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Items: 1 to 20 of 38

1.

Patient-Specific Bacteroides Genome Variants in Pouchitis.

Vineis JH, Ringus DL, Morrison HG, Delmont TO, Dalal S, Raffals LH, Antonopoulos DA, Rubin DT, Eren AM, Chang EB, Sogin ML.

MBio. 2016 Nov 15;7(6). pii: e01713-16. doi: 10.1128/mBio.01713-16.

2.

Genetic deletion of the bacterial sensor NOD2 improves murine Crohn's disease-like ileitis independent of functional dysbiosis.

Corridoni D, Rodriguez-Palacios A, Di Stefano G, Di Martino L, Antonopoulos DA, Chang EB, Arseneau KO, Pizarro TT, Cominelli F.

Mucosal Immunol. 2016 Nov 16. doi: 10.1038/mi.2016.98. [Epub ahead of print]

PMID:
27848951
3.

Interleukin-15 promotes intestinal dysbiosis with butyrate deficiency associated with increased susceptibility to colitis.

Meisel M, Mayassi T, Fehlner-Peach H, Koval JC, O'Brien SL, Hinterleitner R, Lesko K, Kim S, Bouziat R, Chen L, Weber CR, Mazmanian SK, Jabri B, Antonopoulos DA.

ISME J. 2017 Jan;11(1):15-30. doi: 10.1038/ismej.2016.114.

PMID:
27648810
4.

Transplanting a Microbial Organ: the Good, the Bad, and the Unknown.

Antonopoulos DA, Chang EB.

MBio. 2016 May 3;7(3). pii: e00572-16. doi: 10.1128/mBio.00572-16.

5.

Insights into the pathogenesis of ulcerative colitis from a murine model of stasis-induced dysbiosis, colonic metaplasia, and genetic susceptibility.

Ward MA, Pierre JF, Leal RF, Huang Y, Shogan B, Dalal SR, Weber CR, Leone VA, Musch MW, An GC, Rao MC, Rubin DT, Raffals LE, Antonopoulos DA, Sogin ML, Hyman NH, Alverdy JC, Chang EB.

Am J Physiol Gastrointest Liver Physiol. 2016 Jun 1;310(11):G973-88. doi: 10.1152/ajpgi.00017.2016.

PMID:
27079612
6.

Spatial scale drives patterns in soil bacterial diversity.

O'Brien SL, Gibbons SM, Owens SM, Hampton-Marcell J, Johnston ER, Jastrow JD, Gilbert JA, Meyer F, Antonopoulos DA.

Environ Microbiol. 2016 Jun;18(6):2039-51. doi: 10.1111/1462-2920.13231.

PMID:
26914164
7.

Impact of Organic Carbon Electron Donors on Microbial Community Development under Iron- and Sulfate-Reducing Conditions.

Kwon MJ, O'Loughlin EJ, Boyanov MI, Brulc JM, Johnston ER, Kemner KM, Antonopoulos DA.

PLoS One. 2016 Jan 22;11(1):e0146689. doi: 10.1371/journal.pone.0146689.

8.

Genetic and Metabolic Signals during Acute Enteric Bacterial Infection Alter the Microbiota and Drive Progression to Chronic Inflammatory Disease.

Kamdar K, Khakpour S, Chen J, Leone V, Brulc J, Mangatu T, Antonopoulos DA, Chang EB, Kahn SA, Kirschner BS, Young G, DePaolo RW.

Cell Host Microbe. 2016 Jan 13;19(1):21-31. doi: 10.1016/j.chom.2015.12.006.

9.

Innate and Adaptive Humoral Responses Coat Distinct Commensal Bacteria with Immunoglobulin A.

Bunker JJ, Flynn TM, Koval JC, Shaw DG, Meisel M, McDonald BD, Ishizuka IE, Dent AL, Wilson PC, Jabri B, Antonopoulos DA, Bendelac A.

Immunity. 2015 Sep 15;43(3):541-53. doi: 10.1016/j.immuni.2015.08.007.

10.

Commensal bacteria protect against food allergen sensitization.

Stefka AT, Feehley T, Tripathi P, Qiu J, McCoy K, Mazmanian SK, Tjota MY, Seo GY, Cao S, Theriault BR, Antonopoulos DA, Zhou L, Chang EB, Fu YX, Nagler CR.

