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Items: 1 to 20 of 116

1.

Composting-Like Conditions Are More Efficient for Enrichment and Diversity of Organisms Containing Cellulase-Encoding Genes than Submerged Cultures.

Heiss-Blanquet S, Fayolle-Guichard F, Lombard V, Hébert A, Coutinho PM, Groppi A, Barre A, Henrissat B.

PLoS One. 2016 Dec 9;11(12):e0167216. doi: 10.1371/journal.pone.0167216. eCollection 2016.

2.

The chimeric nature of the genomes of marine magnetotactic coccoid-ovoid bacteria defines a novel group of Proteobacteria.

Ji B, Zhang SD, Zhang WJ, Rouy Z, Alberto F, Santini CL, Mangenot S, Gagnot S, Philippe N, Pradel N, Zhang L, Tempel S, Li Y, Médigue C, Henrissat B, Coutinho PM, Barbe V, Talla E, Wu LF.

Environ Microbiol. 2017 Mar;19(3):1103-1119. doi: 10.1111/1462-2920.13637. Epub 2017 Feb 1.

PMID:
27902881
3.

Complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition.

Venditto I, Luis AS, Rydahl M, Schückel J, Fernandes VO, Vidal-Melgosa S, Bule P, Goyal A, Pires VM, Dourado CG, Ferreira LM, Coutinho PM, Henrissat B, Knox JP, Baslé A, Najmudin S, Gilbert HJ, Willats WG, Fontes CM.

Proc Natl Acad Sci U S A. 2016 Jun 28;113(26):7136-41. doi: 10.1073/pnas.1601558113. Epub 2016 Jun 13.

4.

Closely related fungi employ diverse enzymatic strategies to degrade plant biomass.

Benoit I, Culleton H, Zhou M, DiFalco M, Aguilar-Osorio G, Battaglia E, Bouzid O, Brouwer CPJM, El-Bushari HBO, Coutinho PM, Gruben BS, Hildén KS, Houbraken J, Barboza LAJ, Levasseur A, Majoor E, Mäkelä MR, Narang HM, Trejo-Aguilar B, van den Brink J, vanKuyk PA, Wiebenga A, McKie V, McCleary B, Tsang A, Henrissat B, de Vries RP.

Biotechnol Biofuels. 2015 Aug 1;8:107. doi: 10.1186/s13068-015-0285-0. eCollection 2015.

5.

Fast solubilization of recalcitrant cellulosic biomass by the basidiomycete fungus Laetisaria arvalis involves successive secretion of oxidative and hydrolytic enzymes.

Navarro D, Rosso MN, Haon M, Olivé C, Bonnin E, Lesage-Meessen L, Chevret D, Coutinho PM, Henrissat B, Berrin JG.

Biotechnol Biofuels. 2014 Oct 8;7(1):143. doi: 10.1186/s13068-014-0143-5. eCollection 2014.

6.

Carbohydrate-related enzymes of important Phytophthora plant pathogens.

Brouwer H, Coutinho PM, Henrissat B, de Vries RP.

Fungal Genet Biol. 2014 Nov;72:192-200. doi: 10.1016/j.fgb.2014.08.011. Epub 2014 Sep 3.

PMID:
25192612
7.

The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown.

Levasseur A, Lomascolo A, Chabrol O, Ruiz-Dueñas FJ, Boukhris-Uzan E, Piumi F, Kües U, Ram AF, Murat C, Haon M, Benoit I, Arfi Y, Chevret D, Drula E, Kwon MJ, Gouret P, Lesage-Meessen L, Lombard V, Mariette J, Noirot C, Park J, Patyshakuliyeva A, Sigoillot JC, Wiebenga A, Wösten HA, Martin F, Coutinho PM, de Vries RP, Martínez AT, Klopp C, Pontarotti P, Henrissat B, Record E.

BMC Genomics. 2014 Jun 18;15:486. doi: 10.1186/1471-2164-15-486.

8.

Comparative analyses of Podospora anserina secretomes reveal a large array of lignocellulose-active enzymes.

Poidevin L, Berrin JG, Bennati-Granier C, Levasseur A, Herpoël-Gimbert I, Chevret D, Coutinho PM, Henrissat B, Heiss-Blanquet S, Record E.

Appl Microbiol Biotechnol. 2014 Sep;98(17):7457-69. doi: 10.1007/s00253-014-5698-3. Epub 2014 Apr 3.

PMID:
24695830
9.

A novel unsaturated β-glucuronyl hydrolase involved in ulvan degradation unveils the versatility of stereochemistry requirements in family GH105.

Collén PN, Jeudy A, Sassi JF, Groisillier A, Czjzek M, Coutinho PM, Helbert W.

J Biol Chem. 2014 Feb 28;289(9):6199-211. doi: 10.1074/jbc.M113.537480. Epub 2014 Jan 9.

10.

