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Items: 1 to 20 of 28

1.

Do Vertebrate Gut Metagenomes Confer Rapid Ecological Adaptation?

Alberdi A, Aizpurua O, Bohmann K, Zepeda-Mendoza ML, Gilbert MT.

Trends Ecol Evol. 2016 Sep;31(9):689-99. doi: 10.1016/j.tree.2016.06.008. Epub 2016 Jul 21. Review.

PMID:
27453351
2.

DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses.

Zepeda-Mendoza ML, Bohmann K, Carmona Baez A, Gilbert MT.

BMC Res Notes. 2016 May 3;9:255. doi: 10.1186/s13104-016-2064-9.

3.

Tag jumps illuminated--reducing sequence-to-sample misidentifications in metabarcoding studies.

Schnell IB, Bohmann K, Gilbert MT.

Mol Ecol Resour. 2015 Nov;15(6):1289-303. doi: 10.1111/1755-0998.12402. Epub 2015 Mar 20.

PMID:
25740652
4.

Ancient and modern environmental DNA.

Pedersen MW, Overballe-Petersen S, Ermini L, Sarkissian CD, Haile J, Hellstrom M, Spens J, Thomsen PF, Bohmann K, Cappellini E, Schnell IB, Wales NA, Carøe C, Campos PF, Schmidt AM, Gilbert MT, Hansen AJ, Orlando L, Willerslev E.

Philos Trans R Soc Lond B Biol Sci. 2015 Jan 19;370(1660):20130383. doi: 10.1098/rstb.2013.0383. Review.

5.

Preanalytical variables and performance of diagnostic RNA-based gene expression analysis in breast cancer.

Poremba C, Uhlendorff J, Pfitzner BM, Hennig G, Bohmann K, Bojar H, Krenn V, Brase JC, Haufe F, Averdick M, Dietel M, Kronenwett R, Denkert C.

Virchows Arch. 2014 Oct;465(4):409-17. doi: 10.1007/s00428-014-1652-0. Epub 2014 Sep 14.

6.

Second generation sequencing and morphological faecal analysis reveal unexpected foraging behaviour by Myotis nattereri (Chiroptera, Vespertilionidae) in winter.

Hope PR, Bohmann K, Gilbert MT, Zepeda-Mendoza ML, Razgour O, Jones G.

Front Zool. 2014 May 9;11:39. doi: 10.1186/1742-9994-11-39. eCollection 2014.

7.

Environmental DNA for wildlife biology and biodiversity monitoring.

Bohmann K, Evans A, Gilbert MT, Carvalho GR, Creer S, Knapp M, Yu DW, de Bruyn M.

Trends Ecol Evol. 2014 Jun;29(6):358-67. doi: 10.1016/j.tree.2014.04.003. Epub 2014 May 10. Review. Erratum in: Trends Ecol Evol. 2014 Aug;29(8):485.

PMID:
24821515
8.

When bugs reveal biodiversity.

Bohmann K, Schnell IB, Gilbert M.

Mol Ecol. 2013 Feb;22(4):909-11.

PMID:
23476936
9.

Decentral gene expression analysis: analytical validation of the Endopredict genomic multianalyte breast cancer prognosis test.

Kronenwett R, Bohmann K, Prinzler J, Sinn BV, Haufe F, Roth C, Averdick M, Ropers T, Windbergs C, Brase JC, Weber KE, Fisch K, Müller BM, Schmidt M, Filipits M, Dubsky P, Petry C, Dietel M, Denkert C.

BMC Cancer. 2012 Oct 5;12:456. doi: 10.1186/1471-2407-12-456.

10.

Gene-expression signature of tumor recurrence in patients with stage II and III colon cancer treated with 5'fluoruracil-based adjuvant chemotherapy.

Giráldez MD, Lozano JJ, Cuatrecasas M, Alonso-Espinaco V, Maurel J, Mármol M, Hörndler C, Ortego J, Alonso V, Escudero P, Ramírez G, Petry C, Lasalvia L, Bohmann K, Wirtz R, Mira A, Castells A.

Int J Cancer. 2013 Mar 1;132(5):1090-7. doi: 10.1002/ijc.27747. Epub 2012 Aug 12.

