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Items: 1 to 20 of 69

1.

Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments.

Daly P, van Munster JM, Blythe MJ, Ibbett R, Kokolski M, Gaddipati S, Lindquist E, Singan VR, Barry KW, Lipzen A, Ngan CY, Petzold CJ, Chan LJG, Pullan ST, Delmas S, Waldron PR, Grigoriev IV, Tucker GA, Simmons BA, Archer DB.

Biotechnol Biofuels. 2017 Feb 7;10:35. doi: 10.1186/s13068-017-0700-9. eCollection 2017.

2.

Metabolic activity in dormant conidia of Aspergillus niger and developmental changes during conidial outgrowth.

Novodvorska M, Stratford M, Blythe MJ, Wilson R, Beniston RG, Archer DB.

Fungal Genet Biol. 2016 Sep;94:23-31. doi: 10.1016/j.fgb.2016.07.002. Epub 2016 Jul 1.

3.

Transcriptomic responses of mixed cultures of ascomycete fungi to lignocellulose using dual RNA-seq reveal inter-species antagonism and limited beneficial effects on CAZyme expression.

Daly P, van Munster JM, Kokolski M, Sang F, Blythe MJ, Malla S, Velasco de Castro Oliveira J, Goldman GH, Archer DB.

Fungal Genet Biol. 2017 May;102:4-21. doi: 10.1016/j.fgb.2016.04.005. Epub 2016 May 2.

4.

An ultra-dense library resource for rapid deconvolution of mutations that cause phenotypes in Escherichia coli.

Nehring RB, Gu F, Lin HY, Gibson JL, Blythe MJ, Wilson R, Bravo Núñez MA, Hastings PJ, Louis EJ, Frisch RL, Hu JC, Rosenberg SM.

Nucleic Acids Res. 2016 Mar 18;44(5):e41. doi: 10.1093/nar/gkv1131. Epub 2015 Nov 17.

5.

RNA-sequencing reveals the complexities of the transcriptional response to lignocellulosic biofuel substrates in Aspergillus niger.

Pullan ST, Daly P, Delmas S, Ibbett R, Kokolski M, Neiteler A, van Munster JM, Wilson R, Blythe MJ, Gaddipati S, Tucker GA, Archer DB.

Fungal Biol Biotechnol. 2014 Nov 17;1(1):1-14. doi: 10.1186/s40694-014-0003-x.

6.

RNA-sequencing reveals the complexities of the transcriptional response to lignocellulosic biofuel substrates in Aspergillus niger.

Pullan ST, Daly P, Delmas S, Ibbett R, Kokolski M, Neiteler A, van Munster JM, Wilson R, Blythe MJ, Gaddipati S, Tucker GA, Archer DB.

Fungal Biol Biotechnol. 2014 Nov 17;1:3. doi: 10.1186/s40694-014-0003-x. eCollection 2014.

7.

The role of carbon starvation in the induction of enzymes that degrade plant-derived carbohydrates in Aspergillus niger.

van Munster JM, Daly P, Delmas S, Pullan ST, Blythe MJ, Malla S, Kokolski M, Noltorp ECM, Wennberg K, Fetherston R, Beniston R, Yu X, Dupree P, Archer DB.

Fungal Genet Biol. 2014 Nov;72:34-47. doi: 10.1016/j.fgb.2014.04.006. Epub 2014 Apr 29.

8.

Accelerated growth in the absence of DNA replication origins.

Hawkins M, Malla S, Blythe MJ, Nieduszynski CA, Allers T.

Nature. 2013 Nov 28;503(7477):544-547. doi: 10.1038/nature12650. Epub 2013 Nov 3.

9.

Condom Use by Adolescents.

COMMITTEE ON ADOLESCENCE.

Pediatrics. 2013 Nov;132(5):973-981. doi: 10.1542/peds.2013-2821.

10.

The dynamics of genome replication using deep sequencing.

