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Nucleic Acids Res. 2016 Jan 4;44(D1):D27-37. doi: 10.1093/nar/gkv1310. Epub 2015 Nov 28.

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases.

Collaborators (679)

Bultet LA, Aguilar-Rodríguez J, Ahrens CH, Ahrné EL, Ai N, Aimo L, Akalin A, Aleksiev T, Alocci D, Altenhoff A, Alves I, Ambrosini G, Pedone PA, Angelino P, Anisimova M, Appel R, Argoud-Puy G, Arnold K, Arpat B, Artimo P, Ascencao K, Auchincloss A, Axelsen K, Gerritsen VB, Bairoch A, Bansal P, Baratin D, Barbato A, Barbié V, Barras D, Barreiro M, Barret S, Bastian F, Neto TM, Baudis M, Beaudoing E, Beckmann JS, Bekkar AK, Cammoun LB, Benmohammed S, Bernard M, Bertelli C, Bertoni M, Bienert S, Bignucolo O, Bilbao A, Bilican A, Blank D, Blatter MC, Blum L, Bocquet J, Boeckmann B, Bolleman JT, Bordoli L, Bosshard L, Bouchet G, Bougueleret L, Boutet E, Bovigny C, Bratulic S, Breuza L, Bridge AJ, Britan A, Brito F, Frazão JB, Bruggmann R, Bucher P, Burdet F, Burger L, Cabello EM, Gomez RM, Calderon S, Cannarozzi G, Carl S, Casas CC, Catherinet S, Périer RC, Charpilloz C, Chaskar PD, Chen W, Pepe AC, Chopard B, Chu HY, Civic N, Claassen M, Clottu S, Colombo M, Cosandier I, Coudert E, Crespo I, Creus M, Cuche B, Cuendet MA, Cusin I, Daga N, Daina A, Dauvillier J, David F, Davydov I, Manadelo Ferreira Mde S, de Beer T, de Castro E, de Santana C, Delafontaine J, Delorenzi M, Delucinge-Vivier C, Demirel Ö, Derham R, Dermitzakis EM, Dib L, Diene S, Dilek N, Dilmi J, Domagalski MJ, Dorier J, Dornevil D, Dousse A, Dreos R, Duchen P, Roggli PD, Duperret ID, Durinx C, Duvaud S, Engler R, Erkek S, López PE, Estreicher A, Excoffier L, Fabbretti R, Falcone JL, Falquet L, Famiglietti ML, Ferreira AM, Feuermann M, Filliettaz M, Flegel V, Foucal A, Franceschini A, Fucile G, Gaidatzis D, Garcia V, Gasteiger E, Gateau A, Gatti L, Gaudet P, Gaudinat A, Gehant S, Gfeller D, Gharib WH, Ghraichy M, Gidoin C, Gil M, Gleizes A, Gobeill J, Gonnet G, Gos A, Gotz L, Gouy A, Grbic D, Groux R, Gruaz-Gumowski N, Grun D, Gschwind A, Guex N, Gupta S, Gétaz M, Haake D, Haas J, Hatzimanikatis V, Heckel G, Gardiol DF, Hinard V, Hinz U, Homicsko K, Horlacher O, Hosseini SR, Hotz HR, Hulo C, Hundsrucker C, Ibberson M, Ilmjärv S, Ioannidis V, Ioannidis P, Iseli C, Ivanek R, Iwaszkiewicz J, Jacquet P, Jacquot M, Jagannathan V, Jan M, Jensen J, Johansson MU, Johner N, Jungo F, Junier T, Kahraman A, Katsantoni M, Keller G, Kerhornou A, Khalid F, Klingbiel D, Komljenovic A, Kriventseva E, Kryuchkova N, Kumar S, Kutalik Z, Kuznetsov D, Kuzyakiv R, Lane L, Lara V, Ledesma L, Leleu M, Lemercier P, Lew D, Lieberherr D, Liechti R, Lisacek F, Lischer H, Litsios G, Liu J, Lombardot T, Macé A, Maffioletti S, Mahi MA, Maiolo M, Majjigapu SR, Malmström L, Mangold V, Marek D, Mariethoz J, Marin R, Martin O, Martin X, Martín-Campos T, Mary C, Masclaux F, Masson P, Meier C, Messina A, Lenoir MM, Meyer X, Michel