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Items: 1 to 20 of 57

1.

i-motif structures in long cytosine-rich sequences found upstream of the promoter region of the SMARCA4 gene.

Benabou S, Aviñó A, Lyonnais S, González C, Eritja R, De Juan A, Gargallo R.

Biochimie. 2017 Sep;140:20-33. doi: 10.1016/j.biochi.2017.06.005. Epub 2017 Jun 12.

PMID:
28619677
2.

Stabilization of Telomeric I-Motif Structures by (2'S)-2'-Deoxy-2'-C-Methylcytidine Residues.

Aviñó A, Dellafiore M, Gargallo R, González C, Iribarren AM, Montserrat J, Eritja R.

Chembiochem. 2017 Jun 19;18(12):1123-1128. doi: 10.1002/cbic.201700112. Epub 2017 May 15.

PMID:
28407336
3.

Corrigendum: The human mitochondrial transcription factor A is a versatile G-quadruplex binding protein.

Lyonnais S, Tarrés-Solé A, Rubio-Cosials A, Cuppari A, Brito R, Jaumot J, Gargallo R, Vilaseca M, Silva C, Granzhan A, Teulade-Fichou MP, Eritja R, Solà M.

Sci Rep. 2017 Apr 6;7:45948. doi: 10.1038/srep45948. No abstract available.

4.

The human mitochondrial transcription factor A is a versatile G-quadruplex binding protein.

Lyonnais S, Tarrés-Solé A, Rubio-Cosials A, Cuppari A, Brito R, Jaumot J, Gargallo R, Vilaseca M, Silva C, Granzhan A, Teulade-Fichou MP, Eritja R, Solà M.

Sci Rep. 2017 Mar 9;7:43992. doi: 10.1038/srep43992.

5.

The effect of l-thymidine, acyclic thymine and 8-bromoguanine on the stability of model G-quadruplex structures.

Aviñó A, Mazzini S, Fàbrega C, Peñalver P, Gargallo R, Morales JC, Eritja R.

Biochim Biophys Acta. 2017 May;1861(5 Pt B):1205-1212. doi: 10.1016/j.bbagen.2016.09.030. Epub 2016 Oct 2.

6.

Understanding the effect of the nature of the nucleobase in the loops on the stability of the i-motif structure.

Benabou S, Garavís M, Lyonnais S, Eritja R, González C, Gargallo R.

Phys Chem Chem Phys. 2016 Mar 21;18(11):7997-8004. doi: 10.1039/c5cp07428b.

PMID:
26957024
7.

Nucleic Acid i-Motif Structures in Analytical Chemistry.

Alba JJ, Sadurní A, Gargallo R.

Crit Rev Anal Chem. 2016 Sep 2;46(5):443-54. doi: 10.1080/10408347.2016.1143347. Epub 2016 Mar 3. Review.

PMID:
26939549
8.

The Effect of Small Cosolutes that Mimic Molecular Crowding Conditions on the Stability of Triplexes Involving Duplex DNA.

Aviñó A, Mazzini S, Gargallo R, Eritja R.

Int J Mol Sci. 2016 Feb 5;17(2):211. doi: 10.3390/ijms17020211.

9.

The RNA Stem-Loop to G-Quadruplex Equilibrium Controls Mature MicroRNA Production inside the Cell.

Pandey S, Agarwala P, Jayaraj GG, Gargallo R, Maiti S.

Biochemistry. 2015 Dec 8;54(48):7067-78. doi: 10.1021/acs.biochem.5b00574. Epub 2015 Nov 19.

PMID:
26554903
10.

Chemometrics: an important tool for monitoring interactions of vitamin B7 with bovine serum albumin with the aim of developing an efficient biosensing system for the analysis of protein.

Gholivand MB, Jalalvand AR, Goicoechea HC, Gargallo R, Skov T.

Talanta. 2015 Jan;132:354-65. doi: 10.1016/j.talanta.2014.09.019. Epub 2014 Sep 28.

PMID:
25476318
11.

Combination of electrochemistry with chemometrics to introduce an efficient analytical method for simultaneous quantification of five opium alkaloids in complex matrices.

Gholivand MB, Jalalvand AR, Goicoechea HC, Gargallo R, Skov T, Paimard G.

Talanta. 2015 Jan;131:26-37. doi: 10.1016/j.talanta.2014.07.053. Epub 2014 Jul 26.

PMID:
25281069
12.

Hard/soft hybrid modeling of temperature-induced unfolding processes involving G-quadruplex and i-motif nucleic acid structures.

Gargallo R.

Anal Biochem. 2014 Dec 1;466:4-15. doi: 10.1016/j.ab.2014.08.008. Epub 2014 Aug 24.

PMID:
25159622
13.

Specific loop modifications of the thrombin-binding aptamer trigger the formation of parallel structures.

Aviñó A, Portella G, Ferreira R, Gargallo R, Mazzini S, Gabelica V, Orozco M, Eritja R.

FEBS J. 2014 Feb;281(4):1085-99. doi: 10.1111/febs.12670. Epub 2014 Jan 2.

14.

Solution equilibria of cytosine- and guanine-rich sequences near the promoter region of the n-myc gene that contain stable hairpins within lateral loops.

Benabou S, Ferreira R, Aviñó A, González C, Lyonnais S, Solà M, Eritja R, Jaumot J, Gargallo R.

Biochim Biophys Acta. 2014 Jan;1840(1):41-52. doi: 10.1016/j.bbagen.2013.08.028. Epub 2013 Sep 6.

15.

Structure and stability of human telomeric G-quadruplex with preclinical 9-amino acridines.

Ferreira R, Artali R, Benoit A, Gargallo R, Eritja R, Ferguson DM, Sham YY, Mazzini S.

PLoS One. 2013;8(3):e57701. doi: 10.1371/journal.pone.0057701. Epub 2013 Mar 15. Erratum in: PLoS One. 2013;8(12). doi:10.1371/annotation/e49600ba-2cfa-45c6-9984-2b337ad73add.

16.

Variable-temperature size exclusion chromatography for the study of the structural changes in g-quadruplex.

Benabou S, Eritja R, Gargallo R.

ISRN Biochem. 2013 Nov 10;2013:631875. doi: 10.1155/2013/631875. eCollection 2013.

17.

Porphyrin binding mechanism is altered by protonation at the loops in G-quadruplex DNA formed near the transcriptional activation site of the human c-kit gene.

Manaye S, Eritja R, Aviñó A, Jaumot J, Gargallo R.

Biochim Biophys Acta. 2012 Dec;1820(12):1987-96. doi: 10.1016/j.bbagen.2012.09.006. Epub 2012 Sep 18.

PMID:
23000573
18.

The effect on quadruplex stability of North-nucleoside derivatives in the loops of the thrombin-binding aptamer.

Aviñó A, Mazzini S, Ferreira R, Gargallo R, Marquez VE, Eritja R.

Bioorg Med Chem. 2012 Jul 15;20(14):4186-93. doi: 10.1016/j.bmc.2012.06.005. Epub 2012 Jun 9.

19.

Combination of chromatographic and chemometric methods to study the interactions between DNA strands.

Ruiz-Castelar S, Checa A, Gargallo R, Jaumot J.

Anal Chim Acta. 2012 Apr 13;722:34-42. doi: 10.1016/j.aca.2012.02.005. Epub 2012 Feb 13.

PMID:
22444532
20.

Experimental methods for studying the interactions between G-quadruplex structures and ligands.

Jaumot J, Gargallo R.

Curr Pharm Des. 2012;18(14):1900-16. Review.

PMID:
22376108

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