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Items: 1 to 20 of 168


Sequence and Expression Differences Underlie Functional Specialization of Arabidopsis MicroRNAs miR159 and miR319.

Palatnik JF, Wollmann H, Schommer C, Schwab R, Boisbouvier J, Rodriguez R, Warthmann N, Allen E, Dezulian T, Huson D, Carrington JC, Weigel D.

Dev Cell. 2019 Oct 7;51(1):129. doi: 10.1016/j.devcel.2019.09.016. No abstract available.


Hiding in plain sight: New virus genomes discovered via a systematic analysis of fungal public transcriptomes.

Gilbert KB, Holcomb EE, Allscheid RL, Carrington JC.

PLoS One. 2019 Jul 24;14(7):e0219207. doi: 10.1371/journal.pone.0219207. eCollection 2019.


Functional dissection of the ARGONAUTE7 promoter.

Hoyer JS, Pruneda-Paz JL, Breton G, Hassert MA, Holcomb EE, Fowler H, Bauer KM, Mreen J, Kay SA, Carrington JC.

Plant Direct. 2019 Jan 2;3(1):e00102. doi: 10.1002/pld3.102. eCollection 2019 Jan.


Antiviral ARGONAUTEs Against Turnip Crinkle Virus Revealed by Image-Based Trait Analysis.

Zheng X, Fahlgren N, Abbasi A, Berry JC, Carrington JC.

Plant Physiol. 2019 Jul;180(3):1418-1435. doi: 10.1104/pp.19.00121. Epub 2019 May 1.


Simultaneous CRISPR/Cas9-mediated editing of cassava eIF4E isoforms nCBP-1 and nCBP-2 reduces cassava brown streak disease symptom severity and incidence.

Gomez MA, Lin ZD, Moll T, Chauhan RD, Hayden L, Renninger K, Beyene G, Taylor NJ, Carrington JC, Staskawicz BJ, Bart RS.

Plant Biotechnol J. 2019 Feb;17(2):421-434. doi: 10.1111/pbi.12987. Epub 2018 Oct 5.


Raspberry Pi-powered imaging for plant phenotyping.

Tovar JC, Hoyer JS, Lin A, Tielking A, Callen ST, Elizabeth Castillo S, Miller M, Tessman M, Fahlgren N, Carrington JC, Nusinow DA, Gehan MA.

Appl Plant Sci. 2018 Mar 31;6(3):e1031. doi: 10.1002/aps3.1031. eCollection 2018 Mar.


Differential response of cassava genotypes to infection by cassava mosaic geminiviruses.

Kuria P, Ilyas M, Ateka E, Miano D, Onguso J, Carrington JC, Taylor NJ.

Virus Res. 2017 Jan 2;227:69-81. doi: 10.1016/j.virusres.2016.09.022. Epub 2016 Sep 29.


Small RNA-Based Antiviral Defense in the Phytopathogenic Fungus Colletotrichum higginsianum.

Campo S, Gilbert KB, Carrington JC.

PLoS Pathog. 2016 Jun 2;12(6):e1005640. doi: 10.1371/journal.ppat.1005640. eCollection 2016 Jun.


Fast-forward generation of effective artificial small RNAs for enhanced antiviral defense in plants.

Carbonell A, Carrington JC, DarĂ²s JA.

RNA Dis. 2016;3(1). pii: e1130. Epub 2016 Jan 12.


Loss of CMD2-mediated resistance to cassava mosaic disease in plants regenerated through somatic embryogenesis.

Beyene G, Chauhan RD, Wagaba H, Moll T, Alicai T, Miano D, Carrington JC, Taylor NJ.

Mol Plant Pathol. 2016 Sep;17(7):1095-110. doi: 10.1111/mpp.12353. Epub 2016 Apr 5.


Preparation of Multiplexed Small RNA Libraries From Plants.

Gilbert KB, Fahlgren N, Kasschau KD, Chapman EJ, Carrington JC, Carbonell A.

Bio Protoc. 2014 Nov 5;4(21). pii: e1275.


CG gene body DNA methylation changes and evolution of duplicated genes in cassava.

Wang H, Beyene G, Zhai J, Feng S, Fahlgren N, Taylor NJ, Bart R, Carrington JC, Jacobsen SE, Ausin I.

Proc Natl Acad Sci U S A. 2015 Nov 3;112(44):13729-34. doi: 10.1073/pnas.1519067112. Epub 2015 Oct 19.


P-SAMS: a web site for plant artificial microRNA and synthetic trans-acting small interfering RNA design.

Fahlgren N, Hill ST, Carrington JC, Carbonell A.

Bioinformatics. 2016 Jan 1;32(1):157-8. doi: 10.1093/bioinformatics/btv534. Epub 2015 Sep 17.


Antiviral roles of plant ARGONAUTES.

Carbonell A, Carrington JC.

Curr Opin Plant Biol. 2015 Oct;27:111-7. doi: 10.1016/j.pbi.2015.06.013. Epub 2015 Jul 17. Review.


A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria.

Fahlgren N, Feldman M, Gehan MA, Wilson MS, Shyu C, Bryant DW, Hill ST, McEntee CJ, Warnasooriya SN, Kumar I, Ficor T, Turnipseed S, Gilbert KB, Brutnell TP, Carrington JC, Mockler TC, Baxter I.

Mol Plant. 2015 Oct 5;8(10):1520-35. doi: 10.1016/j.molp.2015.06.005. Epub 2015 Jun 20.


Highly specific gene silencing in a monocot species by artificial microRNAs derived from chimeric miRNA precursors.

Carbonell A, Fahlgren N, Mitchell S, Cox KL Jr, Reilly KC, Mockler TC, Carrington JC.

Plant J. 2015 Jun;82(6):1061-1075. doi: 10.1111/tpj.12835. Epub 2015 May 20.


Roles and programming of Arabidopsis ARGONAUTE proteins during Turnip mosaic virus infection.

Garcia-Ruiz H, Carbonell A, Hoyer JS, Fahlgren N, Gilbert KB, Takeda A, Giampetruzzi A, Garcia Ruiz MT, McGinn MG, Lowery N, Martinez Baladejo MT, Carrington JC.

PLoS Pathog. 2015 Mar 25;11(3):e1004755. doi: 10.1371/journal.ppat.1004755. eCollection 2015 Mar.


Correction. Arabidopsis RNA-dependent RNA polymerases and dicer-like proteins in antiviral defense and small interfering RNA biogenesis during Turnip mosaic virus infection.

Garcia-Ruiz H, Takeda A, Chapman EJ, Sullivan CM, Fahlgren N, Brempelis KJ, Carrington JC.

Plant Cell. 2015 Mar;27(3):944-5. doi: 10.1105/tpc.15.00204. Epub 2015 Mar 17. No abstract available.


ARGONAUTE PIWI domain and microRNA duplex structure regulate small RNA sorting in Arabidopsis.

Zhang X, Niu D, Carbonell A, Wang A, Lee A, Tun V, Wang Z, Carrington JC, Chang CE, Jin H.

Nat Commun. 2014 Nov 19;5:5468. doi: 10.1038/ncomms6468.


Specific argonautes selectively bind small RNAs derived from potato spindle tuber viroid and attenuate viroid accumulation in vivo.

Minoia S, Carbonell A, Di Serio F, Gisel A, Carrington JC, Navarro B, Flores R.

J Virol. 2014 Oct;88(20):11933-45. doi: 10.1128/JVI.01404-14. Epub 2014 Aug 6.

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