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Items: 19

1.
2.

RNA sequencing-based analysis of the spleen transcriptome following infectious bronchitis virus infection of chickens selected for different mannose-binding lectin serum concentrations.

Hamzić E, Kjærup RB, Mach N, Minozzi G, Strozzi F, Gualdi V, Williams JL, Chen J, Wattrang E, Buitenhuis B, Juul-Madsen HR, Dalgaard TS.

BMC Genomics. 2016 Jan 27;17:82. doi: 10.1186/s12864-016-2403-1.

3.

Ultra-deep sequencing of VHSV isolates contributes to understanding the role of viral quasispecies.

Schönherz AA, Lorenzen N, Guldbrandtsen B, Buitenhuis B, Einer-Jensen K.

Vet Res. 2016 Jan 8;47:10. doi: 10.1186/s13567-015-0298-5.

4.

Genome-wide association study and biological pathway analysis of the Eimeria maxima response in broilers.

Hamzić E, Buitenhuis B, Hérault F, Hawken R, Abrahamsen MS, Servin B, Elsen JM, Pinard-van der Laan MH, Bed'Hom B.

Genet Sel Evol. 2015 Nov 25;47:91. doi: 10.1186/s12711-015-0170-0.

5.

Genome-wide association study for female fertility in Nordic Red cattle.

Höglund JK, Buitenhuis B, Guldbrandtsen B, Lund MS, Sahana G.

BMC Genet. 2015 Sep 15;16:110. doi: 10.1186/s12863-015-0269-x.

6.

Estimation of genetic parameters and detection of quantitative trait loci for minerals in Danish Holstein and Danish Jersey milk.

Buitenhuis B, Poulsen NA, Larsen LB, Sehested J.

BMC Genet. 2015 May 21;16:52. doi: 10.1186/s12863-015-0209-9.

7.

Genome-wide association and biological pathway analysis for milk-fat composition in Danish Holstein and Danish Jersey cattle.

Buitenhuis B, Janss LL, Poulsen NA, Larsen LB, Larsen MK, Sørensen P.

BMC Genomics. 2014 Dec 15;15:1112. doi: 10.1186/1471-2164-15-1112.

8.

Fine mapping QTL for female fertility on BTA04 and BTA13 in dairy cattle using HD SNP and sequence data.

Höglund JK, Sahana G, Brøndum RF, Guldbrandtsen B, Buitenhuis B, Lund MS.

BMC Genomics. 2014 Sep 13;15:790. doi: 10.1186/1471-2164-15-790.

9.

Genetic parameters for milk fatty acids in Danish Holstein cattle based on SNP markers using a Bayesian approach.

Krag K, Poulsen NA, Larsen MK, Larsen LB, Janss LL, Buitenhuis B.

BMC Genet. 2013 Sep 11;14:79. doi: 10.1186/1471-2156-14-79.

10.

Transcriptional profiling of the bovine hepatic response to experimentally induced E. coli mastitis.

Jørgensen HB, Buitenhuis B, Røntved CM, Jiang L, Ingvartsen KL, Sørensen P.

Physiol Genomics. 2012 Jun 1;44(11):595-606. doi: 10.1152/physiolgenomics.00084.2011. Epub 2012 Apr 10.

11.

In depth analysis of genes and pathways of the mammary gland involved in the pathogenesis of bovine Escherichia coli-mastitis.

Buitenhuis B, Røntved CM, Edwards SM, Ingvartsen KL, Sørensen P.

BMC Genomics. 2011 Feb 28;12:130. doi: 10.1186/1471-2164-12-130.

12.

Differentially expressed genes for aggressive pecking behaviour in laying hens.

Buitenhuis B, Hedegaard J, Janss L, Sørensen P.

BMC Genomics. 2009 Nov 19;10:544. doi: 10.1186/1471-2164-10-544.

13.

Gene set analysis methods applied to chicken microarray expression data.

Skarman A, Jiang L, Henrik H, Buitenhuis B, Hedegaard J, Conley LN, Sørensen P.

