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Items: 15

1.

Oncogenic K-Ras regulates bioactive sphingolipids in a sphingosine kinase 1-dependent manner.

Gault CR, Eblen ST, Neumann CA, Hannun YA, Obeid LM.

J Biol Chem. 2012 Sep 14;287(38):31794-803. doi: 10.1074/jbc.M112.385765. Epub 2012 Jul 24.

2.

Histidine 103 in Fra2 is an iron-sulfur cluster ligand in the [2Fe-2S] Fra2-Grx3 complex and is required for in vivo iron signaling in yeast.

Li H, Mapolelo DT, Dingra NN, Keller G, Riggs-Gelasco PJ, Winge DR, Johnson MK, Outten CE.

J Biol Chem. 2011 Jan 7;286(1):867-76. doi: 10.1074/jbc.M110.184176. Epub 2010 Oct 26.

3.

Promotion of melanoma growth by the metabolic hormone leptin.

Ellerhorst JA, Diwan AH, Dang SM, Uffort DG, Johnson MK, Cooke CP, Grimm EA.

Oncol Rep. 2010 Apr;23(4):901-7.

4.

The yeast iron regulatory proteins Grx3/4 and Fra2 form heterodimeric complexes containing a [2Fe-2S] cluster with cysteinyl and histidyl ligation.

Li H, Mapolelo DT, Dingra NN, Naik SG, Lees NS, Hoffman BM, Riggs-Gelasco PJ, Huynh BH, Johnson MK, Outten CE.

Biochemistry. 2009 Oct 13;48(40):9569-81. doi: 10.1021/bi901182w.

5.

Iterative evaluation of the Health Level 7--Logical Observation Identifiers Names and Codes Clinical Document Ontology for representing clinical document names: a case report.

Hyun S, Shapiro JS, Melton G, Schlegel C, Stetson PD, Johnson SB, Bakken S.

J Am Med Inform Assoc. 2009 May-Jun;16(3):395-9. doi: 10.1197/jamia.M2821. Epub 2009 Mar 4.

6.

An unsupervised machine learning approach to segmentation of clinician-entered free text.

Wrenn JO, Stetson PD, Johnson SB.

AMIA Annu Symp Proc. 2007 Oct 11:811-5.

7.

Explanations for unsuccessful weight loss among bariatric surgery candidates.

Hwang KO, Childs JH, Goodrick GK, Aboughali WA, Thomas EJ, Johnson CW, Yu SC, Bernstam EV.

Obes Surg. 2009 Oct;19(10):1377-83. doi: 10.1007/s11695-008-9573-0. Epub 2008 Jun 10.

8.

Commonly cited website quality criteria are not effective at identifying inaccurate online information about breast cancer.

Bernstam EV, Walji MF, Sagaram S, Sagaram D, Johnson CW, Meric-Bernstam F.

Cancer. 2008 Mar 15;112(6):1206-13. doi: 10.1002/cncr.23308.

9.

An electronic health record based on structured narrative.

Johnson SB, Bakken S, Dine D, Hyun S, Mendonça E, Morrison F, Bright T, Van Vleck T, Wrenn J, Stetson P.

J Am Med Inform Assoc. 2008 Jan-Feb;15(1):54-64. Epub 2007 Oct 18.

10.

A model for evaluating interface terminologies.

Rosenbloom ST, Miller RA, Johnson KB, Elkin PL, Brown SH.

J Am Med Inform Assoc. 2008 Jan-Feb;15(1):65-76. Epub 2007 Oct 18.

11.

Topological analysis of large-scale biomedical terminology structures.

Bales ME, Lussier YA, Johnson SB.

J Am Med Inform Assoc. 2007 Nov-Dec;14(6):788-97. Epub 2007 Aug 21.

12.

Quality of weight loss advice on internet forums.

Hwang KO, Farheen K, Johnson CW, Thomas EJ, Barnes AS, Bernstam EV.

Am J Med. 2007 Jul;120(7):604-9.

