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Items: 1 to 20 of 33

1.

Bright and photostable chemigenetic indicators for extended in vivo voltage imaging.

Abdelfattah AS, Kawashima T, Singh A, Novak O, Liu H, Shuai Y, Huang YC, Campagnola L, Seeman SC, Yu J, Zheng J, Grimm JB, Patel R, Friedrich J, Mensh BD, Paninski L, Macklin JJ, Murphy GJ, Podgorski K, Lin BJ, Chen TW, Turner GC, Liu Z, Koyama M, Svoboda K, Ahrens MB, Lavis LD, Schreiter ER.

Science. 2019 Aug 16;365(6454):699-704. doi: 10.1126/science.aav6416. Epub 2019 Aug 1.

PMID:
31371562
2.

A genetically encoded fluorescent sensor for in vivo imaging of GABA.

Marvin JS, Shimoda Y, Magloire V, Leite M, Kawashima T, Jensen TP, Kolb I, Knott EL, Novak O, Podgorski K, Leidenheimer NJ, Rusakov DA, Ahrens MB, Kullmann DM, Looger LL.

Nat Methods. 2019 Aug;16(8):763-770. doi: 10.1038/s41592-019-0471-2. Epub 2019 Jul 15.

PMID:
31308547
3.

Glia Accumulate Evidence that Actions Are Futile and Suppress Unsuccessful Behavior.

Mu Y, Bennett DV, Rubinov M, Narayan S, Yang CT, Tanimoto M, Mensh BD, Looger LL, Ahrens MB.

Cell. 2019 Jun 27;178(1):27-43.e19. doi: 10.1016/j.cell.2019.05.050. Epub 2019 Jun 20.

4.

Brain-wide circuit interrogation at the cellular level guided by online analysis of neuronal function.

Vladimirov N, Wang C, Höckendorf B, Pujala A, Tanimoto M, Mu Y, Yang CT, Wittenbach JD, Freeman J, Preibisch S, Koyama M, Keller PJ, Ahrens MB.

Nat Methods. 2018 Dec;15(12):1117-1125. doi: 10.1038/s41592-018-0221-x. Epub 2018 Nov 30.

PMID:
30504888
5.

Brain-wide Organization of Neuronal Activity and Convergent Sensorimotor Transformations in Larval Zebrafish.

Chen X, Mu Y, Hu Y, Kuan AT, Nikitchenko M, Randlett O, Chen AB, Gavornik JP, Sompolinsky H, Engert F, Ahrens MB.

Neuron. 2018 Nov 21;100(4):876-890.e5. doi: 10.1016/j.neuron.2018.09.042. Epub 2018 Oct 25.

PMID:
30473013
6.

Publisher Correction: A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters.

Piatkevich KD, Jung EE, Straub C, Linghu C, Park D, Suk HJ, Hochbaum DR, Goodwin D, Pnevmatikakis E, Pak N, Kawashima T, Yang CT, Rhoades JL, Shemesh O, Asano S, Yoon YG, Freifeld L, Saulnier JL, Riegler C, Engert F, Hughes T, Drobizhev M, Szabo B, Ahrens MB, Flavell SW, Sabatini BL, Boyden ES.

Nat Chem Biol. 2018 Sep;14(9):901. doi: 10.1038/s41589-018-0023-6.

PMID:
29520042
7.

Integrative whole-brain neuroscience in larval zebrafish.

Vanwalleghem GC, Ahrens MB, Scott EK.

Curr Opin Neurobiol. 2018 Jun;50:136-145. doi: 10.1016/j.conb.2018.02.004. Epub 2018 Mar 20. Review.

PMID:
29486425
8.

A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters.

Piatkevich KD, Jung EE, Straub C, Linghu C, Park D, Suk HJ, Hochbaum DR, Goodwin D, Pnevmatikakis E, Pak N, Kawashima T, Yang CT, Rhoades JL, Shemesh O, Asano S, Yoon YG, Freifeld L, Saulnier JL, Riegler C, Engert F, Hughes T, Drobizhev M, Szabo B, Ahrens MB, Flavell SW, Sabatini BL, Boyden ES.

