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Items: 13

1.

Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant.

Bremges A, Maus I, Belmann P, Eikmeyer F, Winkler A, Albersmeier A, Pühler A, Schlüter A, Sczyrba A.

Gigascience. 2015 Jul 30;4:33. doi: 10.1186/s13742-015-0073-6. eCollection 2015.

2.

Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions.

Stolze Y, Zakrzewski M, Maus I, Eikmeyer F, Jaenicke S, Rottmann N, Siebner C, Pühler A, Schlüter A.

Biotechnol Biofuels. 2015 Feb 8;8:14. doi: 10.1186/s13068-014-0193-8. eCollection 2015.

3.

Effect of the strain Bacillus amyloliquefaciens FZB42 on the microbial community in the rhizosphere of lettuce under field conditions analyzed by whole metagenome sequencing.

Kröber M, Wibberg D, Grosch R, Eikmeyer F, Verwaaijen B, Chowdhury SP, Hartmann A, Pühler A, Schlüter A.

Front Microbiol. 2014 May 27;5:252. doi: 10.3389/fmicb.2014.00252. eCollection 2014.

4.

Taxonomic Profiling and Metagenome Analysis of a Microbial Community from a Habitat Contaminated with Industrial Discharges.

Shah V, Zakrzewski M, Wibberg D, Eikmeyer F, Schlüter A, Madamwar D.

Microb Ecol. 2013 Jun 25. [Epub ahead of print]

PMID:
23797291
5.

Taxonomic profiling and metagenome analysis of a microbial community from a habitat contaminated with industrial discharges.

Shah V, Zakrzewski M, Wibberg D, Eikmeyer F, Schlüter A, Madamwar D.

Microb Ecol. 2013 Oct;66(3):533-50. doi: 10.1007/s00248-013-0244-x.

PMID:
23728164
6.

Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14.

Wibberg D, Jelonek L, Rupp O, Hennig M, Eikmeyer F, Goesmann A, Hartmann A, Borriss R, Grosch R, Pühler A, Schlüter A.

J Biotechnol. 2013 Aug 20;167(2):142-55. doi: 10.1016/j.jbiotec.2012.12.010. Epub 2012 Dec 29.

PMID:
23280342
7.
8.

Sequence of two plasmids from Clostridium perfringens chicken necrotic enteritis isolates and comparison with C. perfringens conjugative plasmids.

Parreira VR, Costa M, Eikmeyer F, Blom J, Prescott JF.

PLoS One. 2012;7(11):e49753. doi: 10.1371/journal.pone.0049753. Epub 2012 Nov 26.

9.

IncP-1β plasmids of Comamonas sp. and Delftia sp. strains isolated from a wastewater treatment plant mediate resistance to and decolorization of the triphenylmethane dye crystal violet.

Stolze Y, Eikmeyer F, Wibberg D, Brandis G, Karsten C, Krahn I, Schneiker-Bekel S, Viehöver P, Barsch A, Keck M, Top EM, Niehaus K, Schlüter A.

Microbiology. 2012 Aug;158(Pt 8):2060-72. doi: 10.1099/mic.0.059220-0. Epub 2012 May 31.

PMID:
22653947
10.

Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage.

Heinl S, Wibberg D, Eikmeyer F, Szczepanowski R, Blom J, Linke B, Goesmann A, Grabherr R, Schwab H, Pühler A, Schlüter A.

J Biotechnol. 2012 Oct 15;161(2):153-66. doi: 10.1016/j.jbiotec.2012.03.007. Epub 2012 Mar 20.

PMID:
22465289
11.

Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing.

Zakrzewski M, Goesmann A, Jaenicke S, Jünemann S, Eikmeyer F, Szczepanowski R, Al-Soud WA, Sørensen S, Pühler A, Schlüter A.

J Biotechnol. 2012 Apr 30;158(4):248-58. doi: 10.1016/j.jbiotec.2012.01.020. Epub 2012 Feb 8.

PMID:
22342600
12.

The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolution.

Eikmeyer F, Hadiati A, Szczepanowski R, Wibberg D, Schneiker-Bekel S, Rogers LM, Brown CJ, Top EM, Pühler A, Schlüter A.

Plasmid. 2012 Jul;68(1):13-24. doi: 10.1016/j.plasmid.2012.01.011. Epub 2012 Feb 2.

PMID:
22326849
13.

Sequencing and comparative analysis of IncP-1α antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions.

Szczepanowski R, Eikmeyer F, Harfmann J, Blom J, Rogers LM, Top EM, Schlüter A.

J Biotechnol. 2011 Aug 20;155(1):95-103. doi: 10.1016/j.jbiotec.2010.11.018. Epub 2010 Nov 27.

PMID:
21115076

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