11.

Decentral gene expression analysis for ER+/Her2- breast cancer: results of a proficiency testing program for the EndoPredict assay.

Denkert C, Kronenwett R, Schlake W, Bohmann K, Penzel R, Weber KE, Höfler H, Lehmann U, Schirmacher P, Specht K, Rudas M, Kreipe HH, Schraml P, Schlake G, Bago-Horvath Z, Tiecke F, Varga Z, Moch H, Schmidt M, Prinzler J, Kerjaschki D, Sinn BV, Müller BM, Filipits M, Petry C, Dietel M.

Virchows Arch. 2012 Mar;460(3):251-9. doi: 10.1007/s00428-012-1204-4. Epub 2012 Feb 28.

12.

Molecular diet analysis of two african free-tailed bats (molossidae) using high throughput sequencing.

Bohmann K, Monadjem A, Lehmkuhl Noer C, Rasmussen M, Zeale MR, Clare E, Jones G, Willerslev E, Gilbert MT.

PLoS One. 2011;6(6):e21441. doi: 10.1371/journal.pone.0021441. Epub 2011 Jun 22.

13.

Quantitative determination of estrogen receptor, progesterone receptor, and HER2 mRNA in formalin-fixed paraffin-embedded tissue--a new option for predictive biomarker assessment in breast cancer.

Müller BM, Kronenwett R, Hennig G, Euting H, Weber K, Bohmann K, Weichert W, Altmann G, Roth C, Winzer KJ, Kristiansen G, Petry C, Dietel M, Denkert C.

Diagn Mol Pathol. 2011 Mar;20(1):1-10. doi: 10.1097/PDM.0b013e3181e3630c.

PMID:
21326033
14.

A high-sensitivity, medium-density, and target amplification-free planar waveguide microarray system for gene expression analysis of formalin-fixed and paraffin-embedded tissue.

Schwers S, Reifenberger E, Gehrmann M, Izmailov A, Bohmann K.

Clin Chem. 2009 Nov;55(11):1995-2003. doi: 10.1373/clinchem.2009.128215. Epub 2009 Sep 10.

15.

RNA extraction from archival formalin-fixed paraffin-embedded tissue: a comparison of manual, semiautomated, and fully automated purification methods.

Bohmann K, Hennig G, Rogel U, Poremba C, Mueller BM, Fritz P, Stoerkel S, Schaefer KL.

Clin Chem. 2009 Sep;55(9):1719-27. doi: 10.1373/clinchem.2008.122572. Epub 2009 Jul 17.

16.

Topical mitogen-activated protein kinases inhibition reduces intimal hyperplasia in arterialized vein grafts.

Gulkarov I, Bohmann K, Cinnante KM, Pirelli L, Yu PJ, Grau JB, Pintucci G, Galloway AC, Mignatti P.

J Surg Res. 2009 Jun 1;154(1):150-6. doi: 10.1016/j.jss.2008.04.025. Epub 2008 May 9.

PMID:
18805551
17.

Mechanisms of c-reactive protein up-regulation in arterialized vein grafts.

Gulkarov I, Pintucci G, Bohmann K, Saunders PC, Sullivan RF, Ferrari G, Mignatti P, Galloway AC.

Surgery. 2006 Feb;139(2):254-62.

PMID:
16455335
18.

Anti-proliferative and anti-inflammatory effects of topical MAPK inhibition in arterialized vein grafts.

Pintucci G, Saunders PC, Gulkarov I, Sharony R, Kadian-Dodov DL, Bohmann K, Baumann FG, Galloway AC, Mignatti P.

FASEB J. 2006 Feb;20(2):398-400. Epub 2005 Nov 22.

PMID:
16303874
19.

The role of annuloplasty in mitral valve repair.

Schwartz CF, Gulkarov I, Bohmann K, Colvin SB, Galloway AC.

J Cardiovasc Surg (Torino). 2004 Oct;45(5):419-25. Review.

20.

The Drosophila SHC adaptor protein is required for signaling by a subset of receptor tyrosine kinases.

Luschnig S, Krauss J, Bohmann K, Desjeux I, Nüsslein-Volhard C.

Mol Cell. 2000 Feb;5(2):231-41.

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