Format

Send to

Choose Destination
Bioinformatics. 2010 May 15;26(10):1381-3. doi: 10.1093/bioinformatics/btq143. Epub 2010 Apr 5.

Payao: a community platform for SBML pathway model curation.

Author information

1
The Systems Biology Institute, Tokyo, Japan.

Abstract

SUMMARY:

Payao is a community-based, collaborative web service platform for gene-regulatory and biochemical pathway model curation. The system combines Web 2.0 technologies and online model visualization functions to enable a collaborative community to annotate and curate biological models. Payao reads the models in Systems Biology Markup Language format, displays them with CellDesigner, a process diagram editor, which complies with the Systems Biology Graphical Notation, and provides an interface for model enrichment (adding tags and comments to the models) for the access-controlled community members.

AVAILABILITY AND IMPLEMENTATION:

Freely available for model curation service at http://www.payaologue.org. Web site implemented in Seaser Framework 2.0 with S2Flex2, MySQL 5.0 and Tomcat 5.5, with all major browsers supported.

CONTACT:

kitano@sbi.jp

PMID:
20371497
PMCID:
PMC2865864
DOI:
10.1093/bioinformatics/btq143
[Indexed for MEDLINE]
Free PMC Article

Supplemental Content

Full text links

Icon for Silverchair Information Systems Icon for PubMed Central
Loading ...
Support Center