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Items: 1 to 20 of 34

1.

Global characterization of the Dicer-like protein DrnB roles in miRNA biogenesis in the social amoeba Dictyostelium discoideum.

Liao Z, Kjellin J, Hoeppner MP, Grabherr M, Söderbom F.

RNA Biol. 2018 Jul 3. doi: 10.1080/15476286.2018.1481697. [Epub ahead of print]

PMID:
29966484
2.

Comparative omics and feeding manipulations in chicken indicate a shift of the endocrine role of visceral fat towards reproduction.

Bornelöv S, Seroussi E, Yosefi S, Benjamini S, Miyara S, Ruzal M, Grabherr M, Rafati N, Molin AM, Pendavis K, Burgess SC, Andersson L, Friedman-Einat M.

BMC Genomics. 2018 Apr 26;19(1):295. doi: 10.1186/s12864-018-4675-0.

3.

Reading and editing the Pleurodeles waltl genome reveals novel features of tetrapod regeneration.

Elewa A, Wang H, Talavera-López C, Joven A, Brito G, Kumar A, Hameed LS, Penrad-Mobayed M, Yao Z, Zamani N, Abbas Y, Abdullayev I, Sandberg R, Grabherr M, Andersson B, Simon A.

Nat Commun. 2017 Dec 22;8(1):2286. doi: 10.1038/s41467-017-01964-9.

4.

Characterization of the Giardia intestinalis secretome during interaction with human intestinal epithelial cells: The impact on host cells.

Ma'ayeh SY, Liu J, Peirasmaki D, Hörnaeus K, Bergström Lind S, Grabherr M, Bergquist J, Svärd SG.

PLoS Negl Trop Dis. 2017 Dec 11;11(12):e0006120. doi: 10.1371/journal.pntd.0006120. eCollection 2017 Dec.

5.

A practical guide to build de-novo assemblies for single tissues of non-model organisms: the example of a Neotropical frog.

Montero-Mendieta S, Grabherr M, Lantz H, De la Riva I, Leonard JA, Webster MT, Vilà C.

PeerJ. 2017 Sep 1;5:e3702. doi: 10.7717/peerj.3702. eCollection 2017.

6.

Evolution of the p53-MDM2 pathway.

Åberg E, Saccoccia F, Grabherr M, Ore WYJ, Jemth P, Hultqvist G.

BMC Evol Biol. 2017 Aug 3;17(1):177. doi: 10.1186/s12862-017-1023-y.

7.

PiiL: visualization of DNA methylation and gene expression data in gene pathways.

Moghadam BT, Zamani N, Komorowski J, Grabherr M.

BMC Genomics. 2017 Aug 2;18(1):571. doi: 10.1186/s12864-017-3950-9.

8.

Correspondence on Lovell et al.: identification of chicken genes previously assumed to be evolutionarily lost.

Bornelöv S, Seroussi E, Yosefi S, Pendavis K, Burgess SC, Grabherr M, Friedman-Einat M, Andersson L.

Genome Biol. 2017 Jun 14;18(1):112. doi: 10.1186/s13059-017-1231-1.

9.

microTaboo: a general and practical solution to the k-disjoint problem.

Al-Jaff M, Sandström E, Grabherr M.

BMC Bioinformatics. 2017 May 2;18(1):228. doi: 10.1186/s12859-017-1644-6.

10.

Thrombocytopaenia after aortic valve replacement with stented, stentless and sutureless bioprostheses.

Stanger O, Grabherr M, Gahl B, Longnus S, Meinitzer A, Fiedler M, Tevaearai H, Carrel T.

Eur J Cardiothorac Surg. 2017 Feb 1;51(2):340-346. doi: 10.1093/ejcts/ezw295. No abstract available.

PMID:
28186236
11.

Interactions of Freshwater Cyanobacteria with Bacterial Antagonists.

Osman OA, Beier S, Grabherr M, Bertilsson S.