PA, Michielin O, Milanese A, Missiaglia E, Perez JM, Caria VM, Moret P, Moretti S, Morgat A, Mottaz A, Mottin L, Mouscaz Y, Mueller M, Murri R, Mylonas R, Neuenschwander S, Nikitin F, Niknejad A, Nouspikel N, Nso LN, Okoniewski M, Omasits U, Paccaud B, Pachkov M, Paesano SG, Pagni M, Palagi PM, Pasche E, Payne JL, Pedruzzi I, Peischl S, Peitsch M, Perlini S, Pilbout S, Podvinec M, Pohlmann R, Polizzi D, Potter D, Poux S, Pozzato M, Pradervand S, Praz V, Pruess M, Pujadas E, Racle J, Raschi M, Ratib O, Rausell A, de Laval VR, Redaschi N, Rempfer C, Ren G, Vahdati RA, Rib L, Grognuz OR, Altimiras ER, Rivoire C, Robin T, Robinson-Rechavi M, Rodrigues J, Roechert B, Roelli P, Romano V, Rossier G, Roth A, Rougemont J, Roux J, Royo H, Ruch P, Ruinelli M, Abdul Sater MR, Röhrig UF, Rüeger S, Salamin N, Sankar M, Sarkar N, Saxenhofer M, Schaeffer M, Schaerli Y, Schaper E, Schmid A, Schmid E, Schmid C, Schmid M, Schmidt S, Schmocker D, Schneider M, Schuepbach T, Schwede T, Schütz F, Sengstag T, Serrano M, Sethi A, Shahmirzadi O, Sigrist C, Silvestro D, Neto FA, Simillion C, Simonovic M, Skunca N, Sluzek K, Soneson C, Sprouffske K, Stadler M, Staehli S, Stevenson B, Stockinger H, Straszewski J, Stricker T, Studer G, Stutz A, Suffiotti M, Sundaram S, Szklarczyk D, Szövenyi P, Tegenfeldt F, Teixeira D, Tellenbach S, Smith AA, Tognolli M, Topolsky I, Van Du Tran T, Tsantoulis P, Tzika AC, Agote AU, van Nimwegen E, von Mering C, Varadarajan A, Veranneman M, Verbregue L, Veuthey AL, Vishnyakova D, Vyas R, Wagner A, Walther D, Wan HW, Wang M, Waterhouse R, Waterhouse A, Wicki A, Wigger L, Wirapati P, Witschi U, Wyder S, Wyler K, Wüthrich D, Xenarios I, Yamada K, Yan Z, Yasrebi H, Zahn M, Zangger N, Zdobnov E, Zerzion D, Zoete V, Zoller S, Abriata L, Aebischer T, Akhmedov M, Meireles Filho AA, Andreozzi S, Appel N, Armand F, Arribas A, Asgari S, Ataman M, Audagnotto M, Aydin D, Bady P, Bank C, Barac D, Bargeton B, Barido-Sottani J, Barillari C, Bartha I, Bean A, Becker J, Beerenwinkel N, Bellement G, Benedetti F, Bergmann S, Berneche S, Bevers R, Biasse D, Bichsel M, Bieler J, Piccini AP, Boareto do Amaral M, Bolliger C, Boskova V, Brown A, Bryois J, Buil A, Cannavo R, Cardner M, Carelli FN, Carmona S, Cascione L, Chakrabarti A, Chaturvedi N, Choobdar S, Clivaz C, Constantinescu S, Corre T, Quezada DC, Croce R, Cuendet A, Cui J, Dainese R, Peraro MD, Dallavilla T, De Oliveira L, Delaleu N, Delaneau O, Deplancke B, Dharmarajan L, Diekmann M, Dimitrakopoulos C, Dimitriades-Schmutz B, Dimitrova YA, Dirmeier S, Dobay MP, Dougoud M, Duc J, Dumont G, du Plessis L, Dörr D, Elfstroem K, Elmer FJ, Ewing GB, Fanaswala I, Fellay J, Feller C, Fengos G, Ferrer A, Fiaux S, Field C, Finci I, Fofonjka A, Fonti G, Fried P, Frochaux M, Fuentes J, Galbusera L, Galimberti M, Garcia-Albornoz M, Garcia-Escudero R, Garieri M, Georgieva L, Ghiurcuta CG, Ghosh S, Gnann A, Gnuegge R, Golumbeanu M, Gomez H, Goudet J, Gruber