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A Large and Consistent Phylogenomic Dataset Supports Sponges as the Sister Group to All Other Animals.

Simion P, Philippe H, Baurain D, Jager M, Richter DJ, Di Franco A, Roure B, Satoh N, Quéinnec É, Ereskovsky A, Lapébie P, Corre E, Delsuc F, King N, Wörheide G, Manuel M.

Curr Biol. 2017 Apr 3;27(7):958-967. doi: 10.1016/j.cub.2017.02.031. Epub 2017 Mar 16.


Genetic structuring in a relictual population of screaming hairy armadillo (Chaetophractus vellerosus) in Argentina revealed by a set of novel microsatellite loci.

Nardelli M, Ibáñez EA, Dobler D, Justy F, Delsuc F, Abba AM, Cassini MH, Túnez JI.

Genetica. 2016 Aug;144(4):469-76. doi: 10.1007/s10709-016-9915-0. Epub 2016 Jul 12.


Genome-Wide Screening of Retroviral Envelope Genes in the Nine-Banded Armadillo (Dasypus novemcinctus, Xenarthra) Reveals an Unfixed Chimeric Endogenous Betaretrovirus Using the ASCT2 Receptor.

Malicorne S, Vernochet C, Cornelis G, Mulot B, Delsuc F, Heidmann O, Heidmann T, Dupressoir A.

J Virol. 2016 Aug 26;90(18):8132-49. doi: 10.1128/JVI.00483-16. Print 2016 Sep 15.


Predicting biotic interactions and their variability in a changing environment.

Kadowaki K, Barbera CG, Godsoe W, Delsuc F, Mouquet N.

Biol Lett. 2016 May;12(5). pii: 20151073. doi: 10.1098/rsbl.2015.1073.


The phylogenetic affinities of the extinct glyptodonts.

Delsuc F, Gibb GC, Kuch M, Billet G, Hautier L, Southon J, Rouillard JM, Fernicola JC, Vizcaíno SF, MacPhee RD, Poinar HN.

Curr Biol. 2016 Feb 22;26(4):R155-6. doi: 10.1016/j.cub.2016.01.039.


Shotgun Mitogenomics Provides a Reference Phylogenetic Framework and Timescale for Living Xenarthrans.

Gibb GC, Condamine FL, Kuch M, Enk J, Moraes-Barros N, Superina M, Poinar HN, Delsuc F.

Mol Biol Evol. 2016 Mar;33(3):621-42. doi: 10.1093/molbev/msv250. Epub 2015 Nov 9.


ANISEED 2015: a digital framework for the comparative developmental biology of ascidians.

Brozovic M, Martin C, Dantec C, Dauga D, Mendez M, Simion P, Percher M, Laporte B, Scornavacca C, Di Gregorio A, Fujiwara S, Gineste M, Lowe EK, Piette J, Racioppi C, Ristoratore F, Sasakura Y, Takatori N, Brown TC, Delsuc F, Douzery E, Gissi C, McDougall A, Nishida H, Sawada H, Swalla BJ, Yasuo H, Lemaire P.

Nucleic Acids Res. 2016 Jan 4;44(D1):D808-18. doi: 10.1093/nar/gkv966. Epub 2015 Sep 29.


Evolutionary analysis of selective constraints identifies ameloblastin (AMBN) as a potential candidate for amelogenesis imperfecta.

Delsuc F, Gasse B, Sire JY.

BMC Evol Biol. 2015 Jul 30;15:148. doi: 10.1186/s12862-015-0431-0.


Evolution of proteasome regulators in eukaryotes.

Fort P, Kajava AV, Delsuc F, Coux O.

Genome Biol Evol. 2015 May 4;7(5):1363-79. doi: 10.1093/gbe/evv068.


Naked but not Hairless: the pitfalls of analyses of molecular adaptation based on few genome sequence comparisons.

Delsuc F, Tilak MK.

Genome Biol Evol. 2015 Feb 20;7(3):768-74. doi: 10.1093/gbe/evv036.


OrthoMaM v8: a database of orthologous exons and coding sequences for comparative genomics in mammals.

Douzery EJ, Scornavacca C, Romiguier J, Belkhir K, Galtier N, Delsuc F, Ranwez V.

Mol Biol Evol. 2014 Jul;31(7):1923-8. doi: 10.1093/molbev/msu132. Epub 2014 Apr 9.


Thrice better than once: quality control guidelines to validate new mitogenomes.

Botero-Castro F, Delsuc F, Douzery EJ.

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):449-54. doi: 10.3109/19401736.2014.900666. Epub 2015 Sep 4.


Genome skimming by shotgun sequencing helps resolve the phylogeny of a pantropical tree family.

Malé PJ, Bardon L, Besnard G, Coissac E, Delsuc F, Engel J, Lhuillier E, Scotti-Saintagne C, Tinaut A, Chave J.

Mol Ecol Resour. 2014 Sep;14(5):966-75. doi: 10.1111/1755-0998.12246. Epub 2014 Apr 2.


Convergence of gut microbiomes in myrmecophagous mammals.

Delsuc F, Metcalf JL, Wegener Parfrey L, Song SJ, González A, Knight R.

Mol Ecol. 2014 Mar;23(6):1301-17. doi: 10.1111/mec.12501. Epub 2013 Oct 7.


Next-generation sequencing and phylogenetic signal of complete mitochondrial genomes for resolving the evolutionary history of leaf-nosed bats (Phyllostomidae).

Botero-Castro F, Tilak MK, Justy F, Catzeflis F, Delsuc F, Douzery EJ.

Mol Phylogenet Evol. 2013 Dec;69(3):728-39. doi: 10.1016/j.ympev.2013.07.003. Epub 2013 Jul 10.


Less is more in mammalian phylogenomics: AT-rich genes minimize tree conflicts and unravel the root of placental mammals.

Romiguier J, Ranwez V, Delsuc F, Galtier N, Douzery EJ.

Mol Biol Evol. 2013 Sep;30(9):2134-44. doi: 10.1093/molbev/mst116. Epub 2013 Jun 29.


Deep sequencing of mixed total DNA without barcodes allows efficient assembly of highly plastic ascidian mitochondrial genomes.

Rubinstein ND, Feldstein T, Shenkar N, Botero-Castro F, Griggio F, Mastrototaro F, Delsuc F, Douzery EJ, Gissi C, Huchon D.

Genome Biol Evol. 2013;5(6):1185-99. doi: 10.1093/gbe/evt081.


Evolutionary and mechanistic insights into substrate and product accommodation of CTP:phosphocholine cytidylyltransferase from Plasmodium falciparum.

Nagy GN, Marton L, Krámos B, Oláh J, Révész Á, Vékey K, Delsuc F, Hunyadi-Gulyás É, Medzihradszky KF, Lavigne M, Vial H, Cerdan R, Vértessy BG.

FEBS J. 2013 Jul;280(13):3132-48. doi: 10.1111/febs.12282. Epub 2013 May 24.


Phylogenomic analyses support the position of turtles as the sister group of birds and crocodiles (Archosauria).

Chiari Y, Cahais V, Galtier N, Delsuc F.

BMC Biol. 2012 Jul 27;10:65. doi: 10.1186/1741-7007-10-65.


RUNX2 tandem repeats and the evolution of facial length in placental mammals.

Pointer MA, Kamilar JM, Warmuth V, Chester SG, Delsuc F, Mundy NI, Asher RJ, Bradley BJ.

BMC Evol Biol. 2012 Jun 28;12:103. doi: 10.1186/1471-2148-12-103.

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