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Items: 1 to 20 of 81

1.

TET2 Deficiency Causes Germinal Center Hyperplasia, Impairs Plasma Cell Differentiation, and Promotes B-cell Lymphomagenesis.

Dominguez PM, Ghamlouch H, Rosikiewicz W, Kumar P, Béguelin W, Fontán L, Rivas MA, Pawlikowska P, Armand M, Mouly E, Torres-Martin M, Doane AS, Calvo Fernandez MT, Durant M, Della-Valle V, Teater M, Cimmino L, Droin N, Tadros S, Motanagh S, Shih AH, Rubin MA, Tam W, Aifantis I, Levine RL, Elemento O, Inghirami G, Green MR, Figueroa ME, Bernard OA, Aoufouchi S, Li S, Shaknovich R, Melnick AM.

Cancer Discov. 2018 Dec;8(12):1632-1653. doi: 10.1158/2159-8290.CD-18-0657. Epub 2018 Oct 1.

PMID:
30274972
2.

Comparison of Highly and Weakly Virulent Dickeya solani Strains, With a View on the Pangenome and Panregulon of This Species.

Golanowska M, Potrykus M, Motyka-Pomagruk A, Kabza M, Bacci G, Galardini M, Bazzicalupo M, Makalowska I, Smalla K, Mengoni A, Hugouvieux-Cotte-Pattat N, Lojkowska E.

Front Microbiol. 2018 Aug 31;9:1940. doi: 10.3389/fmicb.2018.01940. eCollection 2018.

3.

Hypermethylation of TRIM59 and KLF14 Influences Cell Death Signaling in Familial Alzheimer's Disease.

Wezyk M, Spólnicka M, Pośpiech E, Pepłońska B, Zbieć-Piekarska R, Ilkowski J, Styczyńska M, Barczak A, Zboch M, Filipek-Gliszczynska A, Skrzypczak M, Ginalski K, Kabza M, Makałowska I, Barcikowska-Kotowicz M, Branicki W, Żekanowski C.

Oxid Med Cell Longev. 2018 Apr 4;2018:6918797. doi: 10.1155/2018/6918797. eCollection 2018.

4.

Overactive BRCA1 Affects Presenilin 1 in Induced Pluripotent Stem Cell-Derived Neurons in Alzheimer's Disease.

Wezyk M, Szybinska A, Wojsiat J, Szczerba M, Day K, Ronnholm H, Kele M, Berdynski M, Peplonska B, Fichna JP, Ilkowski J, Styczynska M, Barczak A, Zboch M, Filipek-Gliszczynska A, Bojakowski K, Skrzypczak M, Ginalski K, Kabza M, Makalowska I, Barcikowska-Kotowicz M, Wojda U, Falk A, Zekanowski C.

J Alzheimers Dis. 2018;62(1):175-202. doi: 10.3233/JAD-170830.

PMID:
29439343
5.

Natural antisense transcripts in diseases: From modes of action to targeted therapies.

Wanowska E, Kubiak MR, Rosikiewicz W, Makałowska I, Szcześniak MW.

Wiley Interdiscip Rev RNA. 2018 Mar;9(2). doi: 10.1002/wrna.1461. Epub 2018 Jan 17. Review.

6.

Transcriptional interference by small transcripts in proximal promoter regions.

Pande A, Brosius J, Makalowska I, Makalowski W, Raabe CA.

Nucleic Acids Res. 2018 Feb 16;46(3):1069-1088. doi: 10.1093/nar/gkx1242.

7.

RetrogeneDB-a database of plant and animal retrocopies.

Rosikiewicz W, Kabza M, Kosinski JG, Ciomborowska-Basheer J, Kubiak MR, Makalowska I.

Database (Oxford). 2017 Jan 1;2017. doi: 10.1093/database/bax038.

8.

OverGeneDB: a database of 5' end protein coding overlapping genes in human and mouse genomes.

Rosikiewicz W, Suzuki Y, Makalowska I.

Nucleic Acids Res. 2018 Jan 4;46(D1):D186-D193. doi: 10.1093/nar/gkx948.

9.

