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Items: 1 to 20 of 135

1.

Genome-Wide Association Study for Identification and Validation of Novel SNP Markers for Sr6 Stem Rust Resistance Gene in Bread Wheat.

Mourad AMI, Sallam A, Belamkar V, Wegulo S, Bowden R, Jin Y, Mahdy E, Bakheit B, El-Wafaa AA, Poland J, Baenziger PS.

Front Plant Sci. 2018 Mar 27;9:380. doi: 10.3389/fpls.2018.00380. eCollection 2018.

2.

A practical solution for preserving single cells for RNA sequencing.

Attar M, Sharma E, Li S, Bryer C, Cubitt L, Broxholme J, Lockstone H, Kinchen J, Simmons A, Piazza P, Buck D, Livak KJ, Bowden R.

Sci Rep. 2018 Feb 1;8(1):2151. doi: 10.1038/s41598-018-20372-7.

3.

Short heatwaves during fluctuating incubation regimes produce females under temperature-dependent sex determination with implications for sex ratios in nature.

Carter AW, Sadd BM, Tuberville TD, Paitz RT, Bowden RM.

Sci Rep. 2018 Jan 8;8(1):3. doi: 10.1038/s41598-017-17708-0.

4.

Severe infections emerge from commensal bacteria by adaptive evolution.

Young BC, Wu CH, Gordon NC, Cole K, Price JR, Liu E, Sheppard AE, Perera S, Charlesworth J, Golubchik T, Iqbal Z, Bowden R, Massey RC, Paul J, Crook DW, Peto TE, Walker AS, Llewelyn MJ, Wyllie DH, Wilson DJ.

Elife. 2017 Dec 19;6. pii: e30637. doi: 10.7554/eLife.30637.

5.

Seasonal shifts in sex ratios are mediated by maternal effects and fluctuating incubation temperatures.

Carter AW, Bowden RM, Paitz RT.

Funct Ecol. 2017 Apr;31(4):876-884. doi: 10.1111/1365-2435.12801. Epub 2016 Dec 19.

6.

Divergent and convergent modes of interaction between wheat and Puccinia graminis f. sp. tritici isolates revealed by the comparative gene co-expression network and genome analyses.

Rutter WB, Salcedo A, Akhunova A, He F, Wang S, Liang H, Bowden RL, Akhunov E.

BMC Genomics. 2017 Apr 12;18(1):291. doi: 10.1186/s12864-017-3678-6.

7.

Evidence for the evolutionary steps leading to mecA-mediated β-lactam resistance in staphylococci.

Rolo J, Worning P, Boye Nielsen J, Sobral R, Bowden R, Bouchami O, Damborg P, Guardabassi L, Perreten V, Westh H, Tomasz A, de Lencastre H, Miragaia M.

PLoS Genet. 2017 Apr 10;13(4):e1006674. doi: 10.1371/journal.pgen.1006674. eCollection 2017 Apr.

8.

Genome-to-genome analysis highlights the effect of the human innate and adaptive immune systems on the hepatitis C virus.

Ansari MA, Pedergnana V, L C Ip C, Magri A, Von Delft A, Bonsall D, Chaturvedi N, Bartha I, Smith D, Nicholson G, McVean G, Trebes A, Piazza P, Fellay J, Cooke G, Foster GR; STOP-HCV Consortium, Hudson E, McLauchlan J, Simmonds P, Bowden R, Klenerman P, Barnes E, Spencer CCA.

Nat Genet. 2017 May;49(5):666-673. doi: 10.1038/ng.3835. Epub 2017 Apr 10.

9.

Evolutionary Origin of the Staphylococcal Cassette Chromosome mec (SCCmec).

Rolo J, Worning P, Nielsen JB, Bowden R, Bouchami O, Damborg P, Guardabassi L, Perreten V, Tomasz A, Westh H, de Lencastre H, Miragaia M.

Antimicrob Agents Chemother. 2017 May 24;61(6). pii: e02302-16. doi: 10.1128/AAC.02302-16. Print 2017 Jun.

10.

Recombination-Mediated Host Adaptation by Avian Staphylococcus aureus.

Murray S, Pascoe B, Méric G, Mageiros L, Yahara K, Hitchings MD, Friedmann Y, Wilkinson TS, Gormley FJ, Mack D, Bray JE, Lamble S, Bowden R, Jolley KA, Maiden MCJ, Wendlandt S, Schwarz S, Corander J, Fitzgerald JR, Sheppard SK.

Genome Biol Evol. 2017 Apr 1;9(4):830-842. doi: 10.1093/gbe/evx037.

11.

Transcriptomic profiling of purified patient-derived dopamine neurons identifies convergent perturbations and therapeutics for Parkinson's disease.

Sandor C, Robertson P, Lang C, Heger A, Booth H, Vowles J, Witty L, Bowden R, Hu M, Cowley SA, Wade-Martins R, Webber C.

