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Items: 6


A large and diverse collection of bovine genome sequences from the Canadian Cattle Genome Project.

Stothard P, Liao X, Arantes AS, De Pauw M, Coros C, Plastow GS, Sargolzaei M, Crowley JJ, Basarab JA, Schenkel F, Moore S, Miller SP.

Gigascience. 2015 Oct 26;4:49. doi: 10.1186/s13742-015-0090-5. eCollection 2015.


Genome-wide whole blood microRNAome and transcriptome analyses reveal miRNA-mRNA regulated host response to foodborne pathogen Salmonella infection in swine.

Bao H, Kommadath A, Liang G, Sun X, Arantes AS, Tuggle CK, Bearson SM, Plastow GS, Stothard P, Guan le L.

Sci Rep. 2015 Jul 31;5:12620. doi: 10.1038/srep12620.


Gene co-expression network analysis identifies porcine genes associated with variation in Salmonella shedding.

Kommadath A, Bao H, Arantes AS, Plastow GS, Tuggle CK, Bearson SM, Guan le L, Stothard P.

BMC Genomics. 2014 Jun 9;15:452. doi: 10.1186/1471-2164-15-452.


Expansion of ruminant-specific microRNAs shapes target gene expression divergence between ruminant and non-ruminant species.

Bao H, Kommadath A, Sun X, Meng Y, Arantes AS, Plastow GS, Guan LL, Stothard P.

BMC Genomics. 2013 Sep 10;14:609. doi: 10.1186/1471-2164-14-609.


Comparing thousands of circular genomes using the CGView Comparison Tool.

Grant JR, Arantes AS, Stothard P.

BMC Genomics. 2012 May 23;13:202. doi: 10.1186/1471-2164-13-202.


In-depth annotation of SNPs arising from resequencing projects using NGS-SNP.

Grant JR, Arantes AS, Liao X, Stothard P.

Bioinformatics. 2011 Aug 15;27(16):2300-1. doi: 10.1093/bioinformatics/btr372. Epub 2011 Jun 22.

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