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Items: 1 to 20 of 21

1.

Comparison of phasing strategies for whole human genomes.

Choi Y, Chan AP, Kirkness E, Telenti A, Schork NJ.

PLoS Genet. 2018 Apr 5;14(4):e1007308. doi: 10.1371/journal.pgen.1007308. eCollection 2018 Apr.

2.

The blood DNA virome in 8,000 humans.

Moustafa A, Xie C, Kirkness E, Biggs W, Wong E, Turpaz Y, Bloom K, Delwart E, Nelson KE, Venter JC, Telenti A.

PLoS Pathog. 2017 Mar 22;13(3):e1006292. doi: 10.1371/journal.ppat.1006292. eCollection 2017 Mar.

3.

Analysis of whole genome sequences of 16 strains of rubella virus from the United States, 1961-2009.

Abernathy E, Chen MH, Bera J, Shrivastava S, Kirkness E, Zheng Q, Bellini W, Icenogle J.

Virol J. 2013 Jan 25;10:32. doi: 10.1186/1743-422X-10-32.

4.

Systems immunology of human malaria.

Tran TM, Samal B, Kirkness E, Crompton PD.

Trends Parasitol. 2012 Jun;28(6):248-57. doi: 10.1016/j.pt.2012.03.006. Epub 2012 May 15. Review.

5.

Origins of domestic dog in southern East Asia is supported by analysis of Y-chromosome DNA.

Ding ZL, Oskarsson M, Ardalan A, Angleby H, Dahlgren LG, Tepeli C, Kirkness E, Savolainen P, Zhang YP.

Heredity (Edinb). 2012 May;108(5):507-14. doi: 10.1038/hdy.2011.114. Epub 2011 Nov 23.

6.

The HuRef Browser: a web resource for individual human genomics.

Axelrod N, Lin Y, Ng PC, Stockwell TB, Crabtree J, Huang J, Kirkness E, Strausberg RL, Frazier ME, Venter JC, Kravitz S, Levy S.

Nucleic Acids Res. 2009 Jan;37(Database issue):D1018-24. doi: 10.1093/nar/gkn939. Epub 2008 Nov 26.

7.

Cloning and characterization of canine PAX6 and evaluation as a candidate gene in a canine model of aniridia.

Hunter LS, Sidjanin DJ, Hijar MV, Johnson JL, Kirkness E, Acland GM, Aguirre GD.

Mol Vis. 2007 Mar 26;13:431-42.

8.

Identification and characterization of canine microsatellite markers in cardiac genes.

Hackett SR, Jung SW, Kirkness E, Cruickshank J, Vikstrom KL, Moïse NS, Gunn TM.

Anim Genet. 2007 Feb;38(1):89-91. No abstract available.

PMID:
17257202
9.

Dog Y chromosomal DNA sequence: identification, sequencing and SNP discovery.

Natanaelsson C, Oskarsson MC, Angleby H, Lundeberg J, Kirkness E, Savolainen P.

BMC Genet. 2006 Oct 6;7:45.

10.

Radiation hybrid mapping of cataract genes in the dog.

Hunter LS, Sidjanin DJ, Johnson JL, Zangerl B, Galibert F, Andre C, Kirkness E, Talamas E, Acland GM, Aguirre GD.

Mol Vis. 2006 May 24;12:588-96.

11.

Genome sequence, comparative analysis and haplotype structure of the domestic dog.

