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Items: 1 to 20 of 55

1.

In silico modeling of the antiplatelet pharmacodynamics of low-dose aspirin in health and disease.

Giaretta A, Rocca B, Di Camillo B, Maria Toffolo G, Patrono C.

Clin Pharmacol Ther. 2017 Apr 5. doi: 10.1002/cpt.694. [Epub ahead of print]

PMID:
28378909
2.

Measuring the diversity of the human microbiota with targeted next-generation sequencing.

Finotello F, Mastrorilli E, Di Camillo B.

Brief Bioinform. 2016 Dec 26. pii: bbw119. doi: 10.1093/bib/bbw119. [Epub ahead of print]

PMID:
28025179
3.

bnstruct: an R package for Bayesian Network structure learning in the presence of missing data.

Franzin A, Sambo F, Di Camillo B.

Bioinformatics. 2017 Apr 15;33(8):1250-1252. doi: 10.1093/bioinformatics/btw807.

PMID:
28003263
4.

Simulation-based comprehensive benchmarking of RNA-seq aligners.

Baruzzo G, Hayer KE, Kim EJ, Di Camillo B, FitzGerald GA, Grant GR.

Nat Methods. 2017 Feb;14(2):135-139. doi: 10.1038/nmeth.4106. Epub 2016 Dec 12.

PMID:
27941783
5.

Down-regulation of microRNA-146a is associated with high-risk human papillomavirus infection and epidermal growth factor receptor overexpression in penile squamous cell carcinoma.

Peta E, Cappellesso R, Masi G, Sinigaglia A, Trevisan M, Grassi A, Di Camillo B, Vassarotto E, Fassina A, Palù G, Barzon L.

Hum Pathol. 2017 Mar;61:33-40. doi: 10.1016/j.humpath.2016.10.019. Epub 2016 Nov 4.

PMID:
27818285
6.

The Genetic Landscape of Renal Complications in Type 1 Diabetes.

Sandholm N, Van Zuydam N, Ahlqvist E, Juliusdottir T, Deshmukh HA, Rayner NW, Di Camillo B, Forsblom C, Fadista J, Ziemek D, Salem RM, Hiraki LT, Pezzolesi M, Trégouët D, Dahlström E, Valo E, Oskolkov N, Ladenvall C, Marcovecchio ML, Cooper J, Sambo F, Malovini A, Manfrini M, McKnight AJ, Lajer M, Harjutsalo V, Gordin D, Parkkonen M; FinnDiane Study Group, Jaakko Tuomilehto., Lyssenko V, McKeigue PM, Rich SS, Brosnan MJ, Fauman E, Bellazzi R, Rossing P, Hadjadj S, Krolewski A, Paterson AD; DCCT/EDIC Study Group, Jose C. Florez., Hirschhorn JN, Maxwell AP; GENIE Consortium, David Dunger., Cobelli C, Colhoun HM, Groop L, McCarthy MI, Groop PH; SUMMIT Consortium..

J Am Soc Nephrol. 2017 Feb;28(2):557-574. doi: 10.1681/ASN.2016020231. Epub 2016 Sep 19.

PMID:
27647854
7.

A rule-based model of insulin signalling pathway.

Di Camillo B, Carlon A, Eduati F, Toffolo GM.

BMC Syst Biol. 2016 Jun 1;10(1):38. doi: 10.1186/s12918-016-0281-4.

8.

Reconstruction of gene regulatory modules from RNA silencing of IFN-α modulators: experimental set-up and inference method.

Grassi A, Di Camillo B, Ciccarese F, Agnusdei V, Zanovello P, Amadori A, Finesso L, Indraccolo S, Toffolo GM.

BMC Genomics. 2016 Mar 12;17:228. doi: 10.1186/s12864-016-2525-5.

9.

Can ecological history influence response to pollutants? Transcriptomic analysis of Manila clam collected in different Venice lagoon areas and exposed to heavy metal.

Milan M, Matozzo V, Pauletto M, Di Camillo B, Giacomazzo M, Boffo L, Binato G, Marin MG, Patarnello T, Bargelloni L.

Aquat Toxicol. 2016 May;174:123-33. doi: 10.1016/j.aquatox.2016.02.024. Epub 2016 Mar 2.

PMID:
26945539
10.

Modeling HPV early promoter regulation.

