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Items: 1 to 20 of 29

1.

In Silico Computational Transcriptomics Reveals Novel Endocrine Disruptors in Largemouth Bass ( Micropterus salmoides).

Basili D, Zhang JL, Herbert J, Kroll K, Denslow ND, Martyniuk CJ, Falciani F, Antczak P.

Environ Sci Technol. 2018 Jun 15. doi: 10.1021/acs.est.8b02805. [Epub ahead of print]

PMID:
29878769
2.

Incorporating sub-organismal processes into dynamic energy budget models for ecological risk assessment.

Murphy CA, Nisbet RM, Antczak P, Garcia-Reyero N, Gergs A, Lika K, Mathews T, Muller EB, Nacci D, Peace A, Remien CH, Schultz IR, Stevenson LM, Watanabe KH.

Integr Environ Assess Manag. 2018 Jun 5. doi: 10.1002/ieam.4063. [Epub ahead of print]

PMID:
29870141
3.

Variation in faecal microbiota in a group of horses managed at pasture over a 12-month period.

Salem SE, Maddox TW, Berg A, Antczak P, Ketley JM, Williams NJ, Archer DC.

Sci Rep. 2018 May 31;8(1):8510. doi: 10.1038/s41598-018-26930-3.

4.

The Satellite Cell Niche Regulates the Balance between Myoblast Differentiation and Self-Renewal via p53.

Flamini V, Ghadiali RS, Antczak P, Rothwell A, Turnbull JE, Pisconti A.

Stem Cell Reports. 2018 Mar 13;10(3):970-983. doi: 10.1016/j.stemcr.2018.01.007. Epub 2018 Feb 8.

5.

How consistent are we? Interlaboratory comparison study in fathead minnows using the model estrogen 17α-ethinylestradiol to develop recommendations for environmental transcriptomics.

Feswick A, Isaacs M, Biales A, Flick RW, Bencic DC, Wang RL, Vulpe C, Brown-Augustine M, Loguinov A, Falciani F, Antczak P, Herbert J, Brown L, Denslow ND, Kroll KJ, Lavelle C, Dang V, Escalon L, Garcia-Reyero N, Martyniuk CJ, Munkittrick KR.

Environ Toxicol Chem. 2017 Oct;36(10):2614-2623. doi: 10.1002/etc.3799. Epub 2017 Apr 19.

PMID:
28316117
6.

A Network Biology Approach Identifies Molecular Cross-Talk between Normal Prostate Epithelial and Prostate Carcinoma Cells.

Trevino V, Cassese A, Nagy Z, Zhuang X, Herbert J, Antczak P, Clarke K, Davies N, Rahman A, Campbell MJ, Guindani M, Bicknell R, Vannucci M, Falciani F.

PLoS Comput Biol. 2016 Apr 28;12(4):e1004884. doi: 10.1371/journal.pcbi.1004884. eCollection 2016 Apr. Erratum in: PLoS Comput Biol. 2016 Oct 17;12 (10 ):e1005172. Antzack P [corrected to Antczak P].

7.

Adverse Outcome Pathways for Regulatory Applications: Examination of Four Case Studies With Different Degrees of Completeness and Scientific Confidence.

Perkins EJ, Antczak P, Burgoon L, Falciani F, Garcia-Reyero N, Gutsell S, Hodges G, Kienzler A, Knapen D, McBride M, Willett C.

Toxicol Sci. 2015 Nov;148(1):14-25. doi: 10.1093/toxsci/kfv181. Review.

PMID:
26500288
8.

Systems Biology Approach Reveals a Calcium-Dependent Mechanism for Basal Toxicity in Daphnia magna.

Antczak P, White TA, Giri A, Michelangeli F, Viant MR, Cronin MT, Vulpe C, Falciani F.

Environ Sci Technol. 2015 Sep 15;49(18):11132-40. doi: 10.1021/acs.est.5b02707. Epub 2015 Aug 24.

PMID:
26244374
9.

Gene transcription, metabolite and lipid profiling in eco-indicator daphnia magna indicate diverse mechanisms of toxicity by legacy and emerging flame-retardants.

Scanlan LD, Loguinov AV, Teng Q, Antczak P, Dailey KP, Nowinski DT, Kornbluh J, Lin XX, Lachenauer E, Arai A, Douglas NK, Falciani F, Stapleton HM, Vulpe CD.

Environ Sci Technol. 2015 Jun 16;49(12):7400-10. doi: 10.1021/acs.est.5b00977. Epub 2015 Jun 1.

10.

Stromal transcriptional profiles reveal hierarchies of anatomical site, serum response and disease and identify disease specific pathways.

Filer A, Antczak P, Parsonage GN, Legault HM, O'Toole M, Pearson MJ, Thomas AM, Scheel-Toellner D, Raza K, Buckley CD, Falciani F.

PLoS One. 2015 Mar 25;10(3):e0120917. doi: 10.1371/journal.pone.0120917. eCollection 2015.