Nat Chem Biol. 2018 Apr;14(4):352-360. doi: 10.1038/s41589-018-0004-9. Epub 2018 Feb 26. Erratum in: Nat Chem Biol. 2018 Mar 8;:.

9.

Multi-scale approaches for high-speed imaging and analysis of large neural populations.

Friedrich J, Yang W, Soudry D, Mu Y, Ahrens MB, Yuste R, Peterka DS, Paninski L.

PLoS Comput Biol. 2017 Aug 3;13(8):e1005685. doi: 10.1371/journal.pcbi.1005685. eCollection 2017 Aug.

10.

The Serotonergic System Tracks the Outcomes of Actions to Mediate Short-Term Motor Learning.

Kawashima T, Zwart MF, Yang CT, Mensh BD, Ahrens MB.

Cell. 2016 Nov 3;167(4):933-946.e20. doi: 10.1016/j.cell.2016.09.055. Epub 2016 Oct 27.

11.

A Practical Guide to Light Sheet Microscopy.

Bennett DV, Ahrens MB.

Methods Mol Biol. 2016;1451:321-31. doi: 10.1007/978-1-4939-3771-4_22.

PMID:
27464818
12.

Input-Specific Gain Modulation by Local Sensory Context Shapes Cortical and Thalamic Responses to Complex Sounds.

Williamson RS, Ahrens MB, Linden JF, Sahani M.

Neuron. 2016 Jul 20;91(2):467-81. doi: 10.1016/j.neuron.2016.05.041. Epub 2016 Jun 23.

13.

Sensitive red protein calcium indicators for imaging neural activity.

Dana H, Mohar B, Sun Y, Narayan S, Gordus A, Hasseman JP, Tsegaye G, Holt GT, Hu A, Walpita D, Patel R, Macklin JJ, Bargmann CI, Ahrens MB, Schreiter ER, Jayaraman V, Looger LL, Svoboda K, Kim DS.

Elife. 2016 Mar 24;5. pii: e12727. doi: 10.7554/eLife.12727.

14.

Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.

Dunn TW, Mu Y, Narayan S, Randlett O, Naumann EA, Yang CT, Schier AF, Freeman J, Engert F, Ahrens MB.

Elife. 2016 Mar 22;5:e12741. doi: 10.7554/eLife.12741.

15.

Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy.

Quirin S, Vladimirov N, Yang CT, Peterka DS, Yuste R, Ahrens MB.

Opt Lett. 2016 Mar 1;41(5):855-8. doi: 10.1364/OL.41.000855.

16.

Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish.

Dunn TW, Gebhardt C, Naumann EA, Riegler C, Ahrens MB, Engert F, Del Bene F.

Neuron. 2016 Feb 3;89(3):613-28. doi: 10.1016/j.neuron.2015.12.021. Epub 2016 Jan 21.

17.

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.

Pnevmatikakis EA, Soudry D, Gao Y, Machado TA, Merel J, Pfau D, Reardon T, Mu Y, Lacefield C, Yang W, Ahrens M, Bruno R, Jessell TM, Peterka DS, Yuste R, Paninski L.

Neuron. 2016 Jan 20;89(2):285-99. doi: 10.1016/j.neuron.2015.11.037. Epub 2016 Jan 7.

18.

Neural circuits. Labeling of active neural circuits in vivo with designed calcium integrators.

Fosque BF, Sun Y, Dana H, Yang CT, Ohyama T, Tadross MR, Patel R, Zlatic M, Kim DS, Ahrens MB, Jayaraman V, Looger LL, Schreiter ER.

Science. 2015 Feb 13;347(6223):755-60. doi: 10.1126/science.1260922.

19.

Visualizing whole-brain activity and development at the single-cell level using light-sheet microscopy.

Keller PJ, Ahrens MB.

Neuron. 2015 Feb 4;85(3):462-83. doi: 10.1016/j.neuron.2014.12.039. Review.

20.

Large-scale imaging in small brains.

Ahrens MB, Engert F.

Curr Opin Neurobiol. 2015 Jun;32:78-86. doi: 10.1016/j.conb.2015.01.007. Epub 2015 Jan 28. Review.

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