Appl Environ Microbiol. 2017 Mar 17;83(7). pii: e02634-16. doi: 10.1128/AEM.02634-16. Print 2017 Apr 1.

12.

Freedom SOLO-Associated Thrombocytopaenia is Valve-Dependent and Not Due to In Vitro Pseudothrombocytopaenia.

Stanger O, Gahl B, Grabherr M, Krausler R, Longnus S, Meinitzer A, Cadamuro J.

Heart Lung Circ. 2017 Mar;26(3):268-275. doi: 10.1016/j.hlc.2016.07.002. Epub 2016 Aug 16.

PMID:
27592325
13.

Coordinated Changes in Gene Expression Throughout Encystation of Giardia intestinalis.

Einarsson E, Troell K, Hoeppner MP, Grabherr M, Ribacke U, Svärd SG.

PLoS Negl Trop Dis. 2016 Mar 25;10(3):e0004571. doi: 10.1371/journal.pntd.0004571. eCollection 2016 Mar.

14.

Draft Genome Sequence of the Cellulolytic Fungus Chaetomium globosum.

Cuomo CA, Untereiner WA, Ma LJ, Grabherr M, Birren BW.

Genome Announc. 2015 Feb 26;3(1). pii: e00021-15. doi: 10.1128/genomeA.00021-15.

15.

Evolution of Darwin's finches and their beaks revealed by genome sequencing.

Lamichhaney S, Berglund J, Almén MS, Maqbool K, Grabherr M, Martinez-Barrio A, Promerová M, Rubin CJ, Wang C, Zamani N, Grant BR, Grant PR, Webster MT, Andersson L.

Nature. 2015 Feb 19;518(7539):371-5. doi: 10.1038/nature14181. Epub 2015 Feb 11.

PMID:
25686609
16.

Function of Isolated Pancreatic Islets From Patients at Onset of Type 1 Diabetes: Insulin Secretion Can Be Restored After Some Days in a Nondiabetogenic Environment In Vitro: Results From the DiViD Study.

Krogvold L, Skog O, Sundström G, Edwin B, Buanes T, Hanssen KF, Ludvigsson J, Grabherr M, Korsgren O, Dahl-Jørgensen K.

Diabetes. 2015 Jul;64(7):2506-12. doi: 10.2337/db14-1911. Epub 2015 Feb 12.

17.

Genome and physiology of the ascomycete filamentous fungus Xeromyces bisporus, the most xerophilic organism isolated to date.

Leong SL, Lantz H, Pettersson OV, Frisvad JC, Thrane U, Heipieper HJ, Dijksterhuis J, Grabherr M, Pettersson M, Tellgren-Roth C, Schnürer J.

Environ Microbiol. 2015 Feb;17(2):496-513. doi: 10.1111/1462-2920.12596. Epub 2014 Oct 7.

PMID:
25142400
18.

Broad-scale phylogenomics provides insights into retrovirus-host evolution.

Hayward A, Grabherr M, Jern P.

Proc Natl Acad Sci U S A. 2013 Dec 10;110(50):20146-51. doi: 10.1073/pnas.1315419110. Epub 2013 Nov 25.

19.

Efficient cellular fractionation improves RNA sequencing analysis of mature and nascent transcripts from human tissues.

Zaghlool A, Ameur A, Nyberg L, Halvardson J, Grabherr M, Cavelier L, Feuk L.

BMC Biotechnol. 2013 Nov 13;13:99. doi: 10.1186/1472-6750-13-99.

20.

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis.

Haas BJ, Papanicolaou A, Yassour M, Grabherr M, Blood PD, Bowden J, Couger MB, Eccles D, Li B, Lieber M, MacManes MD, Ott M, Orvis J, Pochet N, Strozzi F, Weeks N, Westerman R, William T, Dewey CN, Henschel R, LeDuc RD, Friedman N, Regev A.

Nat Protoc. 2013 Aug;8(8):1494-512. doi: 10.1038/nprot.2013.084. Epub 2013 Jul 11.

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