Proc Natl Acad Sci U S A. 2014 Sep 9;111(36):13145-50. doi: 10.1073/pnas.1412008111.

11.

Exercise prevents weight gain and alters the gut microbiota in a mouse model of high fat diet-induced obesity.

Evans CC, LePard KJ, Kwak JW, Stancukas MC, Laskowski S, Dougherty J, Moulton L, Glawe A, Wang Y, Leone V, Antonopoulos DA, Smith D, Chang EB, Ciancio MJ.

PLoS One. 2014 Mar 26;9(3):e92193. doi: 10.1371/journal.pone.0092193.

12.

Comparison of brush and biopsy sampling methods of the ileal pouch for assessment of mucosa-associated microbiota of human subjects.

Huse SM, Young VB, Morrison HG, Antonopoulos DA, Kwon J, Dalal S, Arrieta R, Hubert NA, Shen L, Vineis JH, Koval JC, Sogin ML, Chang EB, Raffals LE.

Microbiome. 2014 Feb 14;2(1):5. doi: 10.1186/2049-2618-2-5.

13.

Multiphasic analysis of the temporal development of the distal gut microbiota in patients following ileal pouch anal anastomosis.

Young VB, Raffals LH, Huse SM, Vital M, Dai D, Schloss PD, Brulc JM, Antonopoulos DA, Arrieta RL, Kwon JH, Reddy KG, Hubert NA, Grim SL, Vineis JH, Dalal S, Morrison HG, Eren AM, Meyer F, Schmidt TM, Tiedje JM, Chang EB, Sogin ML.

Microbiome. 2013 Mar 4;1(1):9. doi: 10.1186/2049-2618-1-9.

14.

A gene-targeted approach to investigate the intestinal butyrate-producing bacterial community.

Vital M, Penton CR, Wang Q, Young VB, Antonopoulos DA, Sogin ML, Morrison HG, Raffals L, Chang EB, Huffnagle GB, Schmidt TM, Cole JR, Tiedje JM.

Microbiome. 2013 Mar 4;1(1):8. doi: 10.1186/2049-2618-1-8.

15.

Bacterial community structure and functional contributions to emergence of health or necrotizing enterocolitis in preterm infants.

Claud EC, Keegan KP, Brulc JM, Lu L, Bartels D, Glass E, Chang EB, Meyer F, Antonopoulos DA.

Microbiome. 2013 Jul 10;1(1):20. doi: 10.1186/2049-2618-1-20.

16.

Dietary-fat-induced taurocholic acid promotes pathobiont expansion and colitis in Il10-/- mice.

Devkota S, Wang Y, Musch MW, Leone V, Fehlner-Peach H, Nadimpalli A, Antonopoulos DA, Jabri B, Chang EB.

Nature. 2012 Jul 5;487(7405):104-8. doi: 10.1038/nature11225.

17.

Meeting report: the 2 annual argonne soils workshop, argonne national laboratory, chicago illinois, USA, october 6-8, 2010.

O'Brien SL, Glass EM, Brulc JM, Gilbert JA, Antonopoulos DA, Meyer F.

Stand Genomic Sci. 2011 Nov 30;5(2):198-202. doi: 10.4056/sigs.1874546.

18.

Geochemical and microbiological processes contributing to the transformation of hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) in contaminated aquifer material.

Kwon MJ, O'Loughlin EJ, Antonopoulos DA, Finneran KT.

Chemosphere. 2011 Aug;84(9):1223-30. doi: 10.1016/j.chemosphere.2011.05.027.

PMID:
21664641
19.

BMP signaling components in embryonic transcriptomes of the hover fly Episyrphus balteatus (Syrphidae).

Lemke S, Antonopoulos DA, Meyer F, Domanus MH, Schmidt-Ott U.

BMC Genomics. 2011 May 31;12:278. doi: 10.1186/1471-2164-12-278.

20.

Diversity of bacteria at healthy human conjunctiva.

Dong Q, Brulc JM, Iovieno A, Bates B, Garoutte A, Miller D, Revanna KV, Gao X, Antonopoulos DA, Slepak VZ, Shestopalov VI.

Invest Ophthalmol Vis Sci. 2011 Jul 20;52(8):5408-13. doi: 10.1167/iovs.10-6939.

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