First structural insights into α-L-arabinofuranosidases from the two GH62 glycoside hydrolase subfamilies.

Siguier B, Haon M, Nahoum V, Marcellin M, Burlet-Schiltz O, Coutinho PM, Henrissat B, Mourey L, O'Donohue MJ, Berrin JG, Tranier S, Dumon C.

J Biol Chem. 2014 Feb 21;289(8):5261-73. doi: 10.1074/jbc.M113.528133. Epub 2014 Jan 6.

11.

The carbohydrate-active enzymes database (CAZy) in 2013.

Lombard V, Golaconda Ramulu H, Drula E, Coutinho PM, Henrissat B.

Nucleic Acids Res. 2014 Jan;42(Database issue):D490-5. doi: 10.1093/nar/gkt1178. Epub 2013 Nov 21.

12.

Carbohydrate utilization and metabolism is highly differentiated in Agaricus bisporus.

Patyshakuliyeva A, Jurak E, Kohler A, Baker A, Battaglia E, de Bruijn W, Burton KS, Challen MP, Coutinho PM, Eastwood DC, Gruben BS, Mäkelä MR, Martin F, Nadal M, van den Brink J, Wiebenga A, Zhou M, Henrissat B, Kabel M, Gruppen H, de Vries RP.

BMC Genomics. 2013 Sep 30;14:663. doi: 10.1186/1471-2164-14-663.

13.

Comparative genomic analysis provides insights into the evolution and niche adaptation of marine Magnetospira sp. QH-2 strain.

Ji B, Zhang SD, Arnoux P, Rouy Z, Alberto F, Philippe N, Murat D, Zhang WJ, Rioux JB, Ginet N, Sabaty M, Mangenot S, Pradel N, Tian J, Yang J, Zhang L, Zhang W, Pan H, Henrissat B, Coutinho PM, Li Y, Xiao T, Médigue C, Barbe V, Pignol D, Talla E, Wu LF.

Environ Microbiol. 2014 Feb;16(2):525-44. doi: 10.1111/1462-2920.12180. Epub 2013 Jul 10.

PMID:
23841906
14.

Multiple rewards from a treasure trove of novel glycoside hydrolase and polysaccharide lyase structures: new folds, mechanistic details, and evolutionary relationships.

Fushinobu S, Alves VD, Coutinho PM.

Curr Opin Struct Biol. 2013 Oct;23(5):652-9. doi: 10.1016/j.sbi.2013.06.001. Epub 2013 Jun 28. Review.

PMID:
23816329
15.

Genome of the red alga Porphyridium purpureum.

Bhattacharya D, Price DC, Chan CX, Qiu H, Rose N, Ball S, Weber AP, Arias MC, Henrissat B, Coutinho PM, Krishnan A, Zäuner S, Morath S, Hilliou F, Egizi A, Perrineau MM, Yoon HS.

Nat Commun. 2013;4:1941. doi: 10.1038/ncomms2931.

16.

Insights into exo- and endoglucanase activities of family 6 glycoside hydrolases from Podospora anserina.

Poidevin L, Feliu J, Doan A, Berrin JG, Bey M, Coutinho PM, Henrissat B, Record E, Heiss-Blanquet S.

Appl Environ Microbiol. 2013 Jul;79(14):4220-9. doi: 10.1128/AEM.00327-13. Epub 2013 May 3.

17.

Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes.

Levasseur A, Drula E, Lombard V, Coutinho PM, Henrissat B.

Biotechnol Biofuels. 2013 Mar 21;6(1):41. doi: 10.1186/1754-6834-6-41.

18.

How nature can exploit nonspecific catalytic and carbohydrate binding modules to create enzymatic specificity.

Cuskin F, Flint JE, Gloster TM, Morland C, Baslé A, Henrissat B, Coutinho PM, Strazzulli A, Solovyova AS, Davies GJ, Gilbert HJ.

Proc Natl Acad Sci U S A. 2012 Dec 18;109(51):20889-94. doi: 10.1073/pnas.1212034109. Epub 2012 Dec 3.

19.

Cello-oligosaccharide oxidation reveals differences between two lytic polysaccharide monooxygenases (family GH61) from Podospora anserina.

Bey M, Zhou S, Poidevin L, Henrissat B, Coutinho PM, Berrin JG, Sigoillot JC.

Appl Environ Microbiol. 2013 Jan;79(2):488-96. doi: 10.1128/AEM.02942-12. Epub 2012 Nov 2.

20.

Effects of dietary fiber on the feline gastrointestinal metagenome.

Barry KA, Middelbos IS, Vester Boler BM, Dowd SE, Suchodolski JS, Henrissat B, Coutinho PM, White BA, Fahey GC Jr, Swanson KS.

J Proteome Res. 2012 Dec 7;11(12):5924-33. doi: 10.1021/pr3006809. Epub 2012 Nov 5.

PMID:
23075436

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