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Items: 6

1.

Linear models of activation cascades: analytical solutions and coarse-graining of delayed signal transduction.

Beguerisse-Díaz M, Desikan R, Barahona M.

J R Soc Interface. 2016 Aug;13(121). pii: 20160409. doi: 10.1098/rsif.2016.0409. Epub 2016 Aug 31.

2.

Flow-Based Network Analysis of the Caenorhabditis elegans Connectome.

Bacik KA, Schaub MT, Beguerisse-Díaz M, Billeh YN, Barahona M.

PLoS Comput Biol. 2016 Aug 5;12(8):e1005055. doi: 10.1371/journal.pcbi.1005055. eCollection 2016 Aug.

3.

Interest communities and flow roles in directed networks: the Twitter network of the UK riots.

Beguerisse-Díaz M, Garduño-Hernández G, Vangelov B, Yaliraki SN, Barahona M.

J R Soc Interface. 2014 Dec 6;11(101):20140940. doi: 10.1098/rsif.2014.0940.

4.

Compound stress response in stomatal closure: a mathematical model of ABA and ethylene interaction in guard cells.

Beguerisse-Dıaz M, Hernández-Gómez MC, Lizzul AM, Barahona M, Desikan R.

BMC Syst Biol. 2012 Nov 25;6:146. doi: 10.1186/1752-0509-6-146.

5.

Mathematical modeling reveals the functional implications of the different nuclear shuttling rates of Erk1 and Erk2.

Harrington HA, Komorowski M, Beguerisse-Díaz M, Ratto GM, Stumpf MP.

Phys Biol. 2012 Jun;9(3):036001. doi: 10.1088/1478-3975/9/3/036001. Epub 2012 May 3.

PMID:
22551942
6.

Squeeze-and-breathe evolutionary Monte Carlo optimization with local search acceleration and its application to parameter fitting.

Beguerisse-Díaz M, Wang B, Desikan R, Barahona M.

J R Soc Interface. 2012 Aug 7;9(73):1925-33. doi: 10.1098/rsif.2011.0767. Epub 2012 Jan 19.

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