Hum Mol Genet. 2017 Feb 1;26(3):552-566. doi: 10.1093/hmg/ddw412.

12.

The nature and nurture of cell heterogeneity: accounting for macrophage gene-environment interactions with single-cell RNA-Seq.

Wills QF, Mellado-Gomez E, Nolan R, Warner D, Sharma E, Broxholme J, Wright B, Lockstone H, James W, Lynch M, Gonzales M, West J, Leyrat A, Padilla-Parra S, Filippi S, Holmes C, Moore MD, Bowden R.

BMC Genomics. 2017 Jan 7;18(1):53. doi: 10.1186/s12864-016-3445-0.

13.

Evolutionary dynamics of Enterococcus faecium reveals complex genomic relationships between isolates with independent emergence of vancomycin resistance.

van Hal SJ, Ip CL, Ansari MA, Wilson DJ, Espedido BA, Jensen SO, Bowden R.

Microb Genom. 2016 Jan 19;2(1). doi: 10.1099/mgen.0.000048.

14.

Comparison of Next-Generation Sequencing Technologies for Comprehensive Assessment of Full-Length Hepatitis C Viral Genomes.

Thomson E, Ip CL, Badhan A, Christiansen MT, Adamson W, Ansari MA, Bibby D, Breuer J, Brown A, Bowden R, Bryant J, Bonsall D, Da Silva Filipe A, Hinds C, Hudson E, Klenerman P, Lythgow K, Mbisa JL, McLauchlan J, Myers R, Piazza P, Roy S, Trebes A, Sreenu VB, Witteveldt J; STOP-HCV Consortium, Barnes E, Simmonds P.

J Clin Microbiol. 2016 Oct;54(10):2470-84. doi: 10.1128/JCM.00330-16. Epub 2016 Jul 6.

15.

Pre- and Postnatal Effects of Corticosterone on Fitness-Related Traits and the Timing of Endogenous Corticosterone Production in a Songbird.

Strange MS, Bowden RM, Thompson CF, Sakaluk SK.

J Exp Zool A Ecol Genet Physiol. 2016 Jul;325(6):347-59. doi: 10.1002/jez.2022. Epub 2016 Jun 9.

16.

Elevated corticosterone during egg production elicits increased maternal investment and promotes nestling growth in a wild songbird.

Bowers EK, Bowden RM, Thompson CF, Sakaluk SK.

Horm Behav. 2016 Jul;83:6-13. doi: 10.1016/j.yhbeh.2016.05.010. Epub 2016 May 14.

17.

Correction: Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.

Harris LG, Murray S, Pascoe B, Bray J, Meric G, Mageiros L, Wilkinson TS, Jeeves R, Rohde H, Schwarz S, de Lencastre H, Miragaia M, Rolo J, Bowden R, Jolley KA, Maiden MC, Mack D, Sheppard SK.

PLoS One. 2016 Apr 21;11(4):e0154510. doi: 10.1371/journal.pone.0154510. eCollection 2016. No abstract available.

18.

Evaluation of Viremia Frequencies of a Novel Human Pegivirus by Using Bioinformatic Screening and PCR.

Bonsall D, Gregory WF, Ip CL, Donfield S, Iles J, Ansari MA, Piazza P, Trebes A, Brown A, Frater J, Pybus OG, Goulder P, Klenerman P, Bowden R, Gomperts ED, Barnes E, Kapoor A, Sharp CP, Simmonds P.

Emerg Infect Dis. 2016 Apr;22(4):671-8. doi: 10.3201/eid2204.151812.

19.

Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.

Harris LG, Murray S, Pascoe B, Bray J, Meric G, Mageiros L, Wilkinson TS, Jeeves R, Rohde H, Schwarz S, de Lencastre H, Miragaia M, Rolo J, Bowden R, Jolley KA, Maiden MC, Mack D, Sheppard SK.

PLoS One. 2016 Mar 15;11(3):e0151240. doi: 10.1371/journal.pone.0151240. eCollection 2016. Erratum in: PLoS One. 2016;11(4):e0154510. Magerios, Leonardos [corrected to Mageiros, Leonardos].

20.

MinION Analysis and Reference Consortium: Phase 1 data release and analysis.

Ip CLC, Loose M, Tyson JR, de Cesare M, Brown BL, Jain M, Leggett RM, Eccles DA, Zalunin V, Urban JM, Piazza P, Bowden RJ, Paten B, Mwaigwisya S, Batty EM, Simpson JT, Snutch TP, Birney E, Buck D, Goodwin S, Jansen HJ, O'Grady J, Olsen HE; MinION Analysis and Reference Consortium.

F1000Res. 2015 Oct 15;4:1075. doi: 10.12688/f1000research.7201.1. eCollection 2015.

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