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Items: 1 to 20 of 81

1.

Large scale changes in the transcriptome of Eisenia fetida during regeneration.

Bhambri A, Dhaunta N, Patel SS, Hardikar M, Bhatt A, Srikakulam N, Shridhar S, Vellarikkal S, Pandey R, Jayarajan R, Verma A, Kumar V, Gautam P, Khanna Y, Khan JA, Fromm B, Peterson KJ, Scaria V, Sivasubbu S, Pillai B.

PLoS One. 2018 Sep 27;13(9):e0204234. doi: 10.1371/journal.pone.0204234. eCollection 2018.

2.

SAGE: a comprehensive resource of genetic variants integrating South Asian whole genomes and exomes.

Hariprakash JM, Vellarikkal SK, Verma A, Ranawat AS, Jayarajan R, Ravi R, Kumar A, Dixit V, Sivadas A, Kashyap AK, Senthivel V, Sehgal P, Mahadevan V, Scaria V, Sivasubbu S.

Database (Oxford). 2018 Jan 1;2018:1-10. doi: 10.1093/database/bay080.

3.

Genotype-Phenotype Correlations of Dystrophic Epidermolysis Bullosa in India: Experience from a Tertiary Care Centre.

Yenamandra VK, Vellarikkal SK, Chowdhury MR, Jayarajan R, Verma A, Scaria V, Sivasubbu S, Ray SB, Dinda AK, Kabra M, Sharma VK, Sethuraman G.

Acta Derm Venereol. 2018 Oct 10;98(9):873-879. doi: 10.2340/00015555-2929.

4.

A new strain of white spot syndrome virus affecting Litopenaeus vannamei in Indian shrimp farms.

Sivakumar S, Vimal S, Abdul Majeed S, Santhosh Kumar S, Taju G, Madan N, Rajkumar T, Thamizhvanan S, Shamsudheen KV, Scaria V, Sivasubbu S, Sahul Hameed AS.

J Fish Dis. 2018 Jul;41(7):1129-1146. doi: 10.1111/jfd.12811. Epub 2018 May 10.

PMID:
29745450
5.

A founder mutation MLC1 c.736delA associated with megalencephalic leukoencephalopathy with subcortical cysts-1 in north Indian kindred.

Vellarikkal SK, Jayarajan R, Verma A, Ravi R, Senthilvel V, Kumar A, Saini L, Gulati S, Lal M, Mathur A, Chhetri MK, Faruq M, Scaria V, Sivasubbu S.

Clin Genet. 2018 Aug;94(2):271-273. doi: 10.1111/cge.13251. Epub 2018 Apr 18. No abstract available.

PMID:
29667716
6.

Whole exome sequencing in a multi-generation family from India reveals a genetic variation c.10C>T (p.Gln4Ter) in keratin 5 gene associated with Dowling-Degos disease.

Virmani N, Vellarikkal SK, Verma A, Jayarajan R, Sakhiya J, Desai C, Sivasubbu S, Scaria V.

Indian J Dermatol Venereol Leprol. 2018 May-Jun;84(3):344-346. doi: 10.4103/ijdvl.IJDVL_268_17. No abstract available.

7.

Familial Hypertrophic Cardiomyopathy - Identification of cause and risk stratification through exome sequencing.

Biswas A, Das S, Kapoor M, Shamsudheen KV, Jayarajan R, Verma A, Seth S, Bhargava B, Scaria V, Sivasubbu S, Rao VR.

Gene. 2018 Jun 20;660:151-156. doi: 10.1016/j.gene.2018.03.062. Epub 2018 Mar 21.

PMID:
29572196
8.

Utility of whole-exome sequencing in detecting novel compound heterozygous mutations in COL7A1 among families with severe recessive dystrophic epidermolysis bullosa in India - implications on diagnosis, prognosis and prenatal testing.

Mahajan R, Vellarikkal SK, Handa S, Verma A, Jayarajan R, Kumar A, De D, Kaur J, Panigrahi I, Vineeth VS, Sivasubbu S, Scaria V.

J Eur Acad Dermatol Venereol. 2018 Mar 6. doi: 10.1111/jdv.14909. [Epub ahead of print] No abstract available.

PMID:
29512197
9.

Organellar transcriptome sequencing reveals mitochondrial localization of nuclear encoded transcripts.

Sabharwal A, Sharma D, Vellarikkal SK, Jayarajan R, Verma A, Senthivel V, Scaria V, Sivasubbu S.

Mitochondrion. 2018 Feb 24. pii: S1567-7249(17)30106-X. doi: 10.1016/j.mito.2018.02.007. [Epub ahead of print]

PMID:
29486245
10.

A G-quadruplex motif at the 3' end of sgRNAs improves CRISPR-Cas9 based genome editing efficiency.

Nahar S, Sehgal P, Azhar M, Rai M, Singh A, Sivasubbu S, Chakraborty D, Maiti S.

Chem Commun (Camb). 2018 Mar 7;54(19):2377-2380. doi: 10.1039/c7cc08893k. Epub 2018 Feb 16.

