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Items: 9


Coding and noncoding landscape of extracellular RNA released by human glioma stem cells.

Wei Z, Batagov AO, Schinelli S, Wang J, Wang Y, El Fatimy R, Rabinovsky R, Balaj L, Chen CC, Hochberg F, Carter B, Breakefield XO, Krichevsky AM.

Nat Commun. 2017 Oct 26;8(1):1145. doi: 10.1038/s41467-017-01196-x.


A novel community driven software for functional enrichment analysis of extracellular vesicles data.

Pathan M, Keerthikumar S, Chisanga D, Alessandro R, Ang CS, Askenase P, Batagov AO, Benito-Martin A, Camussi G, Clayton A, Collino F, Di Vizio D, Falcon-Perez JM, Fonseca P, Fonseka P, Fontana S, Gho YS, Hendrix A, Hoen EN, Iraci N, Kastaniegaard K, Kislinger T, Kowal J, Kurochkin IV, Leonardi T, Liang Y, Llorente A, Lunavat TR, Maji S, Monteleone F, Øverbye A, Panaretakis T, Patel T, Peinado H, Pluchino S, Principe S, Ronquist G, Royo F, Sahoo S, Spinelli C, Stensballe A, Théry C, van Herwijnen MJC, Wauben M, Welton JL, Zhao K, Mathivanan S.

J Extracell Vesicles. 2017 May 26;6(1):1321455. doi: 10.1080/20013078.2017.1321455. eCollection 2017.


Genome-wide analysis of mRNAs associated with mouse peroxisomes.

Yarmishyn AA, Kremenskoy M, Batagov AO, Preuss A, Wong JH, Kurochkin IV.

BMC Genomics. 2016 Dec 22;17(Suppl 13):1028. doi: 10.1186/s12864-016-3330-x.


Fetal Bovine Serum RNA Interferes with the Cell Culture derived Extracellular RNA.

Wei Z, Batagov AO, Carter DR, Krichevsky AM.

Sci Rep. 2016 Aug 9;6:31175. doi: 10.1038/srep31175.


HOXD-AS1 is a novel lncRNA encoded in HOXD cluster and a marker of neuroblastoma progression revealed via integrative analysis of noncoding transcriptome.

Yarmishyn AA, Batagov AO, Tan JZ, Sundaram GM, Sampath P, Kuznetsov VA, Kurochkin IV.

BMC Genomics. 2014;15 Suppl 9:S7. doi: 10.1186/1471-2164-15-S9-S7. Epub 2014 Dec 8.


Role of genomic architecture in the expression dynamics of long noncoding RNAs during differentiation of human neuroblastoma cells.

Batagov AO, Yarmishyn AA, Jenjaroenpun P, Tan JZ, Nishida Y, Kurochkin IV.

BMC Syst Biol. 2013 Oct 16;7 Suppl 3:S11. doi: 10.1186/1752-0509-7-S3-S11.


Exosomes secreted by human cells transport largely mRNA fragments that are enriched in the 3'-untranslated regions.

Batagov AO, Kurochkin IV.

Biol Direct. 2013 Jun 7;8:12. doi: 10.1186/1745-6150-8-12.


Identification of nucleotide patterns enriched in secreted RNAs as putative cis-acting elements targeting them to exosome nano-vesicles.

Batagov AO, Kuznetsov VA, Kurochkin IV.

BMC Genomics. 2011 Nov 30;12 Suppl 3:S18. doi: 10.1186/1471-2164-12-S3-S18. Epub 2011 Nov 30.


The Sym35 gene required for root nodule development in pea is an ortholog of Nin from Lotus japonicus.

Borisov AY, Madsen LH, Tsyganov VE, Umehara Y, Voroshilova VA, Batagov AO, Sandal N, Mortensen A, Schauser L, Ellis N, Tikhonovich IA, Stougaard J.

Plant Physiol. 2003 Mar;131(3):1009-17.

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