Müller CA, Hawkins M, Retkute R, Malla S, Wilson R, Blythe MJ, Nakato R, Komata M, Shirahige K, de Moura AP, Nieduszynski CA.

Nucleic Acids Res. 2014 Jan;42(1):e3. doi: 10.1093/nar/gkt878. Epub 2013 Oct 1.

11.

Genome-wide transcriptional response of Trichoderma reesei to lignocellulose using RNA sequencing and comparison with Aspergillus niger.

Ries L, Pullan ST, Delmas S, Malla S, Blythe MJ, Archer DB.

BMC Genomics. 2013 Aug 9;14:541. doi: 10.1186/1471-2164-14-541.

12.

Transient exposure to low levels of insecticide affects metabolic networks of honeybee larvae.

Derecka K, Blythe MJ, Malla S, Genereux DP, Guffanti A, Pavan P, Moles A, Snart C, Ryder T, Ortori CA, Barrett DA, Schuster E, Stöger R.

PLoS One. 2013 Jul 2;8(7):e68191. doi: 10.1371/journal.pone.0068191. Print 2013.

13.

Trancriptional landscape of Aspergillus niger at breaking of conidial dormancy revealed by RNA-sequencing.

Novodvorska M, Hayer K, Pullan ST, Wilson R, Blythe MJ, Stam H, Stratford M, Archer DB.

BMC Genomics. 2013 Apr 11;14:246. doi: 10.1186/1471-2164-14-246.

14.

Standards for health information technology to ensure adolescent privacy.

Committee on Adolescence; Council on Clinical and Information Technology, Blythe MJ, Del Beccaro MA.

Pediatrics. 2012 Nov;130(5):987-90. doi: 10.1542/peds.2012-2580. Epub 2012 Oct 29.

PMID:
23109684
15.

Insurance status of urban detained adolescents.

Aalsma MC, Blythe MJ, Tong Y, Harezlak J, Rosenman MB.

J Correct Health Care. 2012 Oct;18(4):274-84. doi: 10.1177/1078345812455629. Epub 2012 Aug 23.

PMID:
22918659
16.

Uncovering the genome-wide transcriptional responses of the filamentous fungus Aspergillus niger to lignocellulose using RNA sequencing.

Delmas S, Pullan ST, Gaddipati S, Kokolski M, Malla S, Blythe MJ, Ibbett R, Campbell M, Liddell S, Aboobaker A, Tucker GA, Archer DB.

PLoS Genet. 2012;8(8):e1002875. doi: 10.1371/journal.pgen.1002875. Epub 2012 Aug 9.

17.

High through-put sequencing of the Parhyale hawaiensis mRNAs and microRNAs to aid comparative developmental studies.

Blythe MJ, Malla S, Everall R, Shih YH, Lemay V, Moreton J, Wilson R, Aboobaker AA.

PLoS One. 2012;7(3):e33784. doi: 10.1371/journal.pone.0033784. Epub 2012 Mar 20.

18.

The consequences of juvenile detention reform for mental health and sexually transmitted infection screening among detained youth.

Aalsma MC, Gudonis LC, Jarjoura GR, Blythe MJ, Tong Y, Harezlak J, Rosenman MB.

J Adolesc Health. 2012 Apr;50(4):365-70. doi: 10.1016/j.jadohealth.2011.08.013. Epub 2011 Oct 26.

PMID:
22443840
19.

Health care for youth in the juvenile justice system.

Committee on Adolescence.

Pediatrics. 2011 Dec;128(6):1219-35. doi: 10.1542/peds.2011-1757. Epub 2011 Nov 28. Erratum in: Pediatrics. 2012 Mar;129(3):595.

PMID:
22123883
20.

Male adolescent sexual and reproductive health care.

Marcell AV, Wibbelsman C, Seigel WM; Committee on Adolescence.

Pediatrics. 2011 Dec;128(6):e1658-76. doi: 10.1542/peds.2011-2384. Epub 2011 Nov 28.

PMID:
22123881

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