AJ, Gruhl F, Guethe S, Guillot E, Guimarães J, Gumienny RW, Gunawan R, Gustafson K, Gypas F, Hadadi N, Hameri T, Hammer C, Heer F, Heller DM, Hersch M, Hofmann AL, Howald C, Hutter S, Iber D, Irwin K, Jahn K, Jedlinski D, Jethava V, Jorjani H, Julou T, Kaessmann H, Kalantzi A, Kanitz A, Kapopoulou A, Karamasioti E, Karimaddini Z, Keller I, Kiparissides A, Kohler M, Kousathanas A, Kuipers J, Kupczyk P, Kwee I, Kühnert D, Lakshmanan LN, Lamparter D, Lang B, Laurent S, Laurent S, Leigh D, Lin Y, Lindsay H, Link V, Linnik J, Liphardt T, Liu Y, Loetscher A, Luomi AO, Lykov K, Machlab D, Magnus C, Maillard-Wermelinger A, Malafeev A, Malaspinas AS, Parera RM, Manesso E, Manukyan L, Mapelli SN, Marbach D, Lopez MJ, Wynn MM, Martin G, Martins AF, Matthes K, Mazza C, McDaid A, Mermet J, Michos O, Milinkovitch MC, Misios A, Miskovic L, Mitov V, Mitra A, Mittal N, Montazeri H, Moret B, Naef F, Nair N, Nicolas DL, Nicolet S, Noh H, Nowicka M, Oeyaas O, Omidi S, Ongen H, Ormond L, Ottoz D, Panousis N, Gao NP, Modarres HP, Pečerska J, Vieira JP, Pivkin I, Planet E, Céspedes SP, Pradhan R, Prados J, Racko D, Radigois MF, Rasmussen D, Riba A, Rinn B, Rivoal M, Robinson M, Rossi S, Rudolf F, Rueedi R, Ruscheweyh HJ, Rybinski M, Rzepiela AJ, Sakoparnig T, San Román Rincón MM, Savoglidis G, Scepanovic P, Schaad O, Schleiss R, Schmich F, Schmid E, Schmidt R, Schulthess S, Schwalie PC, Seifert D, Seijo M, Shao M, Shim H, Singer J, Sobel J, Soh KC, Flitman RS, Soto S, Sousa V, Stadler T, Stasiak A, Stefani A, Steger Y, Stelling J, Stopka A, Stévant I, Sunnaker M, Syed AP, Tamo G, Tanaka S, Theiler G, Thorball CA, Thurnherr T, Ccenhua MR, Tidin O, Tokic M, Riera MT, Tomasini M, Tymoshenko S, Ud-Dean M, Urchueguia A, Quintero NV, Vinckenbosch L, Viñuela A, Vollmer J, Voordijk S, Wang J, Wang Z, Warnefors M, Weber LM, Wegmann D, Whitehead E, Wicky A, Widmer L, Ye M, Yerly F, Yeung J, Yordanov P, Zavolan M, Zehnder T, Zhang C, Zhou X, Zisaki A, Zoller B, Zollinger A.

Abstract

The SIB Swiss Institute of Bioinformatics (www.isb-sib.ch) provides world-class bioinformatics databases, software tools, services and training to the international life science community in academia and industry. These solutions allow life scientists to turn the exponentially growing amount of data into knowledge. Here, we provide an overview of SIB's resources and competence areas, with a strong focus on curated databases and SIB's most popular and widely used resources. In particular, SIB's Bioinformatics resource portal ExPASy features over 150 resources, including UniProtKB/Swiss-Prot, ENZYME, PROSITE, neXtProt, STRING, UniCarbKB, SugarBindDB, SwissRegulon, EPD, arrayMap, Bgee, SWISS-MODEL Repository, OMA, OrthoDB and other databases, which are briefly described in this article.

PMID:
26615188
PMCID:
PMC4702916
DOI:
10.1093/nar/gkv1310
[Indexed for MEDLINE]
Free PMC Article

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