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Items: 1 to 20 of 119


Long-Term Impact of Field Applications of Sewage Sludge on Soil Antibiotic Resistome.

Xie WY, McGrath SP, Su JQ, Hirsch PR, Clark IM, Shen Q, Zhu YG, Zhao FJ.

Environ Sci Technol. 2016 Dec 6;50(23):12602-12611. Epub 2016 Nov 23.


Erratum: Pseudomonas spp. diversity is negatively associated with suppression of the wheat take-all pathogen.

Mehrabi Z, McMillan VE, Clark IM, Canning G, Hammond-Kosack KE, Preston G, Hirsch PR, Mauchline TH.

Sci Rep. 2016 Oct 10;6:34681. doi: 10.1038/srep34681. No abstract available.


Pseudomonas spp. diversity is negatively associated with suppression of the wheat take-all pathogen.

Mehrabi Z, McMillan VE, Clark IM, Canning G, Hammond-Kosack KE, Preston G, Hirsch PR, Mauchline TH.

Sci Rep. 2016 Aug 23;6:29905. doi: 10.1038/srep29905.


Wheat seed embryo excision enables the creation of axenic seedlings and Koch's postulates testing of putative bacterial endophytes.

Robinson RJ, Fraaije BA, Clark IM, Jackson RW, Hirsch PR, Mauchline TH.

Sci Rep. 2016 May 6;6:25581. doi: 10.1038/srep25581.


Responses of microbial community from tropical pristine coastal soil to crude oil contamination.

Morais D, Pylro V, Clark IM, Hirsch PR, Tótola MR.

PeerJ. 2016 Feb 18;4:e1733. doi: 10.7717/peerj.1733. eCollection 2016 Feb 18.


Dickkopf-3 is upregulated in osteoarthritis and has a chondroprotective role.

Snelling SJ, Davidson RK, Swingler TE, Le LT, Barter MJ, Culley KL, Price A, Carr AJ, Clark IM.

Osteoarthritis Cartilage. 2016 May;24(5):883-91. doi: 10.1016/j.joca.2015.11.021. Epub 2015 Dec 12.


The microRNA-29 family in cartilage homeostasis and osteoarthritis.

Le LT, Swingler TE, Crowe N, Vincent TL, Barter MJ, Donell ST, Delany AM, Dalmay T, Young DA, Clark IM.

J Mol Med (Berl). 2016 May;94(5):583-96. doi: 10.1007/s00109-015-1374-z. Epub 2015 Dec 19.


Detecting new microRNAs in human osteoarthritic chondrocytes identifies miR-3085 as a human, chondrocyte-selective, microRNA.

Crowe N, Swingler TE, Le LT, Barter MJ, Wheeler G, Pais H, Donell ST, Young DA, Dalmay T, Clark IM.

Osteoarthritis Cartilage. 2016 Mar;24(3):534-43. doi: 10.1016/j.joca.2015.10.002. Epub 2015 Oct 20.


An analysis of Pseudomonas genomic diversity in take-all infected wheat fields reveals the lasting impact of wheat cultivars on the soil microbiota.

Mauchline TH, Chedom-Fotso D, Chandra G, Samuels T, Greenaway N, Backhaus A, McMillan V, Canning G, Powers SJ, Hammond-Kosack KE, Hirsch PR, Clark IM, Mehrabi Z, Roworth J, Burnell J, Malone JG.

Environ Microbiol. 2015 Nov;17(11):4764-78. doi: 10.1111/1462-2920.13038. Epub 2015 Oct 6.


Genome-Wide MicroRNA and Gene Analysis of Mesenchymal Stem Cell Chondrogenesis Identifies an Essential Role and Multiple Targets for miR-140-5p.

Barter MJ, Tselepi M, Gómez R, Woods S, Hui W, Smith GR, Shanley DP, Clark IM, Young DA.

Stem Cells. 2015 Nov;33(11):3266-80. doi: 10.1002/stem.2093. Epub 2015 Jul 29.


Over 150 years of long-term fertilization alters spatial scaling of microbial biodiversity.

Liang Y, Wu L, Clark IM, Xue K, Yang Y, Van Nostrand JD, Deng Y, He Z, McGrath S, Storkey J, Hirsch PR, Sun B, Zhou J.

MBio. 2015 Apr 7;6(2). pii: e00240-15. doi: 10.1128/mBio.00240-15.


Metatranscriptomic census of active protists in soils.

Geisen S, Tveit AT, Clark IM, Richter A, Svenning MM, Bonkowski M, Urich T.

ISME J. 2015 Oct;9(10):2178-90. doi: 10.1038/ismej.2015.30. Epub 2015 Mar 27.


Soil pH determines microbial diversity and composition in the park grass experiment.

Zhalnina K, Dias R, de Quadros PD, Davis-Richardson A, Camargo FA, Clark IM, McGrath SP, Hirsch PR, Triplett EW.

Microb Ecol. 2015 Feb;69(2):395-406. doi: 10.1007/s00248-014-0530-2. Epub 2014 Nov 14.


Data analysis for 16S microbial profiling from different benchtop sequencing platforms.

Pylro VS, Roesch LF, Morais DK, Clark IM, Hirsch PR, Tótola MR.

J Microbiol Methods. 2014 Dec;107:30-7. doi: 10.1016/j.mimet.2014.08.018. Epub 2014 Sep 3.


The potential for dietary factors to prevent or treat osteoarthritis.

Green JA, Hirst-Jones KL, Davidson RK, Jupp O, Bao Y, MacGregor AJ, Donell ST, Cassidy A, Clark IM.

Proc Nutr Soc. 2014 May;73(2):278-88. doi: 10.1017/S0029665113003935. Epub 2014 Feb 26. Review.


Novel Ex Vivo Culture Method for the Study of Dupuytren's Disease: Effects of TGFβ Type 1 Receptor Modulation by Antisense Oligonucleotides.

Karkampouna S, Kruithof BP, Kloen P, Obdeijn MC, van der Laan AM, Tanke HJ, Kemaladewi DU, Hoogaars WM, 't Hoen PA, Aartsma-Rus A, Clark IM, Ten Dijke P, Goumans MJ, Kruithof-de Julio M.

Mol Ther Nucleic Acids. 2014 Jan 21;3:e142. doi: 10.1038/mtna.2013.69.


Sulforaphane represses matrix-degrading proteases and protects cartilage from destruction in vitro and in vivo.

Davidson RK, Jupp O, de Ferrars R, Kay CD, Culley KL, Norton R, Driscoll C, Vincent TL, Donell ST, Bao Y, Clark IM.

Arthritis Rheum. 2013 Dec;65(12):3130-40. doi: 10.1002/art.38133.


Novel WWP2 ubiquitin ligase isoforms as potential prognostic markers and molecular targets in cancer.

Soond SM, Smith PG, Wahl L, Swingler TE, Clark IM, Hemmings AM, Chantry A.

Biochim Biophys Acta. 2013 Dec;1832(12):2127-35. doi: 10.1016/j.bbadis.2013.08.001. Epub 2013 Aug 9.


Review: the role of microRNAs in osteoarthritis and chondrogenesis.

Le LT, Swingler TE, Clark IM.

Arthritis Rheum. 2013 Aug;65(8):1963-74. doi: 10.1002/art.37990. Review. No abstract available.

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