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Items: 16

1.

Collapse and hybridization of RNA: view from replica technique approach.

Mamasakhlisov YSh, Bellucci S, Hayryan S, Caturyan H, Grigoryan Z, Hu CK.

Eur Phys J E Soft Matter. 2015 Sep;38(9):100. doi: 10.1140/epje/i2015-15100-x.

PMID:
26385736
2.

Solvent effects in the helix-coil transition model can explain the unusual biophysics of intrinsically disordered proteins.

Badasyan A, Mamasakhlisov YSh, Podgornik R, Parsegian VA.

J Chem Phys. 2015 Jul 7;143(1):014102. doi: 10.1063/1.4923292.

PMID:
26156460
3.

192 The helix-coil transition in two-component solvent in the frames of GMPC. Ligands effects on the characteristics of the transition.

Asatryan AV, Tonoyan SA, Mirtavoosi S, Mamasakhlisov YSh, Morozov VF.

J Biomol Struct Dyn. 2015;33 Suppl 1:126-7. doi: 10.1080/07391102.2015.1032829. No abstract available.

PMID:
26103402
4.

191 Helix-coil transitions in heteropolymers: the constrained annealing approach.

Tonoyan SA, Asatryan AV, Andriasyan AK, Mamasakhlisov YSh, Morozov VF.

J Biomol Struct Dyn. 2015;33 Suppl 1:126. doi: 10.1080/07391102.2015.1032828. No abstract available.

PMID:
26103401
5.

Theoretical treatment of helix-coil transition of complexes DNA with two different ligands having different binding parameters.

Karapetian AT, Grigoryan ZA, Mamasakhlisov YSh, Minasyants MV, Vardevanyan PO.

J Biomol Struct Dyn. 2016;34(1):201-5. doi: 10.1080/07391102.2015.1010584.

PMID:
25723721
6.

Unified description of solvent effects in the helix-coil transition.

Badasyan A, Tonoyan SA, Giacometti A, Podgornik R, Parsegian VA, Mamasakhlisov YSh, Morozov VF.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Feb;89(2):022723.

PMID:
25353524
7.

Reentrant melting of RNA with quenched sequence randomness.

Hayrapetyan GN, Iannelli F, Lekscha J, Morozov VF, Netz RR, Mamasakhlisov YSh.

Phys Rev Lett. 2014 Aug 8;113(6):068101.

PMID:
25148351
8.

Long charged macromolecule in an entropic trap with rough surfaces.

Mamasakhlisov YSh, Hayryan S, Hu CK.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Nov;86(5 Pt 1):051904.

PMID:
23214811
9.

Competition for hydrogen-bond formation in the helix-coil transition and protein folding.

Badasyan AV, Tonoyan ShA, Mamasakhlisov YSh, Giacometti A, Benight AS, Morozov VF.

Phys Rev E Stat Nonlin Soft Matter Phys. 2011 May;83(5 Pt 1):051903.

PMID:
21728568
10.

Microscopic formulation of the Zimm-Bragg model for the helix-coil transition.

Badasyan AV, Giacometti A, Mamasakhlisov YSh, Morozov VF, Benight AS.

Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Feb;81(2 Pt 1):021921.

PMID:
20365609
11.

DNA stretching and multivalent-cation-induced condensation.

Mamasakhlisov YSh, Todd BA, Badasyan AV, Mkrtchyan AV, Morozov VF, Parsegian VA.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Sep;80(3 Pt 1):031915.

PMID:
19905154
12.

Intersegment interactions and helix-coil transition within the generalized model of polypeptide chains approach.

Badasyan AV, Hayrapetyan GN, Tonoyan ShA, Mamasakhlisov YSh, Benight AS, Morozov VF.

J Chem Phys. 2009 Sep 21;131(11):115104. doi: 10.1063/1.3216564.

PMID:
19778153
13.

Two scale generalized model of polypeptide chains.

Badasyan AV, Tonoyan ShA, Tsarukyan AV, Mamasakhlisov YSh, Benight AS, Morozov VF.

J Chem Phys. 2008 May 21;128(19):195101. doi: 10.1063/1.2918732.

PMID:
18500899
14.

RNA folding in the presence of counterions.

Mamasakhlisov YSh, Hayryan S, Morozov VF, Hu CK.

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Jun;75(6 Pt 1):061907.

PMID:
17677300
15.

Random sequences with power-law correlations exhibit proteinlike behavior.

Mamasakhlisov YSh, Hayryan S, Hu CK.

J Chem Phys. 2007 Apr 14;126(14):145103.

PMID:
17444752
16.

Stacking and hydrogen bonding: DNA cooperativity at melting.

Morozov VF, Badasyan AV, Grigoryan AV, Sahakyan MA, Mamasakhlisov YSh.

Biopolymers. 2004 Dec 5;75(5):434-9.

PMID:
15468063
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