Giaretta A, Di Camillo B, Barzon L, Toffolo GM.

Conf Proc IEEE Eng Med Biol Soc. 2015;2015:6493-6. doi: 10.1109/EMBC.2015.7319880.

PMID:
26737780
11.

A Bayesian Network analysis of the probabilistic relations between risk factors in the predisposition to type 2 diabetes.

Sambo F, Di Camillo B, Franzin A, Facchinetti A, Hakaste L, Kravic J, Fico G, Tuomilehto J, Groop L, Gabriel R, Tuomi T, Cobelli C.

Conf Proc IEEE Eng Med Biol Soc. 2015;2015:2119-22. doi: 10.1109/EMBC.2015.7318807.

PMID:
26736707
12.

A Dynamic Bayesian Network model for long-term simulation of clinical complications in type 1 diabetes.

Marini S, Trifoglio E, Barbarini N, Sambo F, Di Camillo B, Malovini A, Manfrini M, Cobelli C, Bellazzi R.

J Biomed Inform. 2015 Oct;57:369-76. doi: 10.1016/j.jbi.2015.08.021. Epub 2015 Aug 29.

13.

FunPat: function-based pattern analysis on RNA-seq time series data.

Sanavia T, Finotello F, Di Camillo B.

BMC Genomics. 2015;16:S2. doi: 10.1186/1471-2164-16-S6-S2. Epub 2015 Jun 1.

14.

Toxicogenomic markers for corticosteroid treatment in beef cattle: integrated analysis of transcriptomic data.

Pegolo S, Di Camillo B, Montesissa C, Cannizzo FT, Biolatti B, Bargelloni L.

Food Chem Toxicol. 2015 Mar;77:1-11. doi: 10.1016/j.fct.2014.12.001. Epub 2014 Dec 19.

PMID:
25533795
15.

Early origins of adult disease: low birth weight and vascular remodeling.

Visentin S, Grumolato F, Nardelli GB, Di Camillo B, Grisan E, Cosmi E.

Atherosclerosis. 2014 Dec;237(2):391-9. doi: 10.1016/j.atherosclerosis.2014.09.027. Epub 2014 Sep 30. Review.

PMID:
25463063
16.

Changes in microRNA expression during disease progression in patients with chronic viral hepatitis.

Sinigaglia A, Lavezzo E, Trevisan M, Sanavia T, Di Camillo B, Peta E, Scarpa M, Castagliuolo I, Guido M, Sarcognato S, Cappellesso R, Fassina A, Cardin R, Farinati F, Palù G, Barzon L.

Liver Int. 2015 Apr;35(4):1324-33. doi: 10.1111/liv.12737. Epub 2015 Jan 13.

PMID:
25417901
17.

Measuring differential gene expression with RNA-seq: challenges and strategies for data analysis.

Finotello F, Di Camillo B.

Brief Funct Genomics. 2015 Mar;14(2):130-42. doi: 10.1093/bfgp/elu035. Epub 2014 Sep 18. Review.

PMID:
25240000
18.

3DSpectra: A 3-dimensional quantification algorithm for LC-MS labeled profile data.

Nasso S, Hartler J, Trajanoski Z, Di Camillo B, Mechtler K, Toffolo GM.

J Proteomics. 2015 Jan 1;112:156-65. doi: 10.1016/j.jprot.2014.08.017. Epub 2014 Sep 16.

PMID:
25218586
19.

Global genomic and transcriptomic analysis of human pancreatic islets reveals novel genes influencing glucose metabolism.

Fadista J, Vikman P, Laakso EO, Mollet IG, Esguerra JL, Taneera J, Storm P, Osmark P, Ladenvall C, Prasad RB, Hansson KB, Finotello F, Uvebrant K, Ofori JK, Di Camillo B, Krus U, Cilio CM, Hansson O, Eliasson L, Rosengren AH, Renström E, Wollheim CB, Groop L.

Proc Natl Acad Sci U S A. 2014 Sep 23;111(38):13924-9. doi: 10.1073/pnas.1402665111. Epub 2014 Sep 8.

20.

Compression and fast retrieval of SNP data.

Sambo F, Di Camillo B, Toffolo G, Cobelli C.

Bioinformatics. 2014 Nov 1;30(21):3078-85. doi: 10.1093/bioinformatics/btu495. Epub 2014 Jul 26.

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