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Items: 18

1.

CancerGD: A Resource for Identifying and Interpreting Genetic Dependencies in Cancer.

Bridgett S, Campbell J, Lord CJ, Ryan CJ.

Cell Syst. 2017 Jul 26;5(1):82-86.e3. doi: 10.1016/j.cels.2017.06.002. Epub 2017 Jul 12.

2.

RNA-Sequencing data supports the existence of novel VEGFA splicing events but not of VEGFAxxxb isoforms.

Bridgett S, Dellett M, Simpson DA.

Sci Rep. 2017 Mar 3;7(1):58. doi: 10.1038/s41598-017-00100-3.

3.

Sequence and Expression of Complement Factor H Gene Cluster Variants and Their Roles in Age-Related Macular Degeneration Risk.

Hughes AE, Bridgett S, Meng W, Li M, Curcio CA, Stambolian D, Bradley DT.

Invest Ophthalmol Vis Sci. 2016 May 1;57(6):2763-9. doi: 10.1167/iovs.15-18744.

4.

Rare CFH mutations and early-onset age-related macular degeneration.

Hughes AE, Meng W, Bridgett S, Bradley DT.

Acta Ophthalmol. 2016 May;94(3):e247-8. doi: 10.1111/aos.12822. Epub 2015 Aug 13. No abstract available.

5.

Novel insights into the insect trancriptome response to a natural DNA virus.

McTaggart SJ, Hannah T, Bridgett S, Garbutt JS, Kaur G, Boots M.

BMC Genomics. 2015 Apr 17;16:310. doi: 10.1186/s12864-015-1499-z.

6.

Small RNAs from plants, bacteria and fungi within the order Hypocreales are ubiquitous in human plasma.

Beatty M, Guduric-Fuchs J, Brown E, Bridgett S, Chakravarthy U, Hogg RE, Simpson DA.

BMC Genomics. 2014 Oct 25;15:933. doi: 10.1186/1471-2164-15-933.

7.

Quality control of next-generation sequencing data without a reference.

Trivedi UH, C├ęzard T, Bridgett S, Montazam A, Nichols J, Blaxter M, Gharbi K.

Front Genet. 2014 May 6;5:111. doi: 10.3389/fgene.2014.00111. eCollection 2014.

8.

Fold or hold: experimental evolution in vitro.

Collins S, Rambaut A, Bridgett SJ.

J Evol Biol. 2013 Oct;26(10):2123-34. doi: 10.1111/jeb.12233. Epub 2013 Sep 4.

9.

Secretion of protective antigens by tissue-stage nematode larvae revealed by proteomic analysis and vaccination-induced sterile immunity.

Hewitson JP, Ivens AC, Harcus Y, Filbey KJ, McSorley HJ, Murray J, Bridgett S, Ashford D, Dowle AA, Maizels RM.

PLoS Pathog. 2013 Aug;9(8):e1003492. doi: 10.1371/journal.ppat.1003492. Epub 2013 Aug 15.

10.

Biomineral proteins from Mytilus edulis mantle tissue transcriptome.

Freer A, Bridgett S, Jiang J, Cusack M.

Mar Biotechnol (NY). 2014 Feb;16(1):34-45. doi: 10.1007/s10126-013-9516-1. Epub 2013 Jul 5.

11.

The transcriptome of the invasive eel swimbladder nematode parasite Anguillicola crassus.

Heitlinger E, Bridgett S, Montazam A, Taraschewski H, Blaxter M.

BMC Genomics. 2013 Feb 8;14:87. doi: 10.1186/1471-2164-14-87.

12.

Rates of assay success and genotyping error when single nucleotide polymorphism genotyping in non-model organisms: a case study in the Antarctic fur seal.

Hoffman JI, Tucker R, Bridgett SJ, Clark MS, Forcada J, Slate J.

Mol Ecol Resour. 2012 Sep;12(5):861-72. doi: 10.1111/j.1755-0998.2012.03158.x. Epub 2012 Jun 23.

PMID:
22727236
13.

Transcriptional changes in Teladorsagia circumcincta upon encountering host tissue of differing immune status.

Halliday AM, Lainson FA, Yaga R, Inglis NF, Bridgett S, Nath M, Knox DP.

Parasitology. 2012 Mar;139(3):387-405. doi: 10.1017/S0031182011002010. Epub 2012 Jan 5.

PMID:
22216973
14.

Polyphenism in social insects: insights from a transcriptome-wide analysis of gene expression in the life stages of the key pollinator, Bombus terrestris.

Colgan TJ, Carolan JC, Bridgett SJ, Sumner S, Blaxter ML, Brown MJ.

BMC Genomics. 2011 Dec 20;12:623. doi: 10.1186/1471-2164-12-623.

15.

Gene conversion rapidly generates major histocompatibility complex diversity in recently founded bird populations.

Spurgin LG, van Oosterhout C, Illera JC, Bridgett S, Gharbi K, Emerson BC, Richardson DS.

Mol Ecol. 2011 Dec;20(24):5213-25. doi: 10.1111/j.1365-294X.2011.05367.x. Epub 2011 Nov 22.

PMID:
22106868
16.

Proteomic analysis of secretory products from the model gastrointestinal nematode Heligmosomoides polygyrus reveals dominance of venom allergen-like (VAL) proteins.

Hewitson JP, Harcus Y, Murray J, van Agtmaal M, Filbey KJ, Grainger JR, Bridgett S, Blaxter ML, Ashton PD, Ashford DA, Curwen RS, Wilson RA, Dowle AA, Maizels RM.

J Proteomics. 2011 Aug 24;74(9):1573-94. doi: 10.1016/j.jprot.2011.06.002. Epub 2011 Jun 29.

17.

Comparative genome analysis provides insights into the evolution and adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum.

Green S, Studholme DJ, Laue BE, Dorati F, Lovell H, Arnold D, Cottrell JE, Bridgett S, Blaxter M, Huitema E, Thwaites R, Sharp PM, Jackson RW, Kamoun S.

PLoS One. 2010 Apr 19;5(4):e10224. doi: 10.1371/journal.pone.0010224.

18.

InCa-SiteFinder: a method for structure-based prediction of inositol and carbohydrate binding sites on proteins.

Kulharia M, Bridgett SJ, Goody RS, Jackson RM.

J Mol Graph Model. 2009 Oct;28(3):297-303. doi: 10.1016/j.jmgm.2009.08.009. Epub 2009 Aug 27.

PMID:
19762259

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