Protein-Coding Genes' Retrocopies and Their Functions.

Kubiak MR, Makałowska I.

Viruses. 2017 Apr 13;9(4). pii: E80. doi: 10.3390/v9040080. Review.

10.

Collagen synthesis disruption and downregulation of core elements of TGF-β, Hippo, and Wnt pathways in keratoconus corneas.

Kabza M, Karolak JA, Rydzanicz M, Szcześniak MW, Nowak DM, Ginter-Matuszewska B, Polakowski P, Ploski R, Szaflik JP, Gajecka M.

Eur J Hum Genet. 2017 May;25(5):582-590. doi: 10.1038/ejhg.2017.4. Epub 2017 Feb 1.

11.

KTCNlncDB-a first platform to investigate lncRNAs expressed in human keratoconus and non-keratoconus corneas.

Szczesniak MW, Kabza M, Karolak JA, Rydzanicz M, Nowak DM, Ginter-Matuszewska B, Polakowski P, Ploski R, Szaflik JP, Gajecka M.

Database (Oxford). 2017 Jan 10;2017. doi: 10.1093/database/baw168. Print 2017.

12.

Retroposition as a source of antisense long non-coding RNAs with possible regulatory functions.

Bryzghalov O, Szcześniak MW, Makałowska I.

Acta Biochim Pol. 2016;63(4):825-833. Epub 2016 Nov 2.

13.

Biological functions of natural antisense transcripts.

Rosikiewicz W, Makałowska I.

Acta Biochim Pol. 2016;63(4):665-673. Epub 2016 Oct 21. Review.

14.

Erratum to: A survey of best practices for RNA-seq data analysis.

Conesa A, Madrigal P, Tarazona S, Gomez-Cabrero D, Cervera A, McPherson A, Szcześniak MW, Gaffney DJ, Elo LL, Zhang X, Mortazavi A.

Genome Biol. 2016 Aug 26;17(1):181. No abstract available.

15.

Comparative genomic analysis of retrogene repertoire in two green algae Volvox carteri and Chlamydomonas reinhardtii.

Jąkalski M, Takeshita K, Deblieck M, Koyanagi KO, Makałowska I, Watanabe H, Makałowski W.

Biol Direct. 2016 Aug 4;11:35. doi: 10.1186/s13062-016-0138-1.

16.

lncRNA-RNA Interactions across the Human Transcriptome.

Szcześniak MW, Makałowska I.

PLoS One. 2016 Mar 1;11(3):e0150353. doi: 10.1371/journal.pone.0150353. eCollection 2016.

17.

siRNA release from pri-miRNA scaffolds is controlled by the sequence and structure of RNA.

Galka-Marciniak P, Olejniczak M, Starega-Roslan J, Szczesniak MW, Makalowska I, Krzyzosiak WJ.

Biochim Biophys Acta. 2016 Apr;1859(4):639-49. doi: 10.1016/j.bbagrm.2016.02.014. Epub 2016 Feb 26.

PMID:
26921501
18.

A survey of best practices for RNA-seq data analysis.

Conesa A, Madrigal P, Tarazona S, Gomez-Cabrero D, Cervera A, McPherson A, Szcześniak MW, Gaffney DJ, Elo LL, Zhang X, Mortazavi A.

Genome Biol. 2016 Jan 26;17:13. doi: 10.1186/s13059-016-0881-8. Review. Erratum in: Genome Biol. 2016;17(1):181.

19.

CANTATAdb: A Collection of Plant Long Non-Coding RNAs.

Szcześniak MW, Rosikiewicz W, Makałowska I.

Plant Cell Physiol. 2016 Jan;57(1):e8. doi: 10.1093/pcp/pcv201. Epub 2015 Dec 12.

20.

Genetic dosage and position effect of small supernumerary marker chromosome (sSMC) in human sperm nuclei in infertile male patient.

Olszewska M, Wanowska E, Kishore A, Huleyuk N, Georgiadis AP, Yatsenko AN, Mikula M, Zastavna D, Wiland E, Kurpisz M.

Sci Rep. 2015 Nov 30;5:17408. doi: 10.1038/srep17408.

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