PMID:
29450416
11.

RNA secondary structure profiling in zebrafish reveals unique regulatory features.

Kaushik K, Sivadas A, Vellarikkal SK, Verma A, Jayarajan R, Pandey S, Sethi T, Maiti S, Scaria V, Sivasubbu S.

BMC Genomics. 2018 Feb 15;19(1):147. doi: 10.1186/s12864-018-4497-0.

12.

STIM1 activation of adenylyl cyclase 6 connects Ca2+ and cAMP signaling during melanogenesis.

Motiani RK, Tanwar J, Raja DA, Vashisht A, Khanna S, Sharma S, Srivastava S, Sivasubbu S, Natarajan VT, Gokhale RS.

EMBO J. 2018 Mar 1;37(5). pii: e97597. doi: 10.15252/embj.201797597. Epub 2018 Jan 8.

PMID:
29311116
13.

Pharmacogenetic landscape of DPYD variants in south Asian populations by integration of genome-scale data.

Hariprakash JM, Vellarikkal SK, Keechilat P, Verma A, Jayarajan R, Dixit V, Ravi R, Senthivel V, Kumar A, Sehgal P, Sonakar AK, Ambawat S, Giri AK, Philip A, Sivadas A, Faruq M, Bharadwaj D, Sivasubbu S, Scaria V.

Pharmacogenomics. 2018 Feb;19(3):227-241. doi: 10.2217/pgs-2017-0101. Epub 2017 Dec 14.

PMID:
29239269
14.

Case Report: Whole exome sequencing identifies variation c.2308G>A p.E770K in RAG1 associated with B- T- NK+ severe combined immunodeficiency.

Govindaraj GM, Karuthedath Vellarikkal S, Jayarajan R, Ravi R, Verma A, Chakkiyar K, Jayakrishnan MP, Arakkal R, Raj R, Kunnaruvath R, Sivasubbu S, Scaria V.

Version 2. F1000Res. 2016 Oct 18 [revised 2017 Jan 1];5:2532. doi: 10.12688/f1000research.9473.2. eCollection 2016.

15.

Case Report: Whole exome sequencing identifies a novel frameshift insertion c.1325dupT (p.F442fsX2) in the tyrosine kinase domain of BTK gene in a young Indian individual with X-linked agammaglobulinemia.

Rawat A, Karuthedath Vellarikkal S, Verma A, Jayarajan R, Gupta A, Singh S, Chopra A, Kumar R, Scaria V, Sivasubbu S.

Version 2. F1000Res. 2016 Nov 14 [revised 2017 Jan 1];5:2667. doi: 10.12688/f1000research.9472.2. eCollection 2016.

16.

RNA sequencing of db/db mice liver identifies lncRNA H19 as a key regulator of gluconeogenesis and hepatic glucose output.

Goyal N, Sivadas A, Shamsudheen KV, Jayarajan R, Verma A, Sivasubbu S, Scaria V, Datta M.

Sci Rep. 2017 Aug 16;7(1):8312. doi: 10.1038/s41598-017-08281-7.

17.

Classical autophagy proteins LC3B and ATG4B facilitate melanosome movement on cytoskeletal tracks.

Ramkumar A, Murthy D, Raja DA, Singh A, Krishnan A, Khanna S, Vats A, Thukral L, Sharma P, Sivasubbu S, Rani R, Natarajan VT, Gokhale RS.

Autophagy. 2017 Aug 3;13(8):1331-1347. doi: 10.1080/15548627.2017.1327509. Epub 2017 Jun 9.

18.

Neuroanatomical demonstration of calbindin 2a- and calbindin 2b-like calcium binding proteins in the early embryonic development of zebrafish: mRNA study.

Bhoyar RC, Jadhao AG, Sivasubbu S, Singh AR, Sabharwal A, Palande NV, Biswas S.

Int J Dev Neurosci. 2017 Aug;60:26-33. doi: 10.1016/j.ijdevneu.2017.03.012. Epub 2017 Apr 8.

PMID:
28396290
19.

Effects of nicotine on zebrafish: A comparative response between a newly established gill cell line and whole gills.

Nathiga Nambi KS, Abdul Majeed S, Taju G, Sivasubbu S, Sarath Babu V, Sahul Hameed AS.

Comp Biochem Physiol C Toxicol Pharmacol. 2017 May;195:68-77. doi: 10.1016/j.cbpc.2017.02.013. Epub 2017 Feb 28.

PMID:
28257922
20.

Egyptian tale from India: application of whole-exome sequencing in diagnosis of atypical familial Mediterranean fever.

Sandhya P, Vellarikkal SK, Nair A, Ravi R, Mathew J, Jayarajan R, Kumar A, Verma A, Sivadas A, Danda D, Sivasubbu S, Scaria V.

Int J Rheum Dis. 2017 Nov;20(11):1770-1775. doi: 10.1111/1756-185X.13042. Epub 2017 Feb 17.

PMID:
28211254

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