Lindblad-Toh K, Wade CM, Mikkelsen TS, Karlsson EK, Jaffe DB, Kamal M, Clamp M, Chang JL, Kulbokas EJ 3rd, Zody MC, Mauceli E, Xie X, Breen M, Wayne RK, Ostrander EA, Ponting CP, Galibert F, Smith DR, DeJong PJ, Kirkness E, Alvarez P, Biagi T, Brockman W, Butler J, Chin CW, Cook A, Cuff J, Daly MJ, DeCaprio D, Gnerre S, Grabherr M, Kellis M, Kleber M, Bardeleben C, Goodstadt L, Heger A, Hitte C, Kim L, Koepfli KP, Parker HG, Pollinger JP, Searle SM, Sutter NB, Thomas R, Webber C, Baldwin J, Abebe A, Abouelleil A, Aftuck L, Ait-Zahra M, Aldredge T, Allen N, An P, Anderson S, Antoine C, Arachchi H, Aslam A, Ayotte L, Bachantsang P, Barry A, Bayul T, Benamara M, Berlin A, Bessette D, Blitshteyn B, Bloom T, Blye J, Boguslavskiy L, Bonnet C, Boukhgalter B, Brown A, Cahill P, Calixte N, Camarata J, Cheshatsang Y, Chu J, Citroen M, Collymore A, Cooke P, Dawoe T, Daza R, Decktor K, DeGray S, Dhargay N, Dooley K, Dooley K, Dorje P, Dorjee K, Dorris L, Duffey N, Dupes A, Egbiremolen O, Elong R, Falk J, Farina A, Faro S, Ferguson D, Ferreira P, Fisher S, FitzGerald M, Foley K, Foley C, Franke A, Friedrich D, Gage D, Garber M, Gearin G, Giannoukos G, Goode T, Goyette A, Graham J, Grandbois E, Gyaltsen K, Hafez N, Hagopian D, Hagos B, Hall J, Healy C, Hegarty R, Honan T, Horn A, Houde N, Hughes L, Hunnicutt L, Husby M, Jester B, Jones C, Kamat A, Kanga B, Kells C, Khazanovich D, Kieu AC, Kisner P, Kumar M, Lance K, Landers T, Lara M, Lee W, Leger JP, Lennon N, Leuper L, LeVine S, Liu J, Liu X, Lokyitsang Y, Lokyitsang T, Lui A, Macdonald J, Major J, Marabella R, Maru K, Matthews C, McDonough S, Mehta T, Meldrim J, Melnikov A, Meneus L, Mihalev A, Mihova T, Miller K, Mittelman R, Mlenga V, Mulrain L, Munson G, Navidi A, Naylor J, Nguyen T, Nguyen N, Nguyen C, Nguyen T, Nicol R, Norbu N, Norbu C, Novod N, Nyima T, Olandt P, O'Neill B, O'Neill K, Osman S, Oyono L, Patti C, Perrin D, Phunkhang P, Pierre F, Priest M, Rachupka A, Raghuraman S, Rameau R, Ray V, Raymond C, Rege F, Rise C, Rogers J, Rogov P, Sahalie J, Settipalli S, Sharpe T, Shea T, Sheehan M, Sherpa N, Shi J, Shih D, Sloan J, Smith C, Sparrow T, Stalker J, Stange-Thomann N, Stavropoulos S, Stone C, Stone S, Sykes S, Tchuinga P, Tenzing P, Tesfaye S, Thoulutsang D, Thoulutsang Y, Topham K, Topping I, Tsamla T, Vassiliev H, Venkataraman V, Vo A, Wangchuk T, Wangdi T, Weiand M, Wilkinson J, Wilson A, Yadav S, Yang S, Yang X, Young G, Yu Q, Zainoun J, Zembek L, Zimmer A, Lander ES.

Nature. 2005 Dec 8;438(7069):803-19.

PMID:
16341006
12.

Construction of a 2-Mb resolution BAC microarray for CGH analysis of canine tumors.

Thomas R, Scott A, Langford CF, Fosmire SP, Jubala CM, Lorentzen TD, Hitte C, Karlsson EK, Kirkness E, Ostrander EA, Galibert F, Lindblad-Toh K, Modiano JF, Breen M.

Genome Res. 2005 Dec;15(12):1831-7.

13.

Exclusion of candidate genes for canine SRY-negative XX sex reversal.

Kothapalli K, Kirkness E, Pujar S, Van Wormer R, Meyers-Wallen VN.

J Hered. 2005;96(7):759-63. Epub 2005 Nov 2.

PMID:
16267164
14.

Exclusion of Lhx9 as a candidate gene for Sry-negative XX sex reversal in the American cocker spaniel model.

Pujar S, Kothapalli KS, Kirkness E, Van Wormer RH, Meyers-Wallen VN.

J Hered. 2005 Jul-Aug;96(4):452-4. Epub 2005 Apr 6.

PMID:
15814894
15.

Detailed four-way comparative mapping and gene order analysis of the canine ctvm locus reveals evolutionary chromosome rearrangements.

Andelfinger G, Hitte C, Etter L, Guyon R, Bourque G, Tesler G, Pevzner P, Kirkness E, Galibert F, Benson DW.

Genomics. 2004 Jun;83(6):1053-62.

PMID:
15177558
16.

Assignment of 10 canine genes to the canine linkage and comparative maps.

Werner P, Raducha MG, Shin D, Ostrander EA, Kirkness E, Patterson DF, Henthorn PS.

Anim Genet. 2004 Jun;35(3):249-51. No abstract available.

PMID:
15147403
17.

Comparison of human chromosome 21 conserved nongenic sequences (CNGs) with the mouse and dog genomes shows that their selective constraint is independent of their genic environment.

Dermitzakis ET, Kirkness E, Schwarz S, Birney E, Reymond A, Antonarakis SE.

Genome Res. 2004 May;14(5):852-9. Epub 2004 Apr 12.

18.

Exclusion of PISRT1 as a candidate locus for canine Sry-negative XX sex reversal.

Kothapalli KS, Kirkness E, Natale LJ, Meyers-Wallen VN.

Anim Genet. 2003 Dec;34(6):467-9. No abstract available.

PMID:
14687082
19.

Comparison of the canine and human olfactory receptor gene repertoires.

Quignon P, Kirkness E, Cadieu E, Touleimat N, Guyon R, Renier C, Hitte C, André C, Fraser C, Galibert F.

Genome Biol. 2003;4(12):R80. Epub 2003 Nov 28.

20.

Evolutionary discrimination of mammalian conserved non-genic sequences (CNGs).

Dermitzakis ET, Reymond A, Scamuffa N, Ucla C, Kirkness E, Rossier C, Antonarakis SE.

Science. 2003 Nov 7;302(5647):1033-5. Epub 2003 Oct 2.

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