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Items: 1 to 20 of 271

  • The following terms were not found in PubMed: 225088[Grant Number], CA232161[Grant Number], CA238720[Grant Number], CA238475[Grant Number], CA227544[Grant Number].

Cyclin E Overexpression in Human Mammary Epithelial Cells Promotes Epithelial Cancer-Specific Copy Number Alterations.

Giraldez S, Tamayo P, Wineinger N, Kim W, Reed SI.

iScience. 2019 Aug 27;19:850-859. doi: 10.1016/j.isci.2019.08.043. [Epub ahead of print]


Reproducible biomedical benchmarking in the cloud: lessons from crowd-sourced data challenges.

Ellrott K, Buchanan A, Creason A, Mason M, Schaffter T, Hoff B, Eddy J, Chilton JM, Yu T, Stuart JM, Saez-Rodriguez J, Stolovitzky G, Boutros PC, Guinney J.

Genome Biol. 2019 Sep 10;20(1):195. doi: 10.1186/s13059-019-1794-0.


Pathway activity profiling of growth factor receptor network and stemness pathways differentiates metaplastic breast cancer histological subtypes.

McQuerry JA, Jenkins DF, Yost SE, Zhang Y, Schmolze D, Johnson WE, Yuan Y, Bild AH.

BMC Cancer. 2019 Sep 5;19(1):881. doi: 10.1186/s12885-019-6052-z.


Systems Biology of Cancer Metastasis.

Suhail Y, Cain MP, Vanaja K, Kurywchak PA, Levchenko A, Kalluri R, Kshitiz.

Cell Syst. 2019 Aug 28;9(2):109-127. doi: 10.1016/j.cels.2019.07.003. Review.


Systematic Immunotherapy Target Discovery Using Genome-Scale In Vivo CRISPR Screens in CD8 T Cells.

Dong MB, Wang G, Chow RD, Ye L, Zhu L, Dai X, Park JJ, Kim HR, Errami Y, Guzman CD, Zhou X, Chen KY, Renauer PA, Du Y, Shen J, Lam SZ, Zhou JJ, Lannin DR, Herbst RS, Chen S.

Cell. 2019 Aug 22;178(5):1189-1204.e23. doi: 10.1016/j.cell.2019.07.044.


Quantitative Insights into Age-Associated DNA-Repair Inefficiency in Single Cells.

Young TZ, Liu P, Urbonaite G, Acar M.

Cell Rep. 2019 Aug 20;28(8):2220-2230.e7. doi: 10.1016/j.celrep.2019.07.082.


Mitogenic and progenitor gene programmes in single pilocytic astrocytoma cells.

Reitman ZJ, Paolella BR, Bergthold G, Pelton K, Becker S, Jones R, Sinai CE, Malkin H, Huang Y, Grimmet L, Herbert ZT, Sun Y, Weatherbee JL, Alberta JA, Daley JF, Rozenblatt-Rosen O, Condurat AL, Qian K, Khadka P, Segal RA, Haas-Kogan D, Filbin MG, Suva ML, Regev A, Stiles CD, Kieran MW, Goumnerova L, Ligon KL, Shalek AK, Bandopadhayay P, Beroukhim R.

Nat Commun. 2019 Aug 19;10(1):3731. doi: 10.1038/s41467-019-11493-2.


Variational Autoencoding Tissue Response to Microenvironment Perturbation.

Schau GF, Thibault G, Dane MA, Gray JW, Heiser LM, Chang YH.

Proc SPIE Int Soc Opt Eng. 2019 Feb;10949. pii: 109491M. doi: 10.1117/12.2512660. Epub 2019 Mar 15.


Cancer cell evolution through the ages.

Maley CC, Shibata D.

Science. 2019 Aug 2;365(6452):440-441. doi: 10.1126/science.aay2859. No abstract available.


Rad5 dysregulation drives hyperactive recombination at replication forks resulting in cisplatin sensitivity and genome instability.

Bryant EE, Šunjevarić I, Berchowitz L, Rothstein R, Reid RJD.

