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Items: 1 to 20 of 63

1.

Adaptation and conservation insights from the koala genome.

Johnson RN, O'Meally D, Chen Z, Etherington GJ, Ho SYW, Nash WJ, Grueber CE, Cheng Y, Whittington CM, Dennison S, Peel E, Haerty W, O'Neill RJ, Colgan D, Russell TL, Alquezar-Planas DE, Attenbrow V, Bragg JG, Brandies PA, Chong AY, Deakin JE, Di Palma F, Duda Z, Eldridge MDB, Ewart KM, Hogg CJ, Frankham GJ, Georges A, Gillett AK, Govendir M, Greenwood AD, Hayakawa T, Helgen KM, Hobbs M, Holleley CE, Heider TN, Jones EA, King A, Madden D, Graves JAM, Morris KM, Neaves LE, Patel HR, Polkinghorne A, Renfree MB, Robin C, Salinas R, Tsangaras K, Waters PD, Waters SA, Wright B, Wilkins MR, Timms P, Belov K.

Nat Genet. 2018 Aug;50(8):1102-1111. doi: 10.1038/s41588-018-0153-5. Epub 2018 Jul 2.

PMID:
29967444
2.

Chromosome Evolution in Marsupials.

Deakin JE.

Genes (Basel). 2018 Feb 6;9(2). pii: E72. doi: 10.3390/genes9020072. Review.

3.

Identification of candidate genes for devil facial tumour disease tumourigenesis.

Taylor RL, Zhang Y, Schöning JP, Deakin JE.

Sci Rep. 2017 Aug 18;7(1):8761. doi: 10.1038/s41598-017-08908-9.

4.

Chromosomal Speciation in the Genomics Era: Disentangling Phylogenetic Evolution of Rock-wallabies.

Potter S, Bragg JG, Blom MP, Deakin JE, Kirkpatrick M, Eldridge MD, Moritz C.

Front Genet. 2017 Feb 10;8:10. doi: 10.3389/fgene.2017.00010. eCollection 2017.

5.

Anchoring genome sequence to chromosomes of the central bearded dragon (Pogona vitticeps) enables reconstruction of ancestral squamate macrochromosomes and identifies sequence content of the Z chromosome.

Deakin JE, Edwards MJ, Patel H, O'Meally D, Lian J, Stenhouse R, Ryan S, Livernois AM, Azad B, Holleley CE, Li Q, Georges A.

BMC Genomics. 2016 Jun 10;17:447. doi: 10.1186/s12864-016-2774-3.

6.

Identification of interleukin genes in Pogona vitticeps using a de novo transcriptome assembly from RNA-seq data.

Livernois A, Hardy K, Domaschenz R, Papanicolaou A, Georges A, Sarre SD, Rao S, Ezaz T, Deakin JE.

Immunogenetics. 2016 Oct;68(9):719-31. doi: 10.1007/s00251-016-0922-1. Epub 2016 Jun 2.

PMID:
27255409
7.

Marsupials as models for understanding the role of chromosome rearrangements in evolution and disease.

Deakin JE, Kruger-Andrzejewska M.

Chromosoma. 2016 Sep;125(4):633-44. doi: 10.1007/s00412-016-0603-8. Epub 2016 Jun 3. Review.

PMID:
27255308
8.

Immunofluorescent staining reveals hypermethylation of microchromosomes in the central bearded dragon, Pogona vitticeps.

Domaschenz R, Livernois AM, Rao S, Ezaz T, Deakin JE.

Mol Cytogenet. 2015 Dec 30;8:104. doi: 10.1186/s13039-015-0208-6. eCollection 2015.

9.

Global DNA Methylation patterns on marsupial and devil facial tumour chromosomes.

Ingles ED, Deakin JE.

Mol Cytogenet. 2015 Oct 1;8:74. doi: 10.1186/s13039-015-0176-x. eCollection 2015.

10.

Implications of monotreme and marsupial chromosome evolution on sex determination and differentiation.

