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The Comparative Toxicogenomics Database: update 2017.

Davis AP, Grondin CJ, Johnson RJ, Sciaky D, King BL, McMorran R, Wiegers J, Wiegers TC, Mattingly CJ.

Nucleic Acids Res. 2017 Jan 4;45(D1):D972-D978. doi: 10.1093/nar/gkw838. Epub 2016 Sep 19.


Platform Synthetic Lectins for Divalent Carbohydrate Recognition in Water.

Carter TS, Mooibroek TJ, Stewart PF, Crump MP, Galan MC, Davis AP.

Angew Chem Int Ed Engl. 2016 Aug 1;55(32):9311-5. doi: 10.1002/anie.201603082. Epub 2016 Jun 17.


Generating Gene Ontology-Disease Inferences to Explore Mechanisms of Human Disease at the Comparative Toxicogenomics Database.

Davis AP, Wiegers TC, King BL, Wiegers J, Grondin CJ, Sciaky D, Johnson RJ, Mattingly CJ.

PLoS One. 2016 May 12;11(5):e0155530. doi: 10.1371/journal.pone.0155530. eCollection 2016.


Advancing Exposure Science through Chemical Data Curation and Integration in the Comparative Toxicogenomics Database.

Grondin CJ, Davis AP, Wiegers TC, King BL, Wiegers JA, Reif DM, Hoppin JA, Mattingly CJ.

Environ Health Perspect. 2016 Oct;124(10):1592-1599. Epub 2016 May 12.


BioCreative V CDR task corpus: a resource for chemical disease relation extraction.

Li J, Sun Y, Johnson RJ, Sciaky D, Wei CH, Leaman R, Davis AP, Mattingly CJ, Wiegers TC, Lu Z.

Database (Oxford). 2016 May 9;2016. pii: baw068. doi: 10.1093/database/baw068. Print 2016.


Effect of Continuous Positive Airway Pressure on Stroke Rehabilitation: A Pilot Randomized Sham-Controlled Trial.

Khot SP, Davis AP, Crane DA, Tanzi PM, Lue DL, Claflin ES, Becker KJ, Longstreth WT Jr, Watson NF, Billings ME.

J Clin Sleep Med. 2016 Jul 15;12(7):1019-26. doi: 10.5664/jcsm.5940.


Intracranial Aneurysms From Presumed Infective Endocarditis: The Dilemma of Persistently Negative Cultures.

Lockrow J, Longstreth W, Davis AP.

Neurohospitalist. 2016 Apr;6(2):80-6. doi: 10.1177/1941874415605879. Epub 2015 Sep 21. No abstract available.


Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task.

Wei CH, Peng Y, Leaman R, Davis AP, Mattingly CJ, Li J, Wiegers TC, Lu Z.

Database (Oxford). 2016 Mar 19;2016. pii: baw032. doi: 10.1093/database/baw032. Print 2016.


Synthetic Receptors for the High-Affinity Recognition of O-GlcNAc Derivatives.

Rios P, Carter TS, Mooibroek TJ, Crump MP, Lisbjerg M, Pittelkow M, Supekar NT, Boons GJ, Davis AP.

Angew Chem Int Ed Engl. 2016 Mar 1;55(10):3387-92. doi: 10.1002/anie.201510611. Epub 2016 Jan 28.


Tilting and Tumbling in Transmembrane Anion Carriers: Activity Tuning through n-Alkyl Substitution.

Edwards SJ, Marques I, Dias CM, Tromans RA, Lees NR, Félix V, Valkenier H, Davis AP.

Chemistry. 2016 Feb;22(6):2004-2011. doi: 10.1002/chem.201504057. Epub 2016 Jan 8.


Evaluation of an Inexpensive Growth Medium for Direct Detection of Escherichia coli in Temperate and Sub-Tropical Waters.

Bain RE, Woodall C, Elliott J, Arnold BF, Tung R, Morley R, du Preez M, Bartram JK, Davis AP, Gundry SW, Pedley S.

PLoS One. 2015 Oct 23;10(10):e0140997. doi: 10.1371/journal.pone.0140997. eCollection 2015.


Rapid Macrocycle Threading by a Fluorescent Dye-Polymer Conjugate in Water with Nanomolar Affinity.

Peck EM, Liu W, Spence GT, Shaw SK, Davis AP, Destecroix H, Smith BD.

J Am Chem Soc. 2015 Jul 15;137(27):8668-71. doi: 10.1021/jacs.5b03573. Epub 2015 Jun 29.


DNA methylation of the LIN28 pseudogene family.

Davis AP, Benninghoff AD, Thomas AJ, Sessions BR, White KL.

BMC Genomics. 2015 Apr 11;16:287. doi: 10.1186/s12864-015-1487-3.


High-affinity anion binding by steroidal squaramide receptors.

Edwards SJ, Valkenier H, Busschaert N, Gale PA, Davis AP.

Angew Chem Int Ed Engl. 2015 Apr 7;54(15):4592-6. doi: 10.1002/anie.201411805. Epub 2015 Feb 17.


Affinity enhancement by dendritic side chains in synthetic carbohydrate receptors.

Destecroix H, Renney CM, Mooibroek TJ, Carter TS, Stewart PF, Crump MP, Davis AP.

Angew Chem Int Ed Engl. 2015 Feb 9;54(7):2057-61. doi: 10.1002/anie.201409124. Epub 2015 Jan 21.


Visualization and quantification of transmembrane ion transport into giant unilamellar vesicles.

Valkenier H, López Mora N, Kros A, Davis AP.

Angew Chem Int Ed Engl. 2015 Feb 9;54(7):2137-41. doi: 10.1002/anie.201410200. Epub 2014 Dec 30.


The Comparative Toxicogenomics Database's 10th year anniversary: update 2015.

Davis AP, Grondin CJ, Lennon-Hopkins K, Saraceni-Richards C, Sciaky D, King BL, Wiegers TC, Mattingly CJ.

Nucleic Acids Res. 2015 Jan;43(Database issue):D914-20. doi: 10.1093/nar/gku935. Epub 2014 Oct 17.


Web services-based text-mining demonstrates broad impacts for interoperability and process simplification.

Wiegers TC, Davis AP, Mattingly CJ.

Database (Oxford). 2014 Jun 10;2014. pii: bau050. doi: 10.1093/database/bau050. Print 2014.


The diagnostic conundrum and treatment dilemma of a patient with a rapidly progressive encephalopathy.

Beatty CW, Creutzfeldt CJ, Davis AP, Hoffer Z, Khot SP.

Neurohospitalist. 2014 Jan;4(1):34-41. doi: 10.1177/1941874413496792. No abstract available.


A CTD-Pfizer collaboration: manual curation of 88,000 scientific articles text mined for drug-disease and drug-phenotype interactions.

Davis AP, Wiegers TC, Roberts PM, King BL, Lay JM, Lennon-Hopkins K, Sciaky D, Johnson R, Keating H, Greene N, Hernandez R, McConnell KJ, Enayetallah AE, Mattingly CJ.

Database (Oxford). 2013 Nov 28;2013:bat080. doi: 10.1093/database/bat080. Print 2013.

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