr 15;28(8):1078-85. doi: 10.1093/bioinformatics/bts098.

20.

Preventing dangerous nonsense: selection for robustness to transcriptional error in human genes.

Cusack BP, Arndt PF, Duret L, Roest Crollius H.

PLoS Genet. 2011 Oct;7(10):e1002276. doi: 10.1371/journal.pgen.1002276.

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