Deakin JE.

Gen Comp Endocrinol. 2017 Apr 1;244:130-138. doi: 10.1016/j.ygcen.2015.09.029. Epub 2015 Sep 30. Review.

PMID:
26431612
11.

A peculiar lamin in a peculiar mammal: Expression of lamin LIII in platypus (Ornithorhynchus anatinus).

Peter A, Khandekar S, Deakin JE, Stick R.

Eur J Cell Biol. 2015 Nov;94(11):522-30. doi: 10.1016/j.ejcb.2015.07.001. Epub 2015 Jul 14.

PMID:
26213206
12.

Marsupials and monotremes possess a novel family of MHC class I genes that is lost from the eutherian lineage.

Papenfuss AT, Feng ZP, Krasnec K, Deakin JE, Baker ML, Miller RD.

BMC Genomics. 2015 Jul 22;16:535. doi: 10.1186/s12864-015-1745-4.

13.

Pathogenesis and molecular biology of a transmissible tumor in the Tasmanian devil.

Bender HS, Marshall Graves JA, Deakin JE.

Annu Rev Anim Biosci. 2014 Feb;2:165-87. doi: 10.1146/annurev-animal-022513-114204. Epub 2013 Nov 18. Review.

PMID:
25384139
14.

Tracing the evolution of amniote chromosomes.

Deakin JE, Ezaz T.

Chromosoma. 2014 Jun;123(3):201-16. doi: 10.1007/s00412-014-0456-y. Epub 2014 Mar 25. Review.

15.

Sequence and gene content of a large fragment of a lizard sex chromosome and evaluation of candidate sex differentiating gene R-spondin 1.

Ezaz T, Azad B, O'Meally D, Young MJ, Matsubara K, Edwards MJ, Zhang X, Holleley CE, Deakin JE, Marshall Graves JA, Georges A, Edwards SV, Sarre SD.

BMC Genomics. 2013 Dec 17;14:899. doi: 10.1186/1471-2164-14-899.

16.

Reconstruction of the ancestral marsupial karyotype from comparative gene maps.

Deakin JE, Delbridge ML, Koina E, Harley N, Alsop AE, Wang C, Patel VS, Graves JA.

BMC Evol Biol. 2013 Nov 21;13:258. doi: 10.1186/1471-2148-13-258.

17.

In vivo function and evolution of the eutherian-specific pluripotency marker UTF1.

Nishimoto M, Katano M, Yamagishi T, Hishida T, Kamon M, Suzuki A, Hirasaki M, Nabeshima Y, Nabeshima Y, Katsura Y, Satta Y, Deakin JE, Graves JA, Kuroki Y, Ono R, Ishino F, Ema M, Takahashi S, Kato H, Okuda A.

PLoS One. 2013 Jul 9;8(7):e68119. doi: 10.1371/journal.pone.0068119. Print 2013.

18.

Independent evolution of transcriptional inactivation on sex chromosomes in birds and mammals.

Livernois AM, Waters SA, Deakin JE, Marshall Graves JA, Waters PD.

PLoS Genet. 2013;9(7):e1003635. doi: 10.1371/journal.pgen.1003635. Epub 2013 Jul 18.

19.

Exceptionally high conservation of the MHC class I-related gene, MR1, among mammals.

Tsukamoto K, Deakin JE, Graves JA, Hashimoto K.

Immunogenetics. 2013 Feb;65(2):115-24. doi: 10.1007/s00251-012-0666-5. Epub 2012 Nov 16.

PMID:
23229473
20.

Extreme telomere length dimorphism in the Tasmanian devil and related marsupials suggests parental control of telomere length.

Bender HS, Murchison EP, Pickett HA, Deakin JE, Strong MA, Conlan C, McMillan DA, Neumann AA, Greider CW, Hannon GJ, Reddel RR, Graves JA.

PLoS One. 2012;7(9):e46195. doi: 10.1371/journal.pone.0046195. Epub 2012 Sep 25.

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