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Items: 15

1.

Linear filtering reveals false negatives in species interaction data.

Stock M, Poisot T, Waegeman W, De Baets B.

Sci Rep. 2017 Apr 6;7:45908. doi: 10.1038/srep45908.

2.

miSTAR: miRNA target prediction through modeling quantitative and qualitative miRNA binding site information in a stacked model structure.

Van Peer G, De Paepe A, Stock M, Anckaert J, Volders PJ, Vandesompele J, De Baets B, Waegeman W.

Nucleic Acids Res. 2017 Apr 20;45(7):e51. doi: 10.1093/nar/gkw1260.

3.

Spatially Explicit Modelling of the Belgian Major Endurance Event 'The 100 km Dodentocht'.

Van Nieuland S, Baetens JM, De Baets B.

PLoS One. 2016 Oct 20;11(10):e0164981. doi: 10.1371/journal.pone.0164981. eCollection 2016.

4.

Needles: Toward Large-Scale Genomic Prediction with Marker-by-Environment Interaction.

De Coninck A, De Baets B, Kourounis D, Verbosio F, Schenk O, Maenhout S, Fostier J.

Genetics. 2016 May;203(1):543-55. doi: 10.1534/genetics.115.179887. Epub 2016 Mar 2.

5.

Participatory Patterns in an International Air Quality Monitoring Initiative.

Sîrbu A, Becker M, Caminiti S, De Baets B, Elen B, Francis L, Gravino P, Hotho A, Ingarra S, Loreto V, Molino A, Mueller J, Peters J, Ricchiuti F, Saracino F, Servedio VD, Stumme G, Theunis J, Tria F, Van den Bossche J.

PLoS One. 2015 Aug 27;10(8):e0136763. doi: 10.1371/journal.pone.0136763. eCollection 2015.

6.

Exploring Dance Movement Data Using Sequence Alignment Methods.

Chavoshi SH, De Baets B, Neutens T, De Tré G, Van de Weghe N.

PLoS One. 2015 Jul 16;10(7):e0132452. doi: 10.1371/journal.pone.0132452. eCollection 2015.

7.

DAIRRy-BLUP: a high-performance computing approach to genomic prediction.

De Coninck A, Fostier J, Maenhout S, De Baets B.

Genetics. 2014 Jul;197(3):813-22. doi: 10.1534/genetics.114.163683. Epub 2014 Apr 15.

8.

Semantically linking molecular entities in literature through entity relationships.

Van Landeghem S, Björne J, Abeel T, De Baets B, Salakoski T, Van de Peer Y.

BMC Bioinformatics. 2012 Jun 26;13 Suppl 11:S6. doi: 10.1186/1471-2105-13-S11-S6.

9.

Prospects and limitations of full-text index structures in genome analysis.

Vyverman M, De Baets B, Fack V, Dawyndt P.

Nucleic Acids Res. 2012 Aug;40(15):6993-7015. doi: 10.1093/nar/gks408. Epub 2012 May 13. Review.

10.

Graph-based data selection for the construction of genomic prediction models.

Maenhout S, De Baets B, Haesaert G.

Genetics. 2010 Aug;185(4):1463-75. doi: 10.1534/genetics.110.116426. Epub 2010 May 17.

11.

From learning taxonomies to phylogenetic learning: integration of 16S rRNA gene data into FAME-based bacterial classification.

Slabbinck B, Waegeman W, Dawyndt P, De Vos P, De Baets B.

BMC Bioinformatics. 2010 Jan 30;11:69. doi: 10.1186/1471-2105-11-69.

12.

BioGateway: a semantic systems biology tool for the life sciences.

Antezana E, Blondé W, Egaña M, Rutherford A, Stevens R, De Baets B, Mironov V, Kuiper M.

BMC Bioinformatics. 2009 Oct 1;10 Suppl 10:S11. doi: 10.1186/1471-2105-10-S10-S11.

13.

The Cell Cycle Ontology: an application ontology for the representation and integrated analysis of the cell cycle process.

Antezana E, Egaña M, Blondé W, Illarramendi A, Bilbao I, De Baets B, Stevens R, Mironov V, Kuiper M.

Genome Biol. 2009;10(5):R58. doi: 10.1186/gb-2009-10-5-r58. Epub 2009 May 29.

14.

Error in Radar-Derived Soil Moisture due to Roughness Parameterization: An Analysis Based on Synthetical Surface Profiles.

Lievens H, Vernieuwe H, Alvarez-Mozos J, De Baets B, Verhoest NE.

Sensors (Basel). 2009;9(2):1067-93. doi: 10.3390/s90201067. Epub 2009 Feb 17.

15.

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features.

Derelle E, Ferraz C, Rombauts S, Rouzé P, Worden AZ, Robbens S, Partensky F, Degroeve S, Echeynié S, Cooke R, Saeys Y, Wuyts J, Jabbari K, Bowler C, Panaud O, Piégu B, Ball SG, Ral JP, Bouget FY, Piganeau G, De Baets B, Picard A, Delseny M, Demaille J, Van de Peer Y, Moreau H.

Proc Natl Acad Sci U S A. 2006 Aug 1;103(31):11647-52. Epub 2006 Jul 25.

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