Nucleic Acids Res. 2019 Jul 27. pii: gkz631. doi: 10.1093/nar/gkz631. [Epub ahead of print]


Elevated neoantigen levels in tumors with somatic mutations in the HLA-A, HLA-B, HLA-C and B2M genes.

Castro A, Ozturk K, Pyke RM, Xian S, Zanetti M, Carter H.

BMC Med Genomics. 2019 Jul 25;12(Suppl 6):107. doi: 10.1186/s12920-019-0544-1.


xml2jupyter: Mapping parameters between XML and Jupyter widgets.

Heiland R, Mishler D, Zhang T, Bower E, Macklin P.

J Open Source Softw. 2019;4(39). doi: 10.21105/joss.01408. Epub 2019 Jul 1.


Small Cell Lung Cancer Therapeutic Responses Through Fractal Measurements: From Radiology to Mitochondrial Biology.

Mambetsariev I, Mirzapoiazova T, Lennon F, Jolly MK, Li H, Nasser MW, Vora L, Kulkarni P, Batra SK, Salgia R.

J Clin Med. 2019 Jul 16;8(7). pii: E1038. doi: 10.3390/jcm8071038.


PEAK3/C19orf35 pseudokinase, a new NFK3 kinase family member, inhibits CrkII through dimerization.

Lopez ML, Lo M, Kung JE, Dudkiewicz M, Jang GM, Von Dollen J, Johnson JR, Krogan NJ, Pawłowski K, Jura N.

Proc Natl Acad Sci U S A. 2019 Jul 30;116(31):15495-15504. doi: 10.1073/pnas.1906360116. Epub 2019 Jul 16.


A Non-canonical Role of YAP/TEAD Is Required for Activation of Estrogen-Regulated Enhancers in Breast Cancer.

Zhu C, Li L, Zhang Z, Bi M, Wang H, Su W, Hernandez K, Liu P, Chen J, Chen M, Huang TH, Chen L, Liu Z.

Mol Cell. 2019 Aug 22;75(4):791-806.e8. doi: 10.1016/j.molcel.2019.06.010. Epub 2019 Jul 11.


VISAGE Reveals a Targetable Mitotic Spindle Vulnerability in Cancer Cells.

Patterson JC, Joughin BA, Prota AE, Mühlethaler T, Jonas OH, Whitman MA, Varmeh S, Chen S, Balk SP, Steinmetz MO, Lauffenburger DA, Yaffe MB.

Cell Syst. 2019 Jul 24;9(1):74-92.e8. doi: 10.1016/j.cels.2019.05.009. Epub 2019 Jul 10.


Integration of machine learning and mechanistic models accurately predicts variation in cell density of glioblastoma using multiparametric MRI.

Gaw N, Hawkins-Daarud A, Hu LS, Yoon H, Wang L, Xu Y, Jackson PR, Singleton KW, Baxter LC, Eschbacher J, Gonzales A, Nespodzany A, Smith K, Nakaji P, Mitchell JR, Wu T, Swanson KR, Li J.

Sci Rep. 2019 Jul 11;9(1):10063. doi: 10.1038/s41598-019-46296-4.


Mapping the protein-protein and genetic interactions of cancer to guide precision medicine.

Bouhaddou M, Eckhardt M, Chi Naing ZZ, Kim M, Ideker T, Krogan NJ.

Curr Opin Genet Dev. 2019 Feb;54:110-117. doi: 10.1016/j.gde.2019.04.005. Epub 2019 Jul 6. Review.


Inference of Population Structure from Time-Series Genotype Data.

Joseph TA, Pe'er I.

Am J Hum Genet. 2019 Aug 1;105(2):317-333. doi: 10.1016/j.ajhg.2019.06.002. Epub 2019 Jun 27.


Switch-like enhancement of epithelial-mesenchymal transition by YAP through feedback regulation of WT1 and Rho-family GTPases.

Park J, Kim DH, Shah SR, Kim HN, Kshitiz, Kim P, Quiñones-Hinojosa A, Levchenko A.

Nat Commun. 2019 Jun 26;10(1):2797. doi: 10.1038/s41467-019-10729-5.

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