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Items: 1 to 20 of 375

1.

Experimental evolution for niche breadth in bacteriophage T4 highlights the importance of structural genes.

Pham JY, Ogbunugafor CB, Nguyen Ba AN, Hartl DL.

Microbiologyopen. 2020 Feb;9(2):e968. doi: 10.1002/mbo3.968. Epub 2019 Nov 28.

2.

Cohort Description of the Madagascar Health and Environmental Research-Antongil (MAHERY-Antongil) Study in Madagascar.

Golden CD, Borgerson C, Rice BL, Allen LH, Anjaranirina EJG, Barrett CB, Boateng G, Gephart JA, Hampel D, Hartl DL, Knippenberg E, Myers SS, Ralalason DH, Ramihantaniarivo H, Randriamady H, Shahab-Ferdows S, Vaitla B, Volkman SK, Vonona MA.

Front Nutr. 2019 Jul 19;6:109. doi: 10.3389/fnut.2019.00109. eCollection 2019.

3.

Reply to Velavan et al.: Polymorphisms of pfcoronin in natural populations: Implications for functional significance.

Sharma AI, Demas AR, Hartl DL, Wirth DF.

Proc Natl Acad Sci U S A. 2019 Jun 25;116(26):12613-12614. doi: 10.1073/pnas.1907920116. No abstract available.

4.

Chimeric dihydrofolate reductases display properties of modularity and biophysical diversity.

Rodrigues JV, Ogbunugafor CB, Hartl DL, Shakhnovich EI.

Protein Sci. 2019 Jul;28(7):1359-1367. doi: 10.1002/pro.3646. Epub 2019 May 30.

PMID:
31095809
5.

Limits to Compensatory Mutations: Insights from Temperature-Sensitive Alleles.

Tomala K, Zrebiec P, Hartl DL.

Mol Biol Evol. 2019 Sep 1;36(9):1874-1883. doi: 10.1093/molbev/msz110.

PMID:
31058959
6.

Proteostasis Environment Shapes Higher-Order Epistasis Operating on Antibiotic Resistance.

Guerrero RF, Scarpino SV, Rodrigues JV, Hartl DL, Ogbunugafor CB.

Genetics. 2019 Jun;212(2):565-575. doi: 10.1534/genetics.119.302138. Epub 2019 Apr 23.

7.

Mutations in Plasmodium falciparum actin-binding protein coronin confer reduced artemisinin susceptibility.

Demas AR, Sharma AI, Wong W, Early AM, Redmond S, Bopp S, Neafsey DE, Volkman SK, Hartl DL, Wirth DF.

Proc Natl Acad Sci U S A. 2018 Dec 11;115(50):12799-12804. doi: 10.1073/pnas.1812317115. Epub 2018 Nov 12.

8.

De Novo Mutations Resolve Disease Transmission Pathways in Clonal Malaria.

Redmond SN, MacInnis BM, Bopp S, Bei AK, Ndiaye D, Hartl DL, Wirth DF, Volkman SK, Neafsey DE.

Mol Biol Evol. 2018 Jul 1;35(7):1678-1689. doi: 10.1093/molbev/msy059.

9.

Dramatic Changes in Malaria Population Genetic Complexity in Dielmo and Ndiop, Senegal, Revealed Using Genomic Surveillance.

Bei AK, Niang M, Deme AB, Daniels RF, Sarr FD, Sokhna C, Talla C, Faye J, Diagne N, Doucoure S, Mboup S, Wirth DF, Tall A, Ndiaye D, Hartl DL, Volkman SK, Toure-Balde A.

J Infect Dis. 2018 Jan 30;217(4):622-627. doi: 10.1093/infdis/jix580.

10.

Modeling the genetic relatedness of Plasmodium falciparum parasites following meiotic recombination and cotransmission.

Wong W, Wenger EA, Hartl DL, Wirth DF.

PLoS Comput Biol. 2018 Jan 9;14(1):e1005923. doi: 10.1371/journal.pcbi.1005923. eCollection 2018 Jan.

11.

Cohort Profile: The Madagascar Health and Environmental Research (MAHERY) study in north-eastern Madagascar.

Golden CD, Anjaranirina EJG, Fernald LCH, Hartl DL, Kremen C, Milner DA Jr, Ralalason DH, Ramihantaniarivo H, Randriamady H, Rice BL, Vaitla B, Volkman SK, Vonona MA, Myers SS.

Int J Epidemiol. 2017 Dec 1;46(6):1747-1748d. doi: 10.1093/ije/dyx071. No abstract available.

12.

Genome-Wide Association Studies of Drug-Resistance Determinants.

Volkman SK, Herman J, Lukens AK, Hartl DL.

Trends Parasitol. 2017 Mar;33(3):214-230. doi: 10.1016/j.pt.2016.10.001. Epub 2016 Oct 27. Review.

PMID:
28179098
13.

Genetic relatedness analysis reveals the cotransmission of genetically related Plasmodium falciparum parasites in Thiès, Senegal.

Wong W, Griggs AD, Daniels RF, Schaffner SF, Ndiaye D, Bei AK, Deme AB, MacInnis B, Volkman SK, Hartl DL, Neafsey DE, Wirth DF.

Genome Med. 2017 Jan 24;9(1):5. doi: 10.1186/s13073-017-0398-0.

14.

Genetic evidence that the Makira region in northeastern Madagascar is a hotspot of malaria transmission.

Rice BL, Golden CD, Anjaranirina EJ, Botelho CM, Volkman SK, Hartl DL.

Malar J. 2016 Dec 20;15(1):596. doi: 10.1186/s12936-016-1644-4.

15.

A New Take on John Maynard Smith's Concept of Protein Space for Understanding Molecular Evolution.

Ogbunugafor CB, Hartl DL.

PLoS Comput Biol. 2016 Oct 13;12(10):e1005046. doi: 10.1371/journal.pcbi.1005046. eCollection 2016 Oct.

16.

Mosquito Vectors and the Globalization of Plasmodium falciparum Malaria.

Molina-Cruz A, Zilversmit MM, Neafsey DE, Hartl DL, Barillas-Mury C.

Annu Rev Genet. 2016 Nov 23;50:447-465. Epub 2016 Oct 3. Review.

PMID:
27732796
17.

Genotypic Context and Epistasis in Individuals and Populations.

Sackton TB, Hartl DL.

Cell. 2016 Jul 14;166(2):279-287. doi: 10.1016/j.cell.2016.06.047. Review.

18.

Neighboring genes for DNA-binding proteins rescue male sterility in Drosophila hybrids.

Liénard MA, Araripe LO, Hartl DL.

Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):E4200-7. doi: 10.1073/pnas.1608337113. Epub 2016 Jun 29.

19.

Biophysical principles predict fitness landscapes of drug resistance.

Rodrigues JV, Bershtein S, Li A, Lozovsky ER, Hartl DL, Shakhnovich EI.

Proc Natl Acad Sci U S A. 2016 Mar 15;113(11):E1470-8. doi: 10.1073/pnas.1601441113. Epub 2016 Feb 29. Erratum in: Proc Natl Acad Sci U S A. 2016 Mar 29;113(13):E1964.

20.

Adaptive Landscape by Environment Interactions Dictate Evolutionary Dynamics in Models of Drug Resistance.

Ogbunugafor CB, Wylie CS, Diakite I, Weinreich DM, Hartl DL.

PLoS Comput Biol. 2016 Jan 25;12(1):e1004710. doi: 10.1371/journal.pcbi.1004710. eCollection 2016 Jan.

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