BMC Proc. 2009 Jul 16;3 Suppl 4:S8. doi: 10.1186/1753-6561-3-S4-S8.

14.

Methods for interpreting lists of affected genes obtained in a DNA microarray experiment.

Hedegaard J, Arce C, Bicciato S, Bonnet A, Buitenhuis B, Collado-Romero M, Conley LN, SanCristobal M, Ferrari F, Garrido JJ, Groenen MA, Hornshøj H, Hulsegge I, Jiang L, Jiménez-Marín Á, Kommadath A, Lagarrigue S, Leunissen JA, Liaubet L, Neerincx PB, Nie H, Poel JV, Prickett D, Ramirez-Boo M, Rebel JM, Robert-Granié C, Skarman A, Smits MA, Sørensen P, Tosser-Klopp G, Watson M.

BMC Proc. 2009 Jul 16;3 Suppl 4:S5.

15.

Using microarrays to identify positional candidate genes for QTL: the case study of ACTH response in pigs.

Jouffe V, Rowe S, Liaubet L, Buitenhuis B, Hornshøj H, SanCristobal M, Mormède P, de Koning DJ.

BMC Proc. 2009 Jul 16;3 Suppl 4:S14. doi: 10.1186/1753-6561-3-S4-S14.

16.

Analysis of the real EADGENE data set: multivariate approaches and post analysis (open access publication).

Sørensen P, Bonnet A, Buitenhuis B, Closset R, Déjean S, Delmas C, Duval M, Glass L, Hedegaard J, Hornshøj H, Hulsegge I, Jaffrézic F, Jensen K, Jiang L, de Koning DJ, Lê Cao KA, Nie H, Petzl W, Pool MH, Robert-Granié C, San Cristobal M, Lund MS, van Schothorst EM, Schuberth HJ, Seyfert HM, Tosser-Klopp G, Waddington D, Watson M, Yang W, Zerbe H.

Genet Sel Evol. 2007 Nov-Dec;39(6):651-68. Epub 2007 Dec 6.

17.

Analysis of the real EADGENE data set: comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (open access publication).

Jaffrézic F, de Koning DJ, Boettcher PJ, Bonnet A, Buitenhuis B, Closset R, Déjean S, Delmas C, Detilleux JC, Dovc P, Duval M, Foulley JL, Hedegaard J, Hornshøj H, Hulsegge I, Janss L, Jensen K, Jiang L, Lavric M, Lê Cao KA, Lund MS, Malinverni R, Marot G, Nie H, Petzl W, Pool MH, Robert-Granié C, San Cristobal M, van Schothorst EM, Schuberth HJ, Sørensen P, Stella A, Tosser-Klopp G, Waddington D, Watson M, Yang W, Zerbe H, Seyfert HM.

Genet Sel Evol. 2007 Nov-Dec;39(6):633-50. Epub 2007 Dec 6.

18.

The EADGENE Microarray Data Analysis Workshop (open access publication).

de Koning DJ, Jaffrézic F, Lund MS, Watson M, Channing C, Hulsegge I, Pool MH, Buitenhuis B, Hedegaard J, Hornshøj H, Jiang L, Sørensen P, Marot G, Delmas C, Lê Cao KA, San Cristobal M, Baron MD, Malinverni R, Stella A, Brunner RM, Seyfert HM, Jensen K, Mouzaki D, Waddington D, Jiménez-Marín A, Pérez-Alegre M, Pérez-Reinado E, Closset R, Detilleux JC, Dovc P, Lavric M, Nie H, Janss L.

Genet Sel Evol. 2007 Nov-Dec;39(6):621-31. Epub 2007 Dec 6.

19.

Detection of QTL for innate: non-specific antibody levels binding LPS and LTA in two independent populations of laying hens.

Siwek M, Buitenhuis B, Cornelissen S, Nieuwland M, Knol EF, Crooijmans R, Groenen M, Parmentier H, van der Poel J.

Dev Comp Immunol. 2006;30(7):659-66. Epub 2005 Oct 5.

PMID:
16368139

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