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Items: 1 to 20 of 46


Disturbance Regimes Predictably Alter Diversity in an Ecologically Complex Bacterial System.

Gibbons SM, Scholz M, Hutchison AL, Dinner AR, Gilbert JA, Coleman ML.

MBio. 2016 Dec 20;7(6). pii: e01372-16. doi: 10.1128/mBio.01372-16.


Refining Disordered Peptide Ensembles with Computational Amide I Spectroscopy: Application to Elastin-Like Peptides.

Reppert M, Roy AR, Tempkin JO, Dinner AR, Tokmakoff A.

J Phys Chem B. 2016 Nov 10;120(44):11395-11404. Epub 2016 Oct 27.


Self-Antigen-Driven Thymic B Cell Class Switching Promotes T Cell Central Tolerance.

Perera J, Zheng Z, Li S, Gudjonson H, Kalinina O, Benichou JI, Block KE, Louzoun Y, Yin D, Chong AS, Dinner AR, Weigert M, Huang H.

Cell Rep. 2016 Oct 4;17(2):387-398. doi: 10.1016/j.celrep.2016.09.011.


Structural basis for oligomerization and glycosaminoglycan binding of CCL5 and CCL3.

Liang WG, Triandafillou CG, Huang TY, Zulueta MM, Banerjee S, Dinner AR, Hung SC, Tang WJ.

Proc Natl Acad Sci U S A. 2016 May 3;113(18):5000-5. doi: 10.1073/pnas.1523981113. Epub 2016 Apr 18.


Multiple Time-Step Dual-Hamiltonian Hybrid Molecular Dynamics - Monte Carlo Canonical Propagation Algorithm.

Chen Y, Kale S, Weare J, Dinner AR, Roux B.

J Chem Theory Comput. 2016 Apr 12;12(4):1449-58. doi: 10.1021/acs.jctc.5b00706. Epub 2016 Mar 25.


Single-cell analysis defines the divergence between the innate lymphoid cell lineage and lymphoid tissue-inducer cell lineage.

Ishizuka IE, Chea S, Gudjonson H, Constantinides MG, Dinner AR, Bendelac A, Golub R.

Nat Immunol. 2016 Mar;17(3):269-76. doi: 10.1038/ni.3344. Epub 2016 Jan 18.


Dynamics and heterogeneity of a fate determinant during transition towards cell differentiation.

Peláez N, Gavalda-Miralles A, Wang B, Navarro HT, Gudjonson H, Rebay I, Dinner AR, Katsaggelos AK, Amaral LA, Carthew RW.

Elife. 2015 Nov 19;4. pii: e08924. doi: 10.7554/eLife.08924.


Pancreatic β cell enhancers regulate rhythmic transcription of genes controlling insulin secretion.

Perelis M, Marcheva B, Ramsey KM, Schipma MJ, Hutchison AL, Taguchi A, Peek CB, Hong H, Huang W, Omura C, Allred AL, Bradfield CA, Dinner AR, Barish GD, Bass J.

Science. 2015 Nov 6;350(6261):aac4250. doi: 10.1126/science.aac4250.


A Conserved Bicycle Model for Circadian Clock Control of Membrane Excitability.

Flourakis M, Kula-Eversole E, Hutchison AL, Han TH, Aranda K, Moose DL, White KP, Dinner AR, Lear BC, Ren D, Diekman CO, Raman IM, Allada R.

Cell. 2015 Aug 13;162(4):836-48. doi: 10.1016/j.cell.2015.07.036.


Effects of diurnal variation of gut microbes and high-fat feeding on host circadian clock function and metabolism.

Leone V, Gibbons SM, Martinez K, Hutchison AL, Huang EY, Cham CM, Pierre JF, Heneghan AF, Nadimpalli A, Hubert N, Zale E, Wang Y, Huang Y, Theriault B, Dinner AR, Musch MW, Kudsk KA, Prendergast BJ, Gilbert JA, Chang EB.

Cell Host Microbe. 2015 May 13;17(5):681-9. doi: 10.1016/j.chom.2015.03.006. Epub 2015 Apr 16.


PLZF expression maps the early stages of ILC1 lineage development.

Constantinides MG, Gudjonson H, McDonald BD, Ishizuka IE, Verhoef PA, Dinner AR, Bendelac A.

Proc Natl Acad Sci U S A. 2015 Apr 21;112(16):5123-8. doi: 10.1073/pnas.1423244112. Epub 2015 Apr 2.


Improved statistical methods enable greater sensitivity in rhythm detection for genome-wide data.

Hutchison AL, Maienschein-Cline M, Chiang AH, Tabei SM, Gudjonson H, Bahroos N, Allada R, Dinner AR.

PLoS Comput Biol. 2015 Mar 20;11(3):e1004094. doi: 10.1371/journal.pcbi.1004094. eCollection 2015 Mar.


Intergenerational continuity of cell shape dynamics in Caulobacter crescentus.

Wright CS, Banerjee S, Iyer-Biswas S, Crosson S, Dinner AR, Scherer NF.

Sci Rep. 2015 Mar 17;5:9155. doi: 10.1038/srep09155.


Finding Chemical Reaction Paths with a Multilevel Preconditioning Protocol.

Kale S, Sode O, Weare J, Dinner AR.

J Chem Theory Comput. 2014 Dec 9;10(12):5467-5475. Epub 2014 Nov 7.


Scaling laws governing stochastic growth and division of single bacterial cells.

Iyer-Biswas S, Wright CS, Henry JT, Lo K, Burov S, Lin Y, Crooks GE, Crosson S, Dinner AR, Scherer NF.

Proc Natl Acad Sci U S A. 2014 Nov 11;111(45):15912-7. doi: 10.1073/pnas.1403232111. Epub 2014 Oct 27.


A negative feedback loop mediated by the Bcl6-cullin 3 complex limits Tfh cell differentiation.

Mathew R, Mao AP, Chiang AH, Bertozzi-Villa C, Bunker JJ, Scanlon ST, McDonald BD, Constantinides MG, Hollister K, Singer JD, Dent AL, Dinner AR, Bendelac A.

J Exp Med. 2014 Jun 2;211(6):1137-51. doi: 10.1084/jem.20132267. Epub 2014 May 26.


Nucleotide regulation of the structure and dynamics of G-actin.

Saunders MG, Tempkin J, Weare J, Dinner AR, Roux B, Voth GA.

Biophys J. 2014 Apr 15;106(8):1710-20. doi: 10.1016/j.bpj.2014.03.012.


Distribution of directional change as a signature of complex dynamics.

Burov S, Tabei SM, Huynh T, Murrell MP, Philipson LH, Rice SA, Gardel ML, Scherer NF, Dinner AR.

Proc Natl Acad Sci U S A. 2013 Dec 3;110(49):19689-94. doi: 10.1073/pnas.1319473110. Epub 2013 Nov 18.


Transcriptional regulation of germinal center B and plasma cell fates by dynamical control of IRF4.

Ochiai K, Maienschein-Cline M, Simonetti G, Chen J, Rosenthal R, Brink R, Chong AS, Klein U, Dinner AR, Singh H, Sciammas R.

Immunity. 2013 May 23;38(5):918-29. doi: 10.1016/j.immuni.2013.04.009. Epub 2013 May 16.


Intracellular transport of insulin granules is a subordinated random walk.

Tabei SM, Burov S, Kim HY, Kuznetsov A, Huynh T, Jureller J, Philipson LH, Dinner AR, Scherer NF.

Proc Natl Acad Sci U S A. 2013 Mar 26;110(13):4911-6. doi: 10.1073/pnas.1221962110. Epub 2013 Mar 11.

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