11.

A Bayesian model for the identification of differentially expressed genes in Daphnia magna exposed to munition pollutants.

Cassese A, Guindani M, Antczak P, Falciani F, Vannucci M.

Biometrics. 2015 Sep;71(3):803-11. doi: 10.1111/biom.12303. Epub 2015 Mar 13.

12.

Future water quality monitoring--adapting tools to deal with mixtures of pollutants in water resource management.

Altenburger R, Ait-Aissa S, Antczak P, Backhaus T, Barceló D, Seiler TB, Brion F, Busch W, Chipman K, de Alda ML, de Aragão Umbuzeiro G, Escher BI, Falciani F, Faust M, Focks A, Hilscherova K, Hollender J, Hollert H, Jäger F, Jahnke A, Kortenkamp A, Krauss M, Lemkine GF, Munthe J, Neumann S, Schymanski EL, Scrimshaw M, Segner H, Slobodnik J, Smedes F, Kughathas S, Teodorovic I, Tindall AJ, Tollefsen KE, Walz KH, Williams TD, Van den Brink PJ, van Gils J, Vrana B, Zhang X, Brack W.

Sci Total Environ. 2015 Apr 15;512-513:540-551. doi: 10.1016/j.scitotenv.2014.12.057. Epub 2015 Jan 31.

PMID:
25644849
13.

The COPD Knowledge Base: enabling data analysis and computational simulation in translational COPD research.

Cano I, Tényi Á, Schueller C, Wolff M, Huertas Migueláñez MM, Gomez-Cabrero D, Antczak P, Roca J, Cascante M, Falciani F, Maier D.

J Transl Med. 2014 Nov 28;12 Suppl 2:S6. doi: 10.1186/1479-5876-12-S2-S6. Epub 2014 Nov 28.

14.

A systems biology approach reveals a link between systemic cytokines and skeletal muscle energy metabolism in a rodent smoking model and human COPD.

Davidsen PK, Herbert JM, Antczak P, Clarke K, Ferrer E, Peinado VI, Gonzalez C, Roca J, Egginton S, Barberá JA, Falciani F.

Genome Med. 2014 Aug 9;6(8):59. doi: 10.1186/s13073-014-0059-5. eCollection 2014.

15.

Silver nanowire exposure results in internalization and toxicity to Daphnia magna.

Scanlan LD, Reed RB, Loguinov AV, Antczak P, Tagmount A, Aloni S, Nowinski DT, Luong P, Tran C, Karunaratne N, Pham D, Lin XX, Falciani F, Higgins CP, Ranville JF, Vulpe CD, Gilbert B.

ACS Nano. 2013 Dec 23;7(12):10681-94. doi: 10.1021/nn4034103. Epub 2013 Dec 5.

16.

Molecular toxicity identification evaluation (mTIE) approach predicts chemical exposure in Daphnia magna.

Antczak P, Jo HJ, Woo S, Scanlan L, Poynton H, Loguinov A, Chan S, Falciani F, Vulpe C.

Environ Sci Technol. 2013 Oct 15;47(20):11747-56. doi: 10.1021/es402819c. Epub 2013 Oct 7.

PMID:
23875995
17.

Gene expression networks underlying ovarian development in wild largemouth bass (Micropterus salmoides).

Martyniuk CJ, Prucha MS, Doperalski NJ, Antczak P, Kroll KJ, Falciani F, Barber DS, Denslow ND.

PLoS One. 2013;8(3):e59093. doi: 10.1371/journal.pone.0059093. Epub 2013 Mar 20.

18.

The experimental renal cell carcinoma model in the chick embryo.

Fergelot P, Bernhard JC, Soulet F, Kilarski WW, Léon C, Courtois N, Deminière C, Herbert JM, Antczak P, Falciani F, Rioux-Leclercq N, Patard JJ, Ferrière JM, Ravaud A, Hagedorn M, Bikfalvi A.

Angiogenesis. 2013 Jan;16(1):181-94. doi: 10.1007/s10456-012-9311-z. Epub 2012 Oct 18.

PMID:
23076651
19.

Identification and pathway mapping of furan target proteins reveal mitochondrial energy production and redox regulation as critical targets of furan toxicity.

Moro S, Chipman JK, Antczak P, Turan N, Dekant W, Falciani F, Mally A.

Toxicol Sci. 2012 Apr;126(2):336-52. doi: 10.1093/toxsci/kfs005. Epub 2012 Jan 12.

PMID:
22240984
20.

Relative overexpression of X-linked genes in mouse embryonic stem cells is consistent with Ohno's hypothesis.

Lin H, Halsall JA, Antczak P, O'Neill LP, Falciani F, Turner BM.

Nat Genet. 2011 Nov 28;43(12):1169-70; author reply 1171-2. doi: 10.1038/ng.992. No abstract available.

PMID:
22120049

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