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Items: 1 to 20 of 51

1.

An Immune Atlas of Clear Cell Renal Cell Carcinoma.

Chevrier S, Levine JH, Zanotelli VRT, Silina K, Schulz D, Bacac M, Ries CH, Ailles L, Jewett MAS, Moch H, van den Broek M, Beisel C, Stadler MB, Gedye C, Reis B, Pe'er D, Bodenmiller B.

Cell. 2017 May 4;169(4):736-749.e18. doi: 10.1016/j.cell.2017.04.016.

2.

Detailed simulation of cancer exome sequencing data reveals differences and common limitations of variant callers.

Hofmann AL, Behr J, Singer J, Kuipers J, Beisel C, Schraml P, Moch H, Beerenwinkel N.

BMC Bioinformatics. 2017 Jan 3;18(1):8. doi: 10.1186/s12859-016-1417-7.

3.

Profiling of adhesive-related genes in the freshwater cnidarian Hydra magnipapillata by transcriptomics and proteomics.

Rodrigues M, Ostermann T, Kremeser L, Lindner H, Beisel C, Berezikov E, Hobmayer B, Ladurner P.

Biofouling. 2016 Oct;32(9):1115-1129.

4.

The CRISPR RNA-guided surveillance complex in Escherichia coli accommodates extended RNA spacers.

Luo ML, Jackson RN, Denny SR, Tokmina-Lukaszewska M, Maksimchuk KR, Lin W, Bothner B, Wiedenheft B, Beisel CL.

Nucleic Acids Res. 2016 Sep 6;44(15):7385-94. doi: 10.1093/nar/gkw421. Epub 2016 May 12.

5.

Identifying and Visualizing Functional PAM Diversity across CRISPR-Cas Systems.

Leenay RT, Maksimchuk KR, Slotkowski RA, Agrawal RN, Gomaa AA, Briner AE, Barrangou R, Beisel CL.

Mol Cell. 2016 Apr 7;62(1):137-47. doi: 10.1016/j.molcel.2016.02.031. Epub 2016 Mar 31.

6.

Rethinking the Hierarchy of Sugar Utilization in Bacteria.

Beisel CL, Afroz T.

J Bacteriol. 2015 Nov 16;198(3):374-6. doi: 10.1128/JB.00890-15.

7.

Sex Differences in Plasmacytoid Dendritic Cell Levels of IRF5 Drive Higher IFN-α Production in Women.

Griesbeck M, Ziegler S, Laffont S, Smith N, Chauveau L, Tomezsko P, Sharei A, Kourjian G, Porichis F, Hart M, Palmer CD, Sirignano M, Beisel C, Hildebrandt H, Cénac C, Villani AC, Diefenbach TJ, Le Gall S, Schwartz O, Herbeuval JP, Autran B, Guéry JC, Chang JJ, Altfeld M.

J Immunol. 2015 Dec 1;195(11):5327-36. doi: 10.4049/jimmunol.1501684. Epub 2015 Oct 30.

8.

Current and future prospects for CRISPR-based tools in bacteria.

Luo ML, Leenay RT, Beisel CL.

Biotechnol Bioeng. 2016 May;113(5):930-43. doi: 10.1002/bit.25851. Epub 2015 Oct 27. Review.

9.

Impact of Residual Inducer on Titratable Expression Systems.

Afroz T, Luo ML, Beisel CL.

PLoS One. 2015 Sep 8;10(9):e0137421. doi: 10.1371/journal.pone.0137421. eCollection 2015.

10.

Self-assembled DNA nanoclews for the efficient delivery of CRISPR-Cas9 for genome editing.

Sun W, Ji W, Hall JM, Hu Q, Wang C, Beisel CL, Gu Z.

Angew Chem Int Ed Engl. 2015 Oct 5;54(41):12029-33. doi: 10.1002/anie.201506030. Epub 2015 Aug 27.

11.

Positional RNA-Seq identifies candidate genes for phenotypic engineering of sexual traits.

Arbore R, Sekii K, Beisel C, Ladurner P, Berezikov E, Schärer L.

Front Zool. 2015 Jul 3;12:14. doi: 10.1186/s12983-015-0106-0. eCollection 2015.

12.

High-resolution profiling of Drosophila replication start sites reveals a DNA shape and chromatin signature of metazoan origins.

Comoglio F, Schlumpf T, Schmid V, Rohs R, Beisel C, Paro R.

Cell Rep. 2015 May 5;11(5):821-34. doi: 10.1016/j.celrep.2015.03.070. Epub 2015 Apr 23.

13.

HAND2 targets define a network of transcriptional regulators that compartmentalize the early limb bud mesenchyme.

Osterwalder M, Speziale D, Shoukry M, Mohan R, Ivanek R, Kohler M, Beisel C, Wen X, Scales SJ, Christoffels VM, Visel A, Lopez-Rios J, Zeller R.

Dev Cell. 2014 Nov 10;31(3):345-57. doi: 10.1016/j.devcel.2014.09.018. Epub 2014 Nov 10.

14.

An SNP-based second-generation genetic map of Daphnia magna and its application to QTL analysis of phenotypic traits.

Routtu J, Hall MD, Albere B, Beisel C, Bergeron RD, Chaturvedi A, Choi JH, Colbourne J, De Meester L, Stephens MT, Stelzer CP, Solorzano E, Thomas WK, Pfrender ME, Ebert D.

BMC Genomics. 2014 Nov 27;15:1033. doi: 10.1186/1471-2164-15-1033.

15.

A CRISPR design for next-generation antimicrobials.

Beisel CL, Gomaa AA, Barrangou R.

Genome Biol. 2014 Nov 8;15(11):516. doi: 10.1186/s13059-014-0516-x.

16.

Repurposing endogenous type I CRISPR-Cas systems for programmable gene repression.

Luo ML, Mullis AS, Leenay RT, Beisel CL.

Nucleic Acids Res. 2015 Jan;43(1):674-81. doi: 10.1093/nar/gku971. Epub 2014 Oct 17.

17.

Association of autoimmune hepatitis and systemic lupus erythematodes: a case series and review of the literature.

Beisel C, Weiler-Normann C, Teufel A, Lohse AW.

World J Gastroenterol. 2014 Sep 21;20(35):12662-7. doi: 10.3748/wjg.v20.i35.12662. Review.

18.

German cohort of HCV mono-infected and HCV/HIV co-infected patients reveals relative under-treatment of co-infected patients.

Beisel C, Heuer M, Otto B, Jochum J, Schmiedel S, Hertling S, Degen O, Lüth S, van Lunzen J, Schulze Zur Wiesch J.

AIDS Res Ther. 2014 Jul 1;11:16. doi: 10.1186/1742-6405-11-16. eCollection 2014.

19.

Bacterial sugar utilization gives rise to distinct single-cell behaviours.

Afroz T, Biliouris K, Kaznessis Y, Beisel CL.

Mol Microbiol. 2014 Sep;93(6):1093-1103. doi: 10.1111/mmi.12695. Epub 2014 Jul 16.

20.

Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations.

Giallonardo FD, Töpfer A, Rey M, Prabhakaran S, Duport Y, Leemann C, Schmutz S, Campbell NK, Joos B, Lecca MR, Patrignani A, Däumer M, Beisel C, Rusert P, Trkola A, Günthard HF, Roth V, Beerenwinkel N, Metzner KJ.

Nucleic Acids Res. 2014 Aug;42(14):e115. doi: 10.1093/nar/gku537. Epub 2014 Jun 27.

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