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Items: 1 to 20 of 79

1.

Ecological networks to unravel the routes to horizontal transposon transfers.

Venner S, Miele V, Terzian C, Biémont C, Daubin V, Feschotte C, Pontier D.

PLoS Biol. 2017 Feb 15;15(2):e2001536. doi: 10.1371/journal.pbio.2001536.

2.

Dynamics of genome size evolution in birds and mammals.

Kapusta A, Suh A, Feschotte C.

Proc Natl Acad Sci U S A. 2017 Feb 8. pii: 201616702. doi: 10.1073/pnas.1616702114. [Epub ahead of print]

3.

Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome.

Hamilton EP, Kapusta A, Huvos PE, Bidwell SL, Zafar N, Tang H, Hadjithomas M, Krishnakumar V, Badger JH, Caler EV, Russ C, Zeng Q, Fan L, Levin JZ, Shea T, Young SK, Hegarty R, Daza R, Gujja S, Wortman JR, Birren BW, Nusbaum C, Thomas J, Carey CM, Pritham EJ, Feschotte C, Noto T, Mochizuki K, Papazyan R, Taverna SD, Dear PH, Cassidy-Hanley DM, Xiong J, Miao W, Orias E, Coyne RS.

Elife. 2016 Nov 28;5. pii: e19090. doi: 10.7554/eLife.19090.

4.

Regulatory activities of transposable elements: from conflicts to benefits.

Chuong EB, Elde NC, Feschotte C.

Nat Rev Genet. 2017 Feb;18(2):71-86. doi: 10.1038/nrg.2016.139. Review.

PMID:
27867194
5.

Exploration of the Drosophila buzzatii transposable element content suggests underestimation of repeats in Drosophila genomes.

Rius N, Guillén Y, Delprat A, Kapusta A, Feschotte C, Ruiz A.

BMC Genomics. 2016 May 10;17:344. doi: 10.1186/s12864-016-2648-8.

6.

Regulatory evolution of innate immunity through co-option of endogenous retroviruses.

Chuong EB, Elde NC, Feschotte C.

Science. 2016 Mar 4;351(6277):1083-7. doi: 10.1126/science.aad5497.

7.

Cross-Species Transmission and Differential Fate of an Endogenous Retrovirus in Three Mammal Lineages.

Zhuo X, Feschotte C.

PLoS Pathog. 2015 Nov 12;11(11):e1005279. doi: 10.1371/journal.ppat.1005279.

8.

Genomic DNA transposition induced by human PGBD5.

Henssen AG, Henaff E, Jiang E, Eisenberg AR, Carson JR, Villasante CM, Ray M, Still E, Burns M, Gandara J, Feschotte C, Mason CE, Kentsis A.

Elife. 2015 Sep 25;4. pii: e10565. doi: 10.7554/eLife.10565.

9.

A call for benchmarking transposable element annotation methods.

Hoen DR, Hickey G, Bourque G, Casacuberta J, Cordaux R, Feschotte C, Fiston-Lavier AS, Hua-Van A, Hubley R, Kapusta A, Lerat E, Maumus F, Pollock DD, Quesneville H, Smit A, Wheeler TJ, Bureau TE, Blanchette M.

Mob DNA. 2015 Aug 4;6:13. doi: 10.1186/s13100-015-0044-6.

10.

DNA transposons have colonized the genome of the giant virus Pandoravirus salinus.

Sun C, Feschotte C, Wu Z, Mueller RL.

BMC Biol. 2015 Jun 12;13:38. doi: 10.1186/s12915-015-0145-1.

11.

Reviewer acknowledgement 2015.

Craig NL, Eikbush TH, Feschotte C, Levin H.

Mob DNA. 2015 Mar 26;6:6. doi: 10.1186/s13100-015-0036-6.

12.

Fighting fire with fire: endogenous retrovirus envelopes as restriction factors.

Malfavon-Borja R, Feschotte C.

J Virol. 2015 Apr;89(8):4047-50. doi: 10.1128/JVI.03653-14. Review.

13.

Ancient transposable elements transformed the uterine regulatory landscape and transcriptome during the evolution of mammalian pregnancy.

Lynch VJ, Nnamani MC, Kapusta A, Brayer K, Plaza SL, Mazur EC, Emera D, Sheikh SZ, Grützner F, Bauersachs S, Graf A, Young SL, Lieb JD, DeMayo FJ, Feschotte C, Wagner GP.

Cell Rep. 2015 Feb 3;10(4):551-61. doi: 10.1016/j.celrep.2014.12.052.

14.

Genomics of ecological adaptation in cactophilic Drosophila.

Guillén Y, Rius N, Delprat A, Williford A, Muyas F, Puig M, Casillas S, Ràmia M, Egea R, Negre B, Mir G, Camps J, Moncunill V, Ruiz-Ruano FJ, Cabrero J, de Lima LG, Dias GB, Ruiz JC, Kapusta A, Garcia-Mas J, Gut M, Gut IG, Torrents D, Camacho JP, Kuhn GC, Feschotte C, Clark AG, Betrán E, Barbadilla A, Ruiz A.

Genome Biol Evol. 2014 Dec 31;7(1):349-66. doi: 10.1093/gbe/evu291.

15.

Volatile evolution of long noncoding RNA repertoires: mechanisms and biological implications.

Kapusta A, Feschotte C.

Trends Genet. 2014 Oct;30(10):439-52. doi: 10.1016/j.tig.2014.08.004. Review.

16.

A comprehensive analysis of piRNAs from adult human testis and their relationship with genes and mobile elements.

Ha H, Song J, Wang S, Kapusta A, Feschotte C, Chen KC, Xing J.

BMC Genomics. 2014 Jul 1;15:545. doi: 10.1186/1471-2164-15-545.

17.

Spy: a new group of eukaryotic DNA transposons without target site duplications.

Han MJ, Xu HE, Zhang HH, Feschotte C, Zhang Z.

Genome Biol Evol. 2014 Jun 24;6(7):1748-57. doi: 10.1093/gbe/evu140.

18.

Recurrent horizontal transfers of Chapaev transposons in diverse invertebrate and vertebrate animals.

Zhang HH, Feschotte C, Han MJ, Zhang Z.

Genome Biol Evol. 2014 May 27;6(6):1375-86. doi: 10.1093/gbe/evu112.

19.

Genomic landscape of human, bat, and ex vivo DNA transposon integrations.

Campos-Sánchez R, Kapusta A, Feschotte C, Chiaromonte F, Makova KD.

Mol Biol Evol. 2014 Jul;31(7):1816-32. doi: 10.1093/molbev/msu138.

20.

Reviewer acknowledgement 2014.

Craig NL, Eickbush TH, Feschotte C, Levin HL.

Mob DNA. 2014 Feb 25;5(1):3. doi: 10.1186/1759-8753-5-3.

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