13.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

ENCODE Project Consortium, Birney E, Stamatoyannopoulos JA, Dutta A, Guigó R, Gingeras TR, Margulies EH, Weng Z, Snyder M, Dermitzakis ET, Thurman RE, Kuehn MS, Taylor CM, Neph S, Koch CM, Asthana S, Malhotra A, Adzhubei I, Greenbaum JA, Andrews RM, Flicek P, Boyle PJ, Cao H, Carter NP, Clelland GK, Davis S, Day N, Dhami P, Dillon SC, Dorschner MO, Fiegler H, Giresi PG, Goldy J, Hawrylycz M, Haydock A, Humbert R, James KD, Johnson BE, Johnson EM, Frum TT, Rosenzweig ER, Karnani N, Lee K, Lefebvre GC, Navas PA, Neri F, Parker SC, Sabo PJ, Sandstrom R, Shafer A, Vetrie D, Weaver M, Wilcox S, Yu M, Collins FS, Dekker J, Lieb JD, Tullius TD, Crawford GE, Sunyaev S, Noble WS, Dunham I, Denoeud F, Reymond A, Kapranov P, Rozowsky J, Zheng D, Castelo R, Frankish A, Harrow J, Ghosh S, Sandelin A, Hofacker IL, Baertsch R, Keefe D, Dike S, Cheng J, Hirsch HA, Sekinger EA, Lagarde J, Abril JF, Shahab A, Flamm C, Fried C, Hackermüller J, Hertel J, Lindemeyer M, Missal K, Tanzer A, Washietl S, Korbel J, Emanuelsson O, Pedersen JS, Holroyd N, Taylor R, Swarbreck D, Matthews N, Dickson MC, Thomas DJ, Weirauch MT, Gilbert J, Drenkow J, Bell I, Zhao X, Srinivasan KG, Sung WK, Ooi HS, Chiu KP, Foissac S, Alioto T, Brent M, Pachter L, Tress ML, Valencia A, Choo SW, Choo CY, Ucla C, Manzano C, Wyss C, Cheung E, Clark TG, Brown JB, Ganesh M, Patel S, Tammana H, Chrast J, Henrichsen CN, Kai C, Kawai J, Nagalakshmi U, Wu J, Lian Z, Lian J, Newburger P, Zhang X, Bickel P, Mattick JS, Carninci P, Hayashizaki Y, Weissman S, Hubbard T, Myers RM, Rogers J, Stadler PF, Lowe TM, Wei CL, Ruan Y, Struhl K, Gerstein M, Antonarakis SE, Fu Y, Green ED, Karaöz U, Siepel A, Taylor J, Liefer LA, Wetterstrand KA, Good PJ, Feingold EA, Guyer MS, Cooper GM, Asimenos G, Dewey CN, Hou M, Nikolaev S, Montoya-Burgos JI, Löytynoja A, Whelan S, Pardi F, Massingham T, Huang H, Zhang NR, Holmes I, Mullikin JC, Ureta-Vidal A, Paten B, Seringhaus M, Church D, Rosenbloom K, Kent WJ, Stone EA; NISC Comparative Sequencing Program; Baylor College of Medicine Human Genome Sequencing Center; Washington University Genome Sequencing Center; Broad Institute; Children's Hospital Oakland Research Institute, Batzoglou S, Goldman N, Hardison RC, Haussler D, Miller W, Sidow A, Trinklein ND, Zhang ZD, Barrera L, Stuart R, King DC, Ameur A, Enroth S, Bieda MC, Kim J, Bhinge AA, Jiang N, Liu J, Yao F, Vega VB, Lee CW, Ng P, Shahab A, Yang A, Moqtaderi Z, Zhu Z, Xu X, Squazzo S, Oberley MJ, Inman D, Singer MA, Richmond TA, Munn KJ, Rada-Iglesias A, Wallerman O, Komorowski J, Fowler JC, Couttet P, Bruce AW, Dovey OM, Ellis PD, Langford CF, Nix DA, Euskirchen G, Hartman S, Urban AE, Kraus P, Van Calcar S, Heintzman N, Kim TH, Wang K, Qu C, Hon G, Luna R, Glass CK, Rosenfeld MG, Aldred SF, Cooper SJ, Halees A, Lin JM, Shulha HP, Zhang X, Xu M, Haidar JN, Yu Y, Ruan Y, Iyer VR, Green RD, Wadelius C, Farnham PJ, Ren B, Harte RA, Hinrichs AS, Trumbower H, Clawson H, Hillman-Jackson J, Zweig AS, Smith K, Thakkapallayil A, Barber G, Kuhn RM, Karolchik D, Armengol L, Bird CP, de Bakker PI, Kern AD, Lopez-Bigas N, Martin JD, Stranger BE, Woodroffe A, Davydov E, Dimas A, Eyras E, Hallgrímsdóttir IB, Huppert J, Zody MC, Abecasis GR, Estivill X, Bouffard GG, Guan X, Hansen NF, Idol JR, Maduro VV, Maskeri B, McDowell JC, Park M, Thomas PJ, Young AC, Blakesley RW, Muzny DM, Sodergren E, Wheeler DA, Worley KC, Jiang H, Weinstock GM, Gibbs RA, Graves T, Fulton R, Mardis ER, Wilson RK, Clamp M, Cuff J, Gnerre S, Jaffe DB, Chang JL, Lindblad-Toh K, Lander ES, Koriabine M, Nefedov M, Osoegawa K, Yoshinaga Y, Zhu B, de Jong PJ.

Nature. 2007 Jun 14;447(7146):799-816.

14.

Interface terminologies: facilitating direct entry of clinical data into electronic health record systems.

Rosenbloom ST, Miller RA, Johnson KB, Elkin PL, Brown SH.

J Am Med Inform Assoc. 2006 May-Jun;13(3):277-88. Epub 2006 Feb 24. Review.

15.

Searching for cancer-related information online: unintended retrieval of complementary and alternative medicine information.

Walji M, Sagaram S, Meric-Bernstam F, Johnson CW, Bernstam EV.

Int J Med Inform. 2005 Aug;74(7-8